Protein ID | Ophio5|8070 |
Gene name | |
Location | scaffold_852:2128..3505 |
Strand | - |
Gene length (bp) | 1377 |
Transcript length (bp) | 1377 |
Coding sequence length (bp) | 1374 |
Protein length (aa) | 458 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00108 | Thiolase_N | Thiolase, N-terminal domain | 1.9E-16 | 9 | 231 |
PF02803 | Thiolase_C | Thiolase, C-terminal domain | 6.0E-11 | 275 | 372 |
PF08545 | ACP_syn_III | 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III | 2.3E-05 | 81 | 118 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q07598|NLTP_CHICK | Non-specific lipid-transfer protein (Fragment) OS=Gallus gallus GN=SCP2 PE=2 SV=1 | 6 | 395 | 3.0E-148 |
sp|O62742|NLTP_RABIT | Non-specific lipid-transfer protein OS=Oryctolagus cuniculus GN=SCP2 PE=1 SV=1 | 1 | 396 | 1.0E-146 |
sp|P11915|NLTP_RAT | Non-specific lipid-transfer protein OS=Rattus norvegicus GN=Scp2 PE=1 SV=3 | 9 | 396 | 9.0E-146 |
sp|P22307|NLTP_HUMAN | Non-specific lipid-transfer protein OS=Homo sapiens GN=SCP2 PE=1 SV=2 | 9 | 396 | 2.0E-145 |
sp|P32020|NLTP_MOUSE | Non-specific lipid-transfer protein OS=Mus musculus GN=Scp2 PE=1 SV=3 | 9 | 396 | 2.0E-144 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q07598|NLTP_CHICK | Non-specific lipid-transfer protein (Fragment) OS=Gallus gallus GN=SCP2 PE=2 SV=1 | 6 | 395 | 3.0E-148 |
sp|O62742|NLTP_RABIT | Non-specific lipid-transfer protein OS=Oryctolagus cuniculus GN=SCP2 PE=1 SV=1 | 1 | 396 | 1.0E-146 |
sp|P11915|NLTP_RAT | Non-specific lipid-transfer protein OS=Rattus norvegicus GN=Scp2 PE=1 SV=3 | 9 | 396 | 9.0E-146 |
sp|P22307|NLTP_HUMAN | Non-specific lipid-transfer protein OS=Homo sapiens GN=SCP2 PE=1 SV=2 | 9 | 396 | 2.0E-145 |
sp|P32020|NLTP_MOUSE | Non-specific lipid-transfer protein OS=Mus musculus GN=Scp2 PE=1 SV=3 | 9 | 396 | 2.0E-144 |
sp|P07857|NLTP_BOVIN | Non-specific lipid-transfer protein OS=Bos taurus GN=SCP2 PE=1 SV=2 | 3 | 396 | 4.0E-143 |
sp|G5EDP2|NLTP2_CAEEL | Non-specific lipid-transfer protein-like 2 OS=Caenorhabditis elegans GN=daf-22 PE=1 SV=1 | 1 | 396 | 6.0E-126 |
sp|O26884|Y793_METTH | Uncharacterized protein MTH_793 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_793 PE=4 SV=1 | 7 | 397 | 2.0E-53 |
sp|Q58944|Y1549_METJA | Uncharacterized protein MJ1549 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1549 PE=4 SV=1 | 7 | 394 | 2.0E-43 |
sp|P09110|THIK_HUMAN | 3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2 | 77 | 391 | 4.0E-09 |
sp|A8F2R3|FABH_RICM5 | 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Rickettsia massiliae (strain Mtu5) GN=fabH PE=3 SV=1 | 24 | 118 | 3.0E-07 |
sp|Q21KB1|FADA_SACD2 | 3-ketoacyl-CoA thiolase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=fadA PE=3 SV=1 | 66 | 353 | 4.0E-07 |
sp|Q05493|THIK_YARLI | 3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=POT1 PE=3 SV=1 | 60 | 391 | 9.0E-07 |
sp|A6TGM3|FADA_KLEP7 | 3-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=fadA PE=3 SV=1 | 77 | 353 | 1.0E-06 |
sp|P0C7L3|PAAJ_ECOLX | Beta-ketoadipyl-CoA thiolase OS=Escherichia coli GN=paaJ PE=3 SV=1 | 82 | 353 | 2.0E-06 |
sp|P0C7L2|PAAJ_ECOLI | 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase OS=Escherichia coli (strain K12) GN=paaJ PE=1 SV=1 | 82 | 353 | 2.0E-06 |
sp|C6DI66|FADA_PECCP | 3-ketoacyl-CoA thiolase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=fadA PE=3 SV=1 | 76 | 353 | 2.0E-06 |
sp|Q43935|CATF_ACIAD | Beta-ketoadipyl-CoA thiolase OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=catF PE=3 SV=1 | 75 | 353 | 3.0E-06 |
sp|P07871|THIKB_RAT | 3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=1 SV=2 | 77 | 365 | 3.0E-06 |
sp|Q1QUW9|FADA_CHRSD | 3-ketoacyl-CoA thiolase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=fadA PE=3 SV=1 | 77 | 365 | 4.0E-06 |
sp|Q1R467|FADA_ECOUT | 3-ketoacyl-CoA thiolase OS=Escherichia coli (strain UTI89 / UPEC) GN=fadA PE=3 SV=1 | 77 | 353 | 4.0E-06 |
sp|Q0TAL1|FADA_ECOL5 | 3-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadA PE=3 SV=1 | 77 | 353 | 4.0E-06 |
sp|Q8FBI3|FADA_ECOL6 | 3-ketoacyl-CoA thiolase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fadA PE=3 SV=1 | 77 | 353 | 4.0E-06 |
sp|A1AI32|FADA_ECOK1 | 3-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 / APEC GN=fadA PE=3 SV=1 | 77 | 353 | 5.0E-06 |
sp|B7LTZ0|FADA_ESCF3 | 3-ketoacyl-CoA thiolase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fadA PE=3 SV=1 | 77 | 353 | 5.0E-06 |
sp|Q8VCH0|THIKB_MOUSE | 3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=1 SV=1 | 77 | 365 | 5.0E-06 |
sp|Q4UK49|FABH_RICFE | 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=fabH PE=3 SV=1 | 24 | 118 | 5.0E-06 |
sp|P0A2H8|FADA_SALTI | 3-ketoacyl-CoA thiolase OS=Salmonella typhi GN=fadA PE=3 SV=1 | 77 | 353 | 6.0E-06 |
sp|Q57HM7|FADA_SALCH | 3-ketoacyl-CoA thiolase OS=Salmonella choleraesuis (strain SC-B67) GN=fadA PE=3 SV=1 | 77 | 353 | 6.0E-06 |
sp|Q5PKQ3|FADA_SALPA | 3-ketoacyl-CoA thiolase OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=fadA PE=3 SV=1 | 77 | 353 | 6.0E-06 |
sp|P0A2H7|FADA_SALTY | 3-ketoacyl-CoA thiolase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=fadA PE=1 SV=1 | 77 | 353 | 6.0E-06 |
sp|Q921H8|THIKA_MOUSE | 3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=1 SV=1 | 77 | 365 | 6.0E-06 |
sp|P21775|THIKA_RAT | 3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=1 SV=2 | 77 | 365 | 7.0E-06 |
sp|A8GTP2|FABH_RICRS | 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Rickettsia rickettsii (strain Sheila Smith) GN=fabH PE=3 SV=1 | 24 | 118 | 7.0E-06 |
sp|B0BV80|FABH_RICRO | 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Rickettsia rickettsii (strain Iowa) GN=fabH PE=3 SV=1 | 24 | 118 | 7.0E-06 |
sp|Q92GC1|FABH_RICCN | 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=fabH PE=3 SV=1 | 24 | 118 | 7.0E-06 |
sp|P21151|FADA_ECOLI | 3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12) GN=fadA PE=1 SV=3 | 77 | 353 | 9.0E-06 |
sp|Q3IJ24|FADA_PSEHT | 3-ketoacyl-CoA thiolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fadA PE=3 SV=1 | 77 | 397 | 9.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0004315 | 3-oxoacyl-[acyl-carrier-protein] synthase activity | Yes |
GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | Yes |
GO:0006633 | fatty acid biosynthetic process | Yes |
GO:0004312 | fatty acid synthase activity | No |
GO:0044255 | cellular lipid metabolic process | No |
GO:0008150 | biological_process | No |
GO:0006082 | organic acid metabolic process | No |
GO:0046394 | carboxylic acid biosynthetic process | No |
GO:0044238 | primary metabolic process | No |
GO:0016746 | acyltransferase activity | No |
GO:0043436 | oxoacid metabolic process | No |
GO:0044281 | small molecule metabolic process | No |
GO:1901576 | organic substance biosynthetic process | No |
GO:0044283 | small molecule biosynthetic process | No |
GO:0008152 | metabolic process | No |
GO:0044237 | cellular metabolic process | No |
GO:0003674 | molecular_function | No |
GO:0009058 | biosynthetic process | No |
GO:0016740 | transferase activity | No |
GO:0071704 | organic substance metabolic process | No |
GO:0009987 | cellular process | No |
GO:0032787 | monocarboxylic acid metabolic process | No |
GO:0006631 | fatty acid metabolic process | No |
GO:0072330 | monocarboxylic acid biosynthetic process | No |
GO:0006629 | lipid metabolic process | No |
GO:0019752 | carboxylic acid metabolic process | No |
GO:0008610 | lipid biosynthetic process | No |
GO:0016053 | organic acid biosynthetic process | No |
GO:0003824 | catalytic activity | No |
