Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8052
Gene name
Locationscaffold_85:17014..18053
Strand+
Gene length (bp)1039
Transcript length (bp)786
Coding sequence length (bp)783
Protein length (aa) 261

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04991 LicD LicD family 2.4E-16 78 180
PF04991 LicD LicD family 1.6E-06 196 234

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P36044|MNN4_YEAST Protein MNN4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNN4 PE=4 SV=2 48 179 1.0E-14
sp|P40355|YJ31_YEAST Uncharacterized protein YJR061W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJR061W PE=4 SV=2 36 179 9.0E-14

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8052
MKGLWFVLPLLVASATASTSLSKRDPVPLDEDLYPEPKYFKEAFGYAHYDARFMVHTLDEEPHRDVLRFLIQTYL
ATCRALGVETWLMHGSLLGWWWGKKIMPWDMDADVQVTEVDLYYLAAHYNMSVYYYKYGDMKEGRYFLLDVNPHF
EHRDTDDALNLIDARWIDMATGLFIDITAARYHLEHPAGEGILYDKNGHEFRDTYVYPLRNTTFEGVRAMIPYRY
KEMLESEYGKEALTETTFNGHVFDDKNMQWVLEPKE
Coding >Ophio5|8052
ATGAAGGGCCTGTGGTTTGTCCTGCCGCTACTGGTTGCGTCAGCTACGGCGTCTACGAGCTTGTCCAAGAGGGAT
CCGGTACCGCTCGACGAGGACCTCTACCCGGAGCCCAAGTATTTTAAGGAGGCTTTCGGCTATGCGCACTACGAT
GCGCGCTTCATGGTCCACACGCTCGACGAGGAGCCGCATCGAGACGTCCTCCGGTTCCTCATCCAGACCTACCTG
GCGACTTGCCGCGCACTCGGCGTCGAGACGTGGTTGATGCACGGAAGCCTCCTCGGCTGGTGGTGGGGGAAGAAG
ATCATGCCCTGGGATATGGATGCCGACGTGCAAGTAACCGAGGTGGACCTATATTATCTGGCCGCGCACTACAAC
ATGTCCGTATACTACTACAAGTACGGGGACATGAAGGAAGGTCGTTACTTTCTGCTCGACGTCAACCCGCACTTT
GAACATCGCGACACCGACGACGCCCTGAACCTTATCGACGCCCGCTGGATCGACATGGCTACGGGTCTGTTCATC
GACATAACCGCTGCGAGGTACCATCTGGAGCATCCGGCCGGCGAGGGCATTCTTTACGACAAGAACGGCCACGAA
TTTCGGGACACTTACGTATACCCGTTGAGGAACACGACATTTGAAGGCGTGCGGGCCATGATTCCGTATCGCTAC
AAGGAGATGCTCGAGTCTGAGTATGGAAAGGAGGCCTTGACCGAGACGACGTTCAATGGGCACGTCTTCGACGAC
AAGAATATGCAGTGGGTGCTGGAGCCCAAGGAG
Transcript >Ophio5|8052
ATGAAGGGCCTGTGGTTTGTCCTGCCGCTACTGGTTGCGTCAGCTACGGCGTCTACGAGCTTGTCCAAGAGGGAT
CCGGTACCGCTCGACGAGGACCTCTACCCGGAGCCCAAGTATTTTAAGGAGGCTTTCGGCTATGCGCACTACGAT
GCGCGCTTCATGGTCCACACGCTCGACGAGGAGCCGCATCGAGACGTCCTCCGGTTCCTCATCCAGACCTACCTG
GCGACTTGCCGCGCACTCGGCGTCGAGACGTGGTTGATGCACGGAAGCCTCCTCGGCTGGTGGTGGGGGAAGAAG
ATCATGCCCTGGGATATGGATGCCGACGTGCAAGTAACCGAGGTGGACCTATATTATCTGGCCGCGCACTACAAC
ATGTCCGTATACTACTACAAGTACGGGGACATGAAGGAAGGTCGTTACTTTCTGCTCGACGTCAACCCGCACTTT
GAACATCGCGACACCGACGACGCCCTGAACCTTATCGACGCCCGCTGGATCGACATGGCTACGGGTCTGTTCATC
GACATAACCGCTGCGAGGTACCATCTGGAGCATCCGGCCGGCGAGGGCATTCTTTACGACAAGAACGGCCACGAA
TTTCGGGACACTTACGTATACCCGTTGAGGAACACGACATTTGAAGGCGTGCGGGCCATGATTCCGTATCGCTAC
AAGGAGATGCTCGAGTCTGAGTATGGAAAGGAGGCCTTGACCGAGACGACGTTCAATGGGCACGTCTTCGACGAC
AAGAATATGCAGTGGGTGCTGGAