© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|8067 |
| Gene name | |
| Location | scaffold_851:1091..2668 |
| Strand | + |
| Gene length (bp) | 1577 |
| Transcript length (bp) | 1419 |
| Coding sequence length (bp) | 1416 |
| Protein length (aa) | 472 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03663 | Glyco_hydro_76 | Glycosyl hydrolase family 76 | 1.6E-142 | 40 | 400 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P36091|DCW1_YEAST | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCW1 PE=1 SV=1 | 14 | 470 | 8.0E-111 |
| sp|Q75DG6|DCW1_ASHGO | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DCW1 PE=3 SV=2 | 32 | 470 | 7.0E-106 |
| sp|Q6FLP9|DCW1_CANGA | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DCW1 PE=3 SV=1 | 12 | 430 | 1.0E-103 |
| sp|O74556|YCZ2_SCHPO | Putative mannan endo-1,6-alpha-mannosidase C970.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC970.02 PE=3 SV=1 | 34 | 429 | 1.0E-102 |
| sp|Q05031|DFG5_YEAST | Mannan endo-1,6-alpha-mannosidase DFG5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DFG5 PE=1 SV=1 | 36 | 456 | 7.0E-94 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P36091|DCW1_YEAST | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCW1 PE=1 SV=1 | 14 | 470 | 8.0E-111 |
| sp|Q75DG6|DCW1_ASHGO | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DCW1 PE=3 SV=2 | 32 | 470 | 7.0E-106 |
| sp|Q6FLP9|DCW1_CANGA | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DCW1 PE=3 SV=1 | 12 | 430 | 1.0E-103 |
| sp|O74556|YCZ2_SCHPO | Putative mannan endo-1,6-alpha-mannosidase C970.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC970.02 PE=3 SV=1 | 34 | 429 | 1.0E-102 |
| sp|Q05031|DFG5_YEAST | Mannan endo-1,6-alpha-mannosidase DFG5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DFG5 PE=1 SV=1 | 36 | 456 | 7.0E-94 |
| sp|Q5AD78|DCW1_CANAL | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DCW1 PE=1 SV=1 | 35 | 470 | 9.0E-93 |
| sp|Q5ACZ2|DFG5_CANAL | Mannan endo-1,6-alpha-mannosidase DFG5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DFG5 PE=1 SV=1 | 7 | 459 | 9.0E-93 |
| sp|Q9P6I3|YHG7_SCHPO | Putative mannan endo-1,6-alpha-mannosidase C1198.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1198.07c PE=3 SV=2 | 36 | 465 | 3.0E-80 |
| sp|Q9P6I4|YHG6_SCHPO | Putative mannan endo-1,6-alpha-mannosidase C1198.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1198.06c PE=3 SV=1 | 10 | 464 | 5.0E-74 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cell membrane | Signal peptide | 0.1041 | 0.0952 | 0.4302 | 0.5736 | 0.1233 | 0.0318 | 0.4567 | 0.3701 | 0.4071 | 0.0083 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 26 | 0.944222 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 4 | 26 | 22 |