GO:0044249 | cellular biosynthetic process | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Peroxisome | Peroxisomal targeting signal | 0.3418 | 0.2078 | 0.0424 | 0.0097 | 0.3369 | 0.0726 | 0.0736 | 0.0322 | 0.0692 | 0.9783 |
Orthofinder run ID | 4 |
Orthogroup | 4033 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|8070 MTSTAKQSVYVLGVGMTKFVKPRGQIDYTELGLEASIKALLDAGINYDDVKQGVACYCYGDSTCGQRVLYQLGMT KIPVYNVNNNCSTGSTGLALARSLIAGGAADCVLVVGFEKMAAGSLSSNFTDRESPTGTTVAMMAATRGVERAPG AAQMFGNAGREYMERYGATASDMAEIARVNHAHSERNPYAQFRDAYTLDQILASPVVFAPLTKLQCCPTSDGGAA AVLVSRRFLDARPGLAARAVEVAGQCMATDAPSLFSRSAIDLMGFEMTQHAARTALAEAGIASGDVQVVELHDCF SANEMLTLDALGLSEPGKAHELVRRGDITYGGRFLVNPSGGLISKGHPLGATGIAQCAELVWHLRGWANNRAVPR TRYCLQHNLGLGGAVVVTVYRRPDGRDAPAVDDAEVGRLTGLGYNPAVEARGFTREQAASVRSRHATSDWALQDT MDKVQARF |
Coding | >Ophio5|8070 ATGACGTCGACGGCCAAGCAAAGCGTGTACGTGCTGGGCGTGGGCATGACCAAGTTCGTCAAGCCGCGCGGCCAG ATAGACTACACGGAGCTCGGCTTGGAAGCGTCCATCAAGGCGCTGCTGGACGCGGGGATCAACTATGACGACGTG AAGCAGGGCGTGGCATGCTACTGCTACGGCGACAGCACCTGCGGCCAGCGCGTCCTTTACCAGCTGGGCATGACC AAGATTCCCGTCTACAACGTCAACAACAACTGCTCGACCGGTAGCACGGGGCTGGCGCTGGCCCGGTCTCTGATC GCCGGCGGGGCCGCAGACTGCGTTCTCGTCGTCGGCTTCGAGAAGATGGCGGCCGGCAGCCTGTCGAGCAACTTT ACCGACAGGGAGAGTCCGACAGGCACGACGGTGGCCATGATGGCGGCCACCAGGGGCGTCGAGAGGGCTCCTGGC GCGGCGCAGATGTTTGGTAATGCTGGGCGAGAGTACATGGAGAGATACGGCGCGACGGCGTCGGACATGGCGGAG ATTGCCCGCGTCAACCACGCGCATTCAGAGCGCAATCCGTACGCGCAGTTTCGCGACGCCTACACGCTCGATCAG ATCCTCGCGTCGCCCGTCGTCTTTGCGCCGCTGACCAAGCTGCAATGCTGCCCGACGTCCGACGGGGGAGCGGCC GCCGTCCTCGTCTCGCGCCGTTTCCTCGATGCCCGGCCGGGCCTGGCGGCGAGGGCCGTCGAGGTGGCGGGTCAG TGCATGGCAACGGACGCGCCGAGCCTGTTCTCGCGCAGCGCCATTGACCTCATGGGCTTTGAGATGACGCAGCAC GCGGCGCGGACGGCGTTGGCCGAGGCGGGCATAGCGTCGGGGGATGTCCAGGTTGTCGAGCTTCACGACTGCTTC AGCGCCAACGAGATGCTCACGCTCGATGCCCTGGGACTGAGCGAGCCGGGAAAGGCGCACGAGCTGGTTCGTCGC GGAGACATCACCTACGGCGGACGCTTCCTCGTCAACCCGTCTGGAGGGCTCATCTCCAAGGGTCATCCGCTGGGG GCTACGGGCATCGCCCAGTGCGCCGAGCTGGTTTGGCATCTGCGCGGCTGGGCCAACAACCGGGCCGTGCCGAGG ACGCGTTACTGTCTGCAGCATAACCTCGGGCTGGGCGGCGCCGTCGTCGTCACCGTTTATCGTCGTCCGGATGGA CGCGATGCGCCCGCGGTGGACGATGCCGAGGTCGGCCGCCTGACGGGCTTGGGGTATAATCCTGCCGTCGAGGCT CGTGGCTTCACGCGCGAGCAGGCTGCTTCGGTGAGGAGCCGGCATGCGACCAGCGACTGGGCGCTGCAGGATACC ATGGACAAGGTGCAGGCGAGGTTT |
