Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8070
Gene name
Locationscaffold_852:2128..3505
Strand-
Gene length (bp)1377
Transcript length (bp)1377
Coding sequence length (bp)1374
Protein length (aa) 458

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00108 Thiolase_N Thiolase, N-terminal domain 1.9E-16 9 231
PF02803 Thiolase_C Thiolase, C-terminal domain 6.0E-11 275 372
PF08545 ACP_syn_III 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3E-05 81 118

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q07598|NLTP_CHICK Non-specific lipid-transfer protein (Fragment) OS=Gallus gallus GN=SCP2 PE=2 SV=1 6 395 3.0E-148
sp|O62742|NLTP_RABIT Non-specific lipid-transfer protein OS=Oryctolagus cuniculus GN=SCP2 PE=1 SV=1 1 396 1.0E-146
sp|P11915|NLTP_RAT Non-specific lipid-transfer protein OS=Rattus norvegicus GN=Scp2 PE=1 SV=3 9 396 9.0E-146
sp|P22307|NLTP_HUMAN Non-specific lipid-transfer protein OS=Homo sapiens GN=SCP2 PE=1 SV=2 9 396 2.0E-145
sp|P32020|NLTP_MOUSE Non-specific lipid-transfer protein OS=Mus musculus GN=Scp2 PE=1 SV=3 9 396 2.0E-144
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Swissprot ID Swissprot Description Start End E-value
sp|Q07598|NLTP_CHICK Non-specific lipid-transfer protein (Fragment) OS=Gallus gallus GN=SCP2 PE=2 SV=1 6 395 3.0E-148
sp|O62742|NLTP_RABIT Non-specific lipid-transfer protein OS=Oryctolagus cuniculus GN=SCP2 PE=1 SV=1 1 396 1.0E-146
sp|P11915|NLTP_RAT Non-specific lipid-transfer protein OS=Rattus norvegicus GN=Scp2 PE=1 SV=3 9 396 9.0E-146
sp|P22307|NLTP_HUMAN Non-specific lipid-transfer protein OS=Homo sapiens GN=SCP2 PE=1 SV=2 9 396 2.0E-145
sp|P32020|NLTP_MOUSE Non-specific lipid-transfer protein OS=Mus musculus GN=Scp2 PE=1 SV=3 9 396 2.0E-144
sp|P07857|NLTP_BOVIN Non-specific lipid-transfer protein OS=Bos taurus GN=SCP2 PE=1 SV=2 3 396 4.0E-143
sp|G5EDP2|NLTP2_CAEEL Non-specific lipid-transfer protein-like 2 OS=Caenorhabditis elegans GN=daf-22 PE=1 SV=1 1 396 6.0E-126
sp|O26884|Y793_METTH Uncharacterized protein MTH_793 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_793 PE=4 SV=1 7 397 2.0E-53
sp|Q58944|Y1549_METJA Uncharacterized protein MJ1549 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1549 PE=4 SV=1 7 394 2.0E-43
sp|P09110|THIK_HUMAN 3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2 77 391 4.0E-09
sp|A8F2R3|FABH_RICM5 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Rickettsia massiliae (strain Mtu5) GN=fabH PE=3 SV=1 24 118 3.0E-07
sp|Q21KB1|FADA_SACD2 3-ketoacyl-CoA thiolase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=fadA PE=3 SV=1 66 353 4.0E-07
sp|Q05493|THIK_YARLI 3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=POT1 PE=3 SV=1 60 391 9.0E-07
sp|A6TGM3|FADA_KLEP7 3-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=fadA PE=3 SV=1 77 353 1.0E-06
sp|P0C7L3|PAAJ_ECOLX Beta-ketoadipyl-CoA thiolase OS=Escherichia coli GN=paaJ PE=3 SV=1 82 353 2.0E-06
sp|P0C7L2|PAAJ_ECOLI 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase OS=Escherichia coli (strain K12) GN=paaJ PE=1 SV=1 82 353 2.0E-06
sp|C6DI66|FADA_PECCP 3-ketoacyl-CoA thiolase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=fadA PE=3 SV=1 76 353 2.0E-06
sp|Q43935|CATF_ACIAD Beta-ketoadipyl-CoA thiolase OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=catF PE=3 SV=1 75 353 3.0E-06
sp|P07871|THIKB_RAT 3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=1 SV=2 77 365 3.0E-06
sp|Q1QUW9|FADA_CHRSD 3-ketoacyl-CoA thiolase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=fadA PE=3 SV=1 77 365 4.0E-06
sp|Q1R467|FADA_ECOUT 3-ketoacyl-CoA thiolase OS=Escherichia coli (strain UTI89 / UPEC) GN=fadA PE=3 SV=1 77 353 4.0E-06
sp|Q0TAL1|FADA_ECOL5 3-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadA PE=3 SV=1 77 353 4.0E-06
sp|Q8FBI3|FADA_ECOL6 3-ketoacyl-CoA thiolase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fadA PE=3 SV=1 77 353 4.0E-06
sp|A1AI32|FADA_ECOK1 3-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 / APEC GN=fadA PE=3 SV=1 77 353 5.0E-06
sp|B7LTZ0|FADA_ESCF3 3-ketoacyl-CoA thiolase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fadA PE=3 SV=1 77 353 5.0E-06
sp|Q8VCH0|THIKB_MOUSE 3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=1 SV=1 77 365 5.0E-06
sp|Q4UK49|FABH_RICFE 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=fabH PE=3 SV=1 24 118 5.0E-06
sp|P0A2H8|FADA_SALTI 3-ketoacyl-CoA thiolase OS=Salmonella typhi GN=fadA PE=3 SV=1 77 353 6.0E-06
sp|Q57HM7|FADA_SALCH 3-ketoacyl-CoA thiolase OS=Salmonella choleraesuis (strain SC-B67) GN=fadA PE=3 SV=1 77 353 6.0E-06
sp|Q5PKQ3|FADA_SALPA 3-ketoacyl-CoA thiolase OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=fadA PE=3 SV=1 77 353 6.0E-06
sp|P0A2H7|FADA_SALTY 3-ketoacyl-CoA thiolase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=fadA PE=1 SV=1 77 353 6.0E-06
sp|Q921H8|THIKA_MOUSE 3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=1 SV=1 77 365 6.0E-06
sp|P21775|THIKA_RAT 3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=1 SV=2 77 365 7.0E-06
sp|A8GTP2|FABH_RICRS 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Rickettsia rickettsii (strain Sheila Smith) GN=fabH PE=3 SV=1 24 118 7.0E-06
sp|B0BV80|FABH_RICRO 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Rickettsia rickettsii (strain Iowa) GN=fabH PE=3 SV=1 24 118 7.0E-06
sp|Q92GC1|FABH_RICCN 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=fabH PE=3 SV=1 24 118 7.0E-06
sp|P21151|FADA_ECOLI 3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12) GN=fadA PE=1 SV=3 77 353 9.0E-06
sp|Q3IJ24|FADA_PSEHT 3-ketoacyl-CoA thiolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fadA PE=3 SV=1 77 397 9.0E-06
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GO

GO Term Description Terminal node
GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity Yes
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups Yes
GO:0006633 fatty acid biosynthetic process Yes
GO:0004312 fatty acid synthase activity No
GO:0044255 cellular lipid metabolic process No
GO:0008150 biological_process No
GO:0006082 organic acid metabolic process No
GO:0046394 carboxylic acid biosynthetic process No
GO:0044238 primary metabolic process No
GO:0016746 acyltransferase activity No
GO:0043436 oxoacid metabolic process No
GO:0044281 small molecule metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0044283 small molecule biosynthetic process No
GO:0008152 metabolic process No
GO:0044237 cellular metabolic process No
GO:0003674 molecular_function No
GO:0009058 biosynthetic process No
GO:0016740 transferase activity No
GO:0071704 organic substance metabolic process No
GO:0009987 cellular process No
GO:0032787 monocarboxylic acid metabolic process No
GO:0006631 fatty acid metabolic process No
GO:0072330 monocarboxylic acid biosynthetic process No
GO:0006629 lipid metabolic process No
GO:0019752 carboxylic acid metabolic process No
GO:0008610 lipid biosynthetic process No
GO:0016053 organic acid biosynthetic process No
GO:0003824 catalytic activity No
GO:0044249 cellular biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8070
MTSTAKQSVYVLGVGMTKFVKPRGQIDYTELGLEASIKALLDAGINYDDVKQGVACYCYGDSTCGQRVLYQLGMT
KIPVYNVNNNCSTGSTGLALARSLIAGGAADCVLVVGFEKMAAGSLSSNFTDRESPTGTTVAMMAATRGVERAPG
AAQMFGNAGREYMERYGATASDMAEIARVNHAHSERNPYAQFRDAYTLDQILASPVVFAPLTKLQCCPTSDGGAA
AVLVSRRFLDARPGLAARAVEVAGQCMATDAPSLFSRSAIDLMGFEMTQHAARTALAEAGIASGDVQVVELHDCF
SANEMLTLDALGLSEPGKAHELVRRGDITYGGRFLVNPSGGLISKGHPLGATGIAQCAELVWHLRGWANNRAVPR
TRYCLQHNLGLGGAVVVTVYRRPDGRDAPAVDDAEVGRLTGLGYNPAVEARGFTREQAASVRSRHATSDWALQDT
MDKVQARF
Coding >Ophio5|8070
ATGACGTCGACGGCCAAGCAAAGCGTGTACGTGCTGGGCGTGGGCATGACCAAGTTCGTCAAGCCGCGCGGCCAG
ATAGACTACACGGAGCTCGGCTTGGAAGCGTCCATCAAGGCGCTGCTGGACGCGGGGATCAACTATGACGACGTG
AAGCAGGGCGTGGCATGCTACTGCTACGGCGACAGCACCTGCGGCCAGCGCGTCCTTTACCAGCTGGGCATGACC
AAGATTCCCGTCTACAACGTCAACAACAACTGCTCGACCGGTAGCACGGGGCTGGCGCTGGCCCGGTCTCTGATC
GCCGGCGGGGCCGCAGACTGCGTTCTCGTCGTCGGCTTCGAGAAGATGGCGGCCGGCAGCCTGTCGAGCAACTTT
ACCGACAGGGAGAGTCCGACAGGCACGACGGTGGCCATGATGGCGGCCACCAGGGGCGTCGAGAGGGCTCCTGGC
GCGGCGCAGATGTTTGGTAATGCTGGGCGAGAGTACATGGAGAGATACGGCGCGACGGCGTCGGACATGGCGGAG
ATTGCCCGCGTCAACCACGCGCATTCAGAGCGCAATCCGTACGCGCAGTTTCGCGACGCCTACACGCTCGATCAG
ATCCTCGCGTCGCCCGTCGTCTTTGCGCCGCTGACCAAGCTGCAATGCTGCCCGACGTCCGACGGGGGAGCGGCC
GCCGTCCTCGTCTCGCGCCGTTTCCTCGATGCCCGGCCGGGCCTGGCGGCGAGGGCCGTCGAGGTGGCGGGTCAG
TGCATGGCAACGGACGCGCCGAGCCTGTTCTCGCGCAGCGCCATTGACCTCATGGGCTTTGAGATGACGCAGCAC
GCGGCGCGGACGGCGTTGGCCGAGGCGGGCATAGCGTCGGGGGATGTCCAGGTTGTCGAGCTTCACGACTGCTTC
AGCGCCAACGAGATGCTCACGCTCGATGCCCTGGGACTGAGCGAGCCGGGAAAGGCGCACGAGCTGGTTCGTCGC
GGAGACATCACCTACGGCGGACGCTTCCTCGTCAACCCGTCTGGAGGGCTCATCTCCAAGGGTCATCCGCTGGGG
GCTACGGGCATCGCCCAGTGCGCCGAGCTGGTTTGGCATCTGCGCGGCTGGGCCAACAACCGGGCCGTGCCGAGG
ACGCGTTACTGTCTGCAGCATAACCTCGGGCTGGGCGGCGCCGTCGTCGTCACCGTTTATCGTCGTCCGGATGGA
CGCGATGCGCCCGCGGTGGACGATGCCGAGGTCGGCCGCCTGACGGGCTTGGGGTATAATCCTGCCGTCGAGGCT
CGTGGCTTCACGCGCGAGCAGGCTGCTTCGGTGAGGAGCCGGCATGCGACCAGCGACTGGGCGCTGCAGGATACC