| 2 | 449 | 471 | 22 |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| GH76 | 8.6E-105 | 37 | 400 |
| Orthofinder run ID | 4 |
| Orthogroup | 7 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|8067 MAASVWLSLMMMMMMMMLFGSRLVVGQNHSPFRLDSEDAIKASASILAWDMMQYYKGNMSGAIPGILPGPPPAGD YYWWEAGAMWGTLIDYWAWTGDSTYNDDVTTSMLFQTGKNNDYQPRNVTLSLGNDDQGFWGMTAMLAAELRFPDP PPDKPQWLALAQAVFNTQIHPDRRDDDCGGGLRWQIPRTNRGWDYKNSIANGCFFNMASRLYRFTGNESYATWAV DTWDWMERVGFLDKETYAIYDGAHTHSACTDLNKAQFSYNNGVFAQGAAFMYNATEDPVWKTRTEKLVKYGLKTF FPKGVALEIACETVGTCTTDMITFKGFMHRWYSVITQIAPSTYEAVAPVLNSSTAAAIKQCYGADYGRQCGFRWA AGEYDGRTGAGQEMNVLAAVSSQLLFLGHKASRLPPPPVTARTGGTSQGDPNAGSGGDHVSEPMRPITTADRAGA GILTIVAAAGTFVLYGWMCLGS |
| Coding | >Ophio5|8067 ATGGCCGCGTCGGTGTGGTTGTCGTTGATGATGATGATGATGATGATGATGCTGTTCGGTAGCAGACTCGTCGTC GGCCAGAATCACTCTCCGTTTCGACTCGACTCTGAAGACGCCATCAAGGCCAGCGCCAGCATCCTCGCCTGGGAT ATGATGCAGTACTACAAGGGAAACATGTCCGGAGCCATTCCCGGCATCCTTCCCGGTCCTCCCCCTGCCGGAGAC TACTACTGGTGGGAAGCCGGGGCCATGTGGGGGACTCTCATAGATTACTGGGCCTGGACCGGCGACTCTACCTAC AACGACGACGTCACCACCTCCATGTTGTTTCAGACGGGCAAGAATAACGACTATCAACCTCGCAACGTCACCCTC TCTCTAGGCAACGATGACCAAGGCTTCTGGGGCATGACGGCCATGCTCGCCGCCGAGCTCCGCTTCCCCGACCCG CCGCCGGATAAGCCGCAATGGCTAGCCCTCGCCCAAGCCGTCTTCAACACCCAGATTCATCCGGATCGGCGCGAC GACGACTGCGGCGGTGGCCTTCGCTGGCAGATCCCGAGAACGAACCGTGGCTGGGATTACAAGAATAGCATCGCC AACGGCTGCTTCTTCAACATGGCCTCTCGTCTCTACCGCTTCACCGGCAACGAGTCGTATGCGACCTGGGCCGTC GACACCTGGGATTGGATGGAGCGCGTCGGCTTTCTCGACAAGGAGACGTATGCCATCTACGATGGTGCTCACACC CATTCCGCCTGTACGGATCTGAACAAGGCTCAGTTCTCCTACAACAATGGAGTCTTTGCCCAGGGCGCCGCCTTC ATGTACAACGCCACGGAAGACCCGGTCTGGAAGACGAGAACCGAGAAGCTCGTCAAGTACGGTCTCAAGACCTTC TTCCCCAAGGGCGTCGCCTTGGAAATCGCCTGCGAAACCGTCGGCACCTGTACGACCGACATGATCACCTTCAAA GGCTTCATGCACCGTTGGTACTCCGTCATCACTCAAATCGCCCCTTCTACCTACGAAGCCGTGGCCCCCGTTCTG AATTCGTCGACGGCGGCCGCCATCAAGCAGTGTTATGGCGCCGACTACGGTCGCCAATGCGGCTTCAGATGGGCT GCCGGCGAGTACGACGGTAGGACCGGTGCCGGCCAGGAAATGAATGTCCTCGCCGCCGTCTCCTCCCAACTCCTC TTCCTCGGTCACAAGGCCTCGCGTTTGCCTCCGCCTCCGGTGACGGCCCGGACGGGCGGGACCTCACAGGGCGAT CCCAACGCCGGCTCCGGCGGGGACCACGTCTCGGAGCCTATGCGGCCCATCACCACCGCCGACCGGGCCGGTGCC GGCATCCTGACCATCGTTGCCGCGGCCGGAACCTTTGTGCTTTACGGATGGATGTGCTTAGGAAGT |
| Transcript | >Ophio5|8067 ATGGCCGCGTCGGTGTGGTTGTCGTTGATGATGATGATGATGATGATGATGCTGTTCGGTAGCAGACTCGTCGTC GGCCAGAATCACTCTCCGTTTCGACTCGACTCTGAAGACGCCATCAAGGCCAGCGCCAGCATCCTCGCCTGGGAT ATGATGCAGTACTACAAGGGAAACATGTCCGGAGCCATTCCCGGCATCCTTCCCGGTCCTCCCCCTGCCGGAGAC TACTACTGGTGGGAAGCCGGGGCCATGTGGGGGACTCTCATAGATTACTGGGCCTGGACCGGCGACTCTACCTAC AACGACGACGTCACCACCTCCATGTTGTTTCAGACGGGCAAGAATAACGACTATCAACCTCGCAACGTCACCCTC TCTCTAGGCAACGATGACCAAGGCTTCTGGGGCATGACGGCCATGCTCGCCGCCGAGCTCCGCTTCCCCGACCCG CCGCCGGATAAGCCGCAATGGCTAGCCCTCGCCCAAGCCGTCTTCAACACCCAGATTCATCCGGATCGGCGCGAC GACGACTGCGGCGGTGGCCTTCGCTGGCAGATCCCGAGAACGAACCGTGGCTGGGATTACAAGAATAGCATCGCC AACGGCTGCTTCTTCAACATGGCCTCTCGTCTCTACCGCTTCACCGGCAACGAGTCGTATGCGACCTGGGCCGTC GACACCTGGGATTGGATGGAGCGCGTCGGCTTTCTCGACAAGGAGACGTATGCCATCTACGATGGTGCTCACACC CATTCCGCCTGTACGGATCTGAACAAGGCTCAGTTCTCCTACAACAATGGAGTCTTTGCCCAGGGCGCCGCCTTC ATGTACAACGCCACGGAAGACCCGGTCTGGAAGACGAGAACCGAGAAGCTCGTCAAGTACGGTCTCAAGACCTTC TTCCCCAAGGGCGTCGCCTTGGAAATCGCCTGCGAAACCGTCGGCACCTGTACGACCGACATGATCACCTTCAAA GGCTTCATGCACCGTTGGTACTCCGTCATCACTCAAATCGCCCCTTCTACCTACGAAGCCGTGGCCCCCGTTCTG AATTCGTCGACGGCGGCCGCCATCAAGCAGTGTTATGGCGCCGACTACGGTCGCCAATGCGGCTTCAGATGGGCT GCCGGCGAGTACGACGGTAGGACCGGTGCCGGCCAGGAAATGAATGTCCTCGCCGCCGTCTCCTCCCAACTCCTC TTCCTCGGTCACAAGGCCTCGCGTTTGCCTCCGCCTCCGGTGACGGCCCGGACGGGCGGGACCTCACAGGGCGAT CCCAACGCCGGCTCCGGCGGGGACCACGTCTCGGAGCCTATGCGGCCCATCACCACCGCCGACCGGGCCGGTGCC GGCATCCTGACCATCGTTGCCGCGGCCGGAACCTTTGTGCTTTACGGATGGATGTGCTTAGGAAGTTAA |
| Gene | >Ophio5|8067 ATGGCCGCGTCGGTGTGGTTGTCGTTGATGATGATGATGATGATGATGATGCTGTTCGGTAGCAGACTCGTCGTC GGCCAGAATCACTCTCCGTTTCGACTCGACTCTGAAGGTGTGTCGTCGTCGTCTTTTCCCCTACCTCCCTCCCCC CCTTACAAAATCCTCGATGCCTTTCTTTTCTTTGCCGAATGAATGAAATGAATCCATATTAGACGCCATCAAGGC CAGCGCCAGCATCCTCGCCTGGGATATGATGCAGTACTACAAGGGAAACATGTCCGGAGCCATTCCCGGCATCCT TCCCGGTCCTCCCCCTGCCGGAGACTACTACTGGTGGGAAGCCGGGGCCATGTGGGGGACTCTCATAGATTACTG GGCCTGGACCGGCGACTCTACCTACAACGACGACGTCACCACCTCCATGTTGTTTCAGACGGGCAAGAATAACGA CTATCAACCTCGCAACGTCACCCTCTCTCTAGGCAACGATGACCAAGGCTTCTGGGGCATGACGGCCATGCTCGC CGCCGAGCTCCGCTTCCCCGACCCGCCGCCGGATAAGCCGCAATGGCTAGCCCTCGCCCAAGCCGTCTTCAACAC CCAGATTCATCCGGATCGGCGCGACGACGACTGCGGCGGTGGCCTTCGCTGGCAGATCCCGAGAACGAACCGTGG CTGGGATTACAAGAATAGCATCGCCAACGGCTGCTTCTTCAACATGGCCTCTCGTCTCTACCGCTTCACCGGCAA CGAGTCGTATGCGACCTGGGCCGTCGACACCTGGGATTGGATGGAGCGCGTCGGCTTTCTCGACAAGGAGACGTA TGCCATCTACGATGGTGCTCACACCCATTCCGCCTGTACGGATCTGAACAAGGCTCAGTTCTCCTACAACAATGG AGTCTTTGCCCAGGGCGCCGCCTTCATGTACAACGCCGTACGTGTCGAGAACAAGAGCCCGGCCAGAAGGAGTTT CTGCGCTGACGTTGGCTTAGACGGAAGACCCGGTCTGGAAGACGAGAACCGAGAAGCTCGTCAAGTACGGTCTCA AGACCTTCTTCCCCAAGGGCGTCGCCTTGGAAATCGCCTGCGAAACCGTCGGCACCTGTACGACCGACATGATCA CCTTCAAAGGCTTCATGCACCGTTGGTACTCCGTCATCACTCAAATCGCCCCTTCTACCTACGAAGCCGTGGCCC CCGTTCTGAATTCGTCGACGGCGGCCGCCATCAAGCAGTGTTATGGCGCCGACTACGGTCGCCAATGCGGCTTCA GATGGGCTGCCGGCGAGTACGACGGTAGGACCGGTGCCGGCCAGGAAATGAATGTCCTCGCCGCCGTCTCCTCCC AACTCCTCTTCCTCGGTCACAAGGCCTCGCGTTTGCCTCCGCCTCCGGTGACGGCCCGGACGGGCGGGACCTCAC AGGGCGATCCCAACGCCGGCTCCGGCGGGGACCACGTCTCGGAGCCTATGCGGCCCATCACCACCGCCGACCGGG CCGGTGCCGGCATCCTGACCATCGTTGCCGCGGCCGGAACCTTTGTGCTTTACGGATGGATGTGCTTAGGAAGTT AA |