Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8056
Gene name
Locationscaffold_85:23010..24955
Strand-
Gene length (bp)1945
Transcript length (bp)1737
Coding sequence length (bp)1734
Protein length (aa) 578

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07651 ANTH ANTH domain 2.0E-68 5 262
PF01417 ENTH ENTH domain 1.9E-09 3 114

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O60167|YHC3_SCHPO ENTH domain-containing protein C19F8.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC19F8.03c PE=1 SV=1 4 273 4.0E-74
sp|P38856|AP18A_YEAST Clathrin coat assembly protein AP180A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAP1801 PE=1 SV=1 3 458 1.0E-53
sp|P53309|AP18B_YEAST Clathrin coat assembly protein AP180B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAP1802 PE=1 SV=1 1 262 6.0E-47
sp|Q61548|AP180_MOUSE Clathrin coat assembly protein AP180 OS=Mus musculus GN=Snap91 PE=1 SV=1 3 260 4.0E-32
sp|Q9XZI6|PICAL_CAEEL Phosphatidylinositol-binding clathrin assembly protein unc-11 OS=Caenorhabditis elegans GN=unc-11 PE=1 SV=1 3 313 4.0E-32
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Swissprot ID Swissprot Description Start End E-value
sp|O60167|YHC3_SCHPO ENTH domain-containing protein C19F8.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC19F8.03c PE=1 SV=1 4 273 4.0E-74
sp|P38856|AP18A_YEAST Clathrin coat assembly protein AP180A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAP1801 PE=1 SV=1 3 458 1.0E-53
sp|P53309|AP18B_YEAST Clathrin coat assembly protein AP180B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAP1802 PE=1 SV=1 1 262 6.0E-47
sp|Q61548|AP180_MOUSE Clathrin coat assembly protein AP180 OS=Mus musculus GN=Snap91 PE=1 SV=1 3 260 4.0E-32
sp|Q9XZI6|PICAL_CAEEL Phosphatidylinositol-binding clathrin assembly protein unc-11 OS=Caenorhabditis elegans GN=unc-11 PE=1 SV=1 3 313 4.0E-32
sp|Q05140|AP180_RAT Clathrin coat assembly protein AP180 OS=Rattus norvegicus GN=Snap91 PE=1 SV=1 3 260 8.0E-32
sp|O60641|AP180_HUMAN Clathrin coat assembly protein AP180 OS=Homo sapiens GN=SNAP91 PE=1 SV=2 3 260 3.0E-31
sp|Q7M6Y3|PICAL_MOUSE Phosphatidylinositol-binding clathrin assembly protein OS=Mus musculus GN=Picalm PE=1 SV=1 3 260 2.0E-30
sp|O55012|PICAL_RAT Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus GN=Picalm PE=1 SV=1 3 260 2.0E-30
sp|Q13492|PICAL_HUMAN Phosphatidylinositol-binding clathrin assembly protein OS=Homo sapiens GN=PICALM PE=1 SV=2 3 260 2.0E-30
sp|Q9VI75|PICAL_DROME Phosphatidylinositol-binding clathrin assembly protein LAP OS=Drosophila melanogaster GN=lap PE=1 SV=3 7 294 3.0E-30
sp|Q9LVD8|CAP7_ARATH Putative clathrin assembly protein At5g57200 OS=Arabidopsis thaliana GN=At5g57200 PE=3 SV=1 5 262 2.0E-22
sp|P94017|CAP9_ARATH Putative clathrin assembly protein At1g14910 OS=Arabidopsis thaliana GN=At1g14910 PE=2 SV=2 3 262 2.0E-22
sp|Q8LBH2|CAP8_ARATH Putative clathrin assembly protein At2g01600 OS=Arabidopsis thaliana GN=At2g01600 PE=2 SV=2 3 262 4.0E-22
sp|Q8VYT2|CAP6_ARATH Putative clathrin assembly protein At4g25940 OS=Arabidopsis thaliana GN=At4g25940 PE=2 SV=1 9 262 7.0E-21
sp|Q9LHS0|CAP10_ARATH Putative clathrin assembly protein At5g35200 OS=Arabidopsis thaliana GN=At5g35200 PE=1 SV=1 5 262 1.0E-20
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GO

GO Term Description Terminal node
GO:0005543 phospholipid binding Yes
GO:0008289 lipid binding No
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 47 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8056
MSSSFEKSVKGATKIKNAPPKNKYIEHILVATHAGEAGTSDVFRALQHRLRDSTWTVVFKSLIVVHLMIREGSPD
VALAYLSRNRNMLALGHFSDAQTQGRNIRHYASYLSERAKAYRDTKTDWVRAPESRLERLSVEKGLLRETEVVQT
QLTALVRCDVLESEPQNDITILVFRLLVLDLLSLFQVLNQGLINILGHFFEMSKPDAERAMDIYRTFTKQTDAVV
QYLSVARLHEHHTRVEVPKLKHAPVNLGRQLEGYLKDPDFEIHRRQYIAEQDAKKKGSRGTPAKTTKAADFPSPS
SFAVARKPEPNKGPDPDLIDFFGSIEQNQTPMQTDPQHANTALFQPQQTGMPFASNGFVHQPTGFAPDVFQQQQQ
TFAQPQPLQVNYTGAGFGGYTPQPQQGFQPGTLGSIPQDSVASFQNQSSAGLQPMQTGMGTNPFRQSILMAQQTG
VERPFSQPMTGTPPINRQSTNPFARSPPPSLSPFQSQPPAAAPLQPTLTGTNPFARNTFQHPAQQQDPMQTGIMP
QATGSNPFRNGSFTNHATGMGWQHNQAPIGGGIDQLSTVPVFPRPAQQTPWQQ
Coding >Ophio5|8056
ATGTCAAGCTCGTTCGAAAAGTCCGTCAAGGGCGCAACCAAGATCAAGAATGCGCCGCCAAAGAACAAGTACATC
GAGCACATCCTCGTCGCCACCCACGCCGGCGAGGCCGGCACAAGCGACGTCTTTCGCGCTCTGCAGCATCGTCTG
CGCGACTCGACCTGGACCGTCGTCTTCAAGAGCCTCATCGTTGTTCATCTCATGATCCGTGAGGGGTCTCCAGAC
GTTGCCTTGGCATATCTCTCCAGGAATCGTAATATGCTGGCCTTGGGCCATTTCTCTGACGCTCAGACGCAGGGC
AGAAATATCCGTCACTATGCTAGCTATCTATCCGAACGAGCCAAGGCATACCGTGATACCAAGACCGACTGGGTC
CGCGCCCCGGAATCGAGGCTCGAGAGGCTGTCTGTCGAAAAGGGGTTGCTACGCGAGACCGAGGTGGTACAGACG
CAGCTCACGGCCCTGGTGAGGTGTGACGTCTTAGAGTCGGAGCCGCAAAACGACATCACCATCCTCGTATTCCGA
CTTCTCGTCCTCGACCTCTTGTCCCTATTTCAGGTCCTCAATCAGGGCCTCATCAACATCTTAGGCCACTTCTTT
GAAATGTCCAAACCCGACGCGGAGAGAGCTATGGACATCTATCGCACCTTCACCAAGCAGACGGACGCCGTTGTC
CAATATCTCAGCGTCGCGAGGCTACACGAGCATCATACGCGCGTCGAGGTGCCCAAACTAAAGCACGCCCCTGTG