ATGGACAAGGTGCAGGCGAGGTTT
Transcript >Ophio5|8070
ATGACGTCGACGGCCAAGCAAAGCGTGTACGTGCTGGGCGTGGGCATGACCAAGTTCGTCAAGCCGCGCGGCCAG
ATAGACTACACGGAGCTCGGCTTGGAAGCGTCCATCAAGGCGCTGCTGGACGCGGGGATCAACTATGACGACGTG
AAGCAGGGCGTGGCATGCTACTGCTACGGCGACAGCACCTGCGGCCAGCGCGTCCTTTACCAGCTGGGCATGACC
AAGATTCCCGTCTACAACGTCAACAACAACTGCTCGACCGGTAGCACGGGGCTGGCGCTGGCCCGGTCTCTGATC
GCCGGCGGGGCCGCAGACTGCGTTCTCGTCGTCGGCTTCGAGAAGATGGCGGCCGGCAGCCTGTCGAGCAACTTT
ACCGACAGGGAGAGTCCGACAGGCACGACGGTGGCCATGATGGCGGCCACCAGGGGCGTCGAGAGGGCTCCTGGC
GCGGCGCAGATGTTTGGTAATGCTGGGCGAGAGTACATGGAGAGATACGGCGCGACGGCGTCGGACATGGCGGAG
ATTGCCCGCGTCAACCACGCGCATTCAGAGCGCAATCCGTACGCGCAGTTTCGCGACGCCTACACGCTCGATCAG
ATCCTCGCGTCGCCCGTCGTCTTTGCGCCGCTGACCAAGCTGCAATGCTGCCCGACGTCCGACGGGGGAGCGGCC
GCCGTCCTCGTCTCGCGCCGTTTCCTCGATGCCCGGCCGGGCCTGGCGGCGAGGGCCGTCGAGGTGGCGGGTCAG
TGCATGGCAACGGACGCGCCGAGCCTGTTCTCGCGCAGCGCCATTGACCTCATGGGCTTTGAGATGACGCAGCAC
GCGGCGCGGACGGCGTTGGCCGAGGCGGGCATAGCGTCGGGGGATGTCCAGGTTGTCGAGCTTCACGACTGCTTC
AGCGCCAACGAGATGCTCACGCTCGATGCCCTGGGACTGAGCGAGCCGGGAAAGGCGCACGAGCTGGTTCGTCGC
GGAGACATCACCTACGGCGGACGCTTCCTCGTCAACCCGTCTGGAGGGCTCATCTCCAAGGGTCATCCGCTGGGG
GCTACGGGCATCGCCCAGTGCGCCGAGCTGGTTTGGCATCTGCGCGGCTGGGCCAACAACCGGGCCGTGCCGAGG
ACGCGTTACTGTCTGCAGCATAACCTCGGGCTGGGCGGCGCCGTCGTCGTCACCGTTTATCGTCGTCCGGATGGA
CGCGATGCGCCCGCGGTGGACGATGCCGAGGTCGGCCGCCTGACGGGCTTGGGGTATAATCCTGCCGTCGAGGCT
CGTGGCTTCACGCGCGAGCAGGCTGCTTCGGTGAGGAGCCGGCATGCGACCAGCGACTGGGCGCTGCAGGATACC
ATGGACAAGGTGCAGGCGAGGTTTTGA
Gene >Ophio5|8070
ATGACGTCGACGGCCAAGCAAAGCGTGTACGTGCTGGGCGTGGGCATGACCAAGTTCGTCAAGCCGCGCGGCCAG
ATAGACTACACGGAGCTCGGCTTGGAAGCGTCCATCAAGGCGCTGCTGGACGCGGGGATCAACTATGACGACGTG
AAGCAGGGCGTGGCATGCTACTGCTACGGCGACAGCACCTGCGGCCAGCGCGTCCTTTACCAGCTGGGCATGACC
AAGATTCCCGTCTACAACGTCAACAACAACTGCTCGACCGGTAGCACGGGGCTGGCGCTGGCCCGGTCTCTGATC
GCCGGCGGGGCCGCAGACTGCGTTCTCGTCGTCGGCTTCGAGAAGATGGCGGCCGGCAGCCTGTCGAGCAACTTT
ACCGACAGGGAGAGTCCGACAGGCACGACGGTGGCCATGATGGCGGCCACCAGGGGCGTCGAGAGGGCTCCTGGC
GCGGCGCAGATGTTTGGTAATGCTGGGCGAGAGTACATGGAGAGATACGGCGCGACGGCGTCGGACATGGCGGAG
ATTGCCCGCGTCAACCACGCGCATTCAGAGCGCAATCCGTACGCGCAGTTTCGCGACGCCTACACGCTCGATCAG
ATCCTCGCGTCGCCCGTCGTCTTTGCGCCGCTGACCAAGCTGCAATGCTGCCCGACGTCCGACGGGGGAGCGGCC
GCCGTCCTCGTCTCGCGCCGTTTCCTCGATGCCCGGCCGGGCCTGGCGGCGAGGGCCGTCGAGGTGGCGGGTCAG
TGCATGGCAACGGACGCGCCGAGCCTGTTCTCGCGCAGCGCCATTGACCTCATGGGCTTTGAGATGACGCAGCAC
GCGGCGCGGACGGCGTTGGCCGAGGCGGGCATAGCGTCGGGGGATGTCCAGGTTGTCGAGCTTCACGACTGCTTC
AGCGCCAACGAGATGCTCACGCTCGATGCCCTGGGACTGAGCGAGCCGGGAAAGGCGCACGAGCTGGTTCGTCGC
GGAGACATCACCTACGGCGGACGCTTCCTCGTCAACCCGTCTGGAGGGCTCATCTCCAAGGGTCATCCGCTGGGG
GCTACGGGCATCGCCCAGTGCGCCGAGCTGGTTTGGCATCTGCGCGGCTGGGCCAACAACCGGGCCGTGCCGAGG
ACGCGTTACTGTCTGCAGCATAACCTCGGGCTGGGCGGCGCCGTCGTCGTCACCGTTTATCGTCGTCCGGATGGA
CGCGATGCGCCCGCGGTGGACGATGCCGAGGTCGGCCGCCTGACGGGCTTGGGGTATAATCCTGCCGTCGAGGCT
CGTGGCTTCACGCGCGAGCAGGCTGCTTCGGTGAGGAGCCGGCATGCGACCAGCGACTGGGCGCTGCAGGATACC
ATGGACAAGGTGCAGGCGAGGTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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