Transcript | >Ophio5|8070 ATGACGTCGACGGCCAAGCAAAGCGTGTACGTGCTGGGCGTGGGCATGACCAAGTTCGTCAAGCCGCGCGGCCAG ATAGACTACACGGAGCTCGGCTTGGAAGCGTCCATCAAGGCGCTGCTGGACGCGGGGATCAACTATGACGACGTG AAGCAGGGCGTGGCATGCTACTGCTACGGCGACAGCACCTGCGGCCAGCGCGTCCTTTACCAGCTGGGCATGACC AAGATTCCCGTCTACAACGTCAACAACAACTGCTCGACCGGTAGCACGGGGCTGGCGCTGGCCCGGTCTCTGATC GCCGGCGGGGCCGCAGACTGCGTTCTCGTCGTCGGCTTCGAGAAGATGGCGGCCGGCAGCCTGTCGAGCAACTTT ACCGACAGGGAGAGTCCGACAGGCACGACGGTGGCCATGATGGCGGCCACCAGGGGCGTCGAGAGGGCTCCTGGC GCGGCGCAGATGTTTGGTAATGCTGGGCGAGAGTACATGGAGAGATACGGCGCGACGGCGTCGGACATGGCGGAG ATTGCCCGCGTCAACCACGCGCATTCAGAGCGCAATCCGTACGCGCAGTTTCGCGACGCCTACACGCTCGATCAG ATCCTCGCGTCGCCCGTCGTCTTTGCGCCGCTGACCAAGCTGCAATGCTGCCCGACGTCCGACGGGGGAGCGGCC GCCGTCCTCGTCTCGCGCCGTTTCCTCGATGCCCGGCCGGGCCTGGCGGCGAGGGCCGTCGAGGTGGCGGGTCAG TGCATGGCAACGGACGCGCCGAGCCTGTTCTCGCGCAGCGCCATTGACCTCATGGGCTTTGAGATGACGCAGCAC GCGGCGCGGACGGCGTTGGCCGAGGCGGGCATAGCGTCGGGGGATGTCCAGGTTGTCGAGCTTCACGACTGCTTC AGCGCCAACGAGATGCTCACGCTCGATGCCCTGGGACTGAGCGAGCCGGGAAAGGCGCACGAGCTGGTTCGTCGC GGAGACATCACCTACGGCGGACGCTTCCTCGTCAACCCGTCTGGAGGGCTCATCTCCAAGGGTCATCCGCTGGGG GCTACGGGCATCGCCCAGTGCGCCGAGCTGGTTTGGCATCTGCGCGGCTGGGCCAACAACCGGGCCGTGCCGAGG ACGCGTTACTGTCTGCAGCATAACCTCGGGCTGGGCGGCGCCGTCGTCGTCACCGTTTATCGTCGTCCGGATGGA CGCGATGCGCCCGCGGTGGACGATGCCGAGGTCGGCCGCCTGACGGGCTTGGGGTATAATCCTGCCGTCGAGGCT CGTGGCTTCACGCGCGAGCAGGCTGCTTCGGTGAGGAGCCGGCATGCGACCAGCGACTGGGCGCTGCAGGATACC ATGGACAAGGTGCAGGCGAGGTTTTGA |
Gene | >Ophio5|8070 ATGACGTCGACGGCCAAGCAAAGCGTGTACGTGCTGGGCGTGGGCATGACCAAGTTCGTCAAGCCGCGCGGCCAG ATAGACTACACGGAGCTCGGCTTGGAAGCGTCCATCAAGGCGCTGCTGGACGCGGGGATCAACTATGACGACGTG AAGCAGGGCGTGGCATGCTACTGCTACGGCGACAGCACCTGCGGCCAGCGCGTCCTTTACCAGCTGGGCATGACC AAGATTCCCGTCTACAACGTCAACAACAACTGCTCGACCGGTAGCACGGGGCTGGCGCTGGCCCGGTCTCTGATC GCCGGCGGGGCCGCAGACTGCGTTCTCGTCGTCGGCTTCGAGAAGATGGCGGCCGGCAGCCTGTCGAGCAACTTT ACCGACAGGGAGAGTCCGACAGGCACGACGGTGGCCATGATGGCGGCCACCAGGGGCGTCGAGAGGGCTCCTGGC GCGGCGCAGATGTTTGGTAATGCTGGGCGAGAGTACATGGAGAGATACGGCGCGACGGCGTCGGACATGGCGGAG ATTGCCCGCGTCAACCACGCGCATTCAGAGCGCAATCCGTACGCGCAGTTTCGCGACGCCTACACGCTCGATCAG ATCCTCGCGTCGCCCGTCGTCTTTGCGCCGCTGACCAAGCTGCAATGCTGCCCGACGTCCGACGGGGGAGCGGCC GCCGTCCTCGTCTCGCGCCGTTTCCTCGATGCCCGGCCGGGCCTGGCGGCGAGGGCCGTCGAGGTGGCGGGTCAG TGCATGGCAACGGACGCGCCGAGCCTGTTCTCGCGCAGCGCCATTGACCTCATGGGCTTTGAGATGACGCAGCAC GCGGCGCGGACGGCGTTGGCCGAGGCGGGCATAGCGTCGGGGGATGTCCAGGTTGTCGAGCTTCACGACTGCTTC AGCGCCAACGAGATGCTCACGCTCGATGCCCTGGGACTGAGCGAGCCGGGAAAGGCGCACGAGCTGGTTCGTCGC GGAGACATCACCTACGGCGGACGCTTCCTCGTCAACCCGTCTGGAGGGCTCATCTCCAAGGGTCATCCGCTGGGG GCTACGGGCATCGCCCAGTGCGCCGAGCTGGTTTGGCATCTGCGCGGCTGGGCCAACAACCGGGCCGTGCCGAGG ACGCGTTACTGTCTGCAGCATAACCTCGGGCTGGGCGGCGCCGTCGTCGTCACCGTTTATCGTCGTCCGGATGGA CGCGATGCGCCCGCGGTGGACGATGCCGAGGTCGGCCGCCTGACGGGCTTGGGGTATAATCCTGCCGTCGAGGCT CGTGGCTTCACGCGCGAGCAGGCTGCTTCGGTGAGGAGCCGGCATGCGACCAGCGACTGGGCGCTGCAGGATACC ATGGACAAGGTGCAGGCGAGGTTTTGA |