AACCTAGGCCGTCAGCTCGAGGGATATCTCAAAGACCCTGATTTTGAGATCCATCGGCGGCAATATATCGCCGAG
CAGGACGCCAAGAAAAAGGGGTCAAGGGGCACACCTGCCAAGACGACCAAGGCGGCCGACTTTCCGAGTCCGTCC
TCGTTTGCCGTTGCGAGAAAGCCCGAGCCGAACAAAGGTCCAGACCCTGACCTCATCGACTTTTTCGGCTCGATC
GAGCAGAATCAAACACCCATGCAGACGGACCCGCAACACGCGAACACGGCCCTCTTCCAGCCTCAACAGACTGGT
ATGCCCTTTGCGTCTAACGGCTTCGTTCACCAGCCCACCGGTTTTGCGCCCGACGTCTTCCAACAGCAACAACAG
ACGTTTGCCCAGCCGCAGCCGCTACAGGTCAACTATACGGGAGCCGGCTTCGGCGGTTACACGCCCCAGCCGCAG
CAGGGCTTCCAGCCCGGCACCCTGGGATCCATCCCGCAAGATAGCGTGGCCAGCTTCCAGAACCAGTCGTCGGCA
GGGCTGCAGCCGATGCAGACGGGCATGGGGACGAATCCCTTCCGGCAGTCAATACTGATGGCGCAGCAGACGGGT
GTAGAGCGCCCCTTTTCGCAGCCCATGACCGGCACCCCGCCGATAAACCGGCAGTCGACGAACCCGTTCGCCCGT
TCGCCTCCCCCGAGCTTGTCGCCTTTCCAGTCTCAGCCGCCCGCCGCGGCGCCGCTCCAGCCCACGTTGACGGGG
ACAAACCCCTTTGCTCGAAACACTTTCCAGCATCCAGCCCAGCAGCAGGATCCGATGCAGACGGGGATAATGCCA
CAGGCCACGGGATCGAACCCTTTCCGCAATGGCTCCTTTACCAACCATGCTACGGGCATGGGGTGGCAGCACAAT
CAGGCGCCTATTGGTGGGGGAATCGACCAGCTGTCGACAGTTCCCGTCTTTCCGCGGCCGGCGCAACAAACACCT
TGGCAGCAG
Transcript >Ophio5|8056
ATGTCAAGCTCGTTCGAAAAGTCCGTCAAGGGCGCAACCAAGATCAAGAATGCGCCGCCAAAGAACAAGTACATC
GAGCACATCCTCGTCGCCACCCACGCCGGCGAGGCCGGCACAAGCGACGTCTTTCGCGCTCTGCAGCATCGTCTG
CGCGACTCGACCTGGACCGTCGTCTTCAAGAGCCTCATCGTTGTTCATCTCATGATCCGTGAGGGGTCTCCAGAC
GTTGCCTTGGCATATCTCTCCAGGAATCGTAATATGCTGGCCTTGGGCCATTTCTCTGACGCTCAGACGCAGGGC
AGAAATATCCGTCACTATGCTAGCTATCTATCCGAACGAGCCAAGGCATACCGTGATACCAAGACCGACTGGGTC
CGCGCCCCGGAATCGAGGCTCGAGAGGCTGTCTGTCGAAAAGGGGTTGCTACGCGAGACCGAGGTGGTACAGACG
CAGCTCACGGCCCTGGTGAGGTGTGACGTCTTAGAGTCGGAGCCGCAAAACGACATCACCATCCTCGTATTCCGA
CTTCTCGTCCTCGACCTCTTGTCCCTATTTCAGGTCCTCAATCAGGGCCTCATCAACATCTTAGGCCACTTCTTT
GAAATGTCCAAACCCGACGCGGAGAGAGCTATGGACATCTATCGCACCTTCACCAAGCAGACGGACGCCGTTGTC
CAATATCTCAGCGTCGCGAGGCTACACGAGCATCATACGCGCGTCGAGGTGCCCAAACTAAAGCACGCCCCTGTG
AACCTAGGCCGTCAGCTCGAGGGATATCTCAAAGACCCTGATTTTGAGATCCATCGGCGGCAATATATCGCCGAG
CAGGACGCCAAGAAAAAGGGGTCAAGGGGCACACCTGCCAAGACGACCAAGGCGGCCGACTTTCCGAGTCCGTCC
TCGTTTGCCGTTGCGAGAAAGCCCGAGCCGAACAAAGGTCCAGACCCTGACCTCATCGACTTTTTCGGCTCGATC
GAGCAGAATCAAACACCCATGCAGACGGACCCGCAACACGCGAACACGGCCCTCTTCCAGCCTCAACAGACTGGT
ATGCCCTTTGCGTCTAACGGCTTCGTTCACCAGCCCACCGGTTTTGCGCCCGACGTCTTCCAACAGCAACAACAG
ACGTTTGCCCAGCCGCAGCCGCTACAGGTCAACTATACGGGAGCCGGCTTCGGCGGTTACACGCCCCAGCCGCAG
CAGGGCTTCCAGCCCGGCACCCTGGGATCCATCCCGCAAGATAGCGTGGCCAGCTTCCAGAACCAGTCGTCGGCA
GGGCTGCAGCCGATGCAGACGGGCATGGGGACGAATCCCTTCCGGCAGTCAATACTGATGGCGCAGCAGACGGGT
GTAGAGCGCCCCTTTTCGCAGCCCATGACCGGCACCCCGCCGATAAACCGGCAGTCGACGAACCCGTTCGCCCGT
TCGCCTCCCCCGAGCTTGTCGCCTTTCCAGTCTCAGCCGCCCGCCGCGGCGCCGCTCCAGCCCACGTTGACGGGG
ACAAACCCCTTTGCTCGAAACACTTTCCAGCATCCAGCCCAGCAGCAGGATCCGATGCAGACGGGGATAATGCCA
CAGGCCACGGGATCGAACCCTTTCCGCAATGGCTCCTTTACCAACCATGCTACGGGCATGGGGTGGCAGCACAAT
CAGGCGCCTATTGGTGGGGGAATCGACCAGCTGTCGACAGTTCCCGTCTTTCCGCGGCCGGCGCAACAAACACCT
TGGCAGCAGTGA
Gene >Ophio5|8056
ATGTCAAGCTCGTTCGAAAAGTCCGTCAAGGGCGCAACCAAGATCAAGGTCAGCCAGCTCTATCCTCGGCTTTCT
GCCCTACTGACATAGCGAAGAATGCGCCGCCAAAGAACAAGTACATCGAGCACATCCTCGTCGCCACCCACGCCG
GCGAGGCCGGCACAAGCGACGTCTTTCGCGCTCTGCAGCATCGTCTGCGCGACTCGACCTGGACCGTCGTCTTCA
AGAGCCTCATCGTTGTTCATCTCATGATCCGTGAGGGGTCTCCAGACGTTGCCTTGGCATATCTCTCCAGGAATC
GTAATATGCTGGCCTTGGGCCATTTCTCTGACGGTCCGCTCCACTTTCGTCGCGGCTGCCTATTCGACGCTGACC
GACGCACAGCTCAGACGCAGGGCAGAAATATCCGTCACTATGCTAGCTATCTATCCGAACGAGCCAAGGCATACC
GTGATACCAAGACCGACTGGGTCCGCGCCCCGGAATCGAGGCTCGAGAGGCTGTCTGTCGAAAAGGGGTTGCTAC
GCGAGACCGAGGTGGTACAGACGCAGCTCACGGCCCTGGTGAGGTGTGACGTGAGTTGAACATTCGCCACCACGG
CCTTCAATGTCCTCGGCTGATATCATTATTCACAGGTCTTAGAGTCGGAGCCGCAAAACGACATCACCATCCTCG
TATTCCGACTTCTCGTCCTCGACCTCTTGTCCCTATTTCAGGTCCTCAATCAGGGCCTCATCAACATCTTAGGTG
CGCGGGCGACGATTTCCCCTCGTCCTCCCAACTAACACTGCCTCCAGGCCACTTCTTTGAAATGTCCAAACCCGA
CGCGGAGAGAGCTATGGACATCTATCGCACCTTCACCAAGCAGACGGACGCCGTTGTCCAATATCTCAGCGTCGC
GAGGCTACACGAGCATCATACGCGCGTCGAGGTGCCCAAACTAAAGCACGCCCCTGTGAACCTAGGCCGTCAGCT
CGAGGGATATCTCAAAGACCCTGATTTTGAGATCCATCGGCGGCAATATATCGCCGAGCAGGACGCCAAGAAAAA
GGGGTCAAGGGGCACACCTGCCAAGACGACCAAGGCGGCCGACTTTCCGAGTCCGTCCTCGTTTGCCGTTGCGAG
AAAGCCCGAGCCGAACAAAGGTCCAGACCCTGACCTCATCGACTTTTTCGGCTCGATCGAGCAGAATCAAACACC
CATGCAGACGGACCCGCAACACGCGAACACGGCCCTCTTCCAGCCTCAACAGACTGGTATGCCCTTTGCGTCTAA
CGGCTTCGTTCACCAGCCCACCGGTTTTGCGCCCGACGTCTTCCAACAGCAACAACAGACGTTTGCCCAGCCGCA
GCCGCTACAGGTCAACTATACGGGAGCCGGCTTCGGCGGTTACACGCCCCAGCCGCAGCAGGGCTTCCAGCCCGG
CACCCTGGGATCCATCCCGCAAGATAGCGTGGCCAGCTTCCAGAACCAGTCGTCGGCAGGGCTGCAGCCGATGCA
GACGGGCATGGGGACGAATCCCTTCCGGCAGTCAATACTGATGGCGCAGCAGACGGGTGTAGAGCGCCCCTTTTC
GCAGCCCATGACCGGCACCCCGCCGATAAACCGGCAGTCGACGAACCCGTTCGCCCGTTCGCCTCCCCCGAGCTT
GTCGCCTTTCCAGTCTCAGCCGCCCGCCGCGGCGCCGCTCCAGCCCACGTTGACGGGGACAAACCCCTTTGCTCG
AAACACTTTCCAGCATCCAGCCCAGCAGCAGGATCCGATGCAGACGGGGATAATGCCACAGGCCACGGGATCGAA
CCCTTTCCGCAATGGCTCCTTTACCAACCATGCTACGGGCATGGGGTGGCAGCACAATCAGGCGCCTATTGGTGG
GGGAATCGACCAGCTGTCGACAGTTCCCGTCTTTCCGCGGCCGGCGCAACAAACACCTTGGCAGCAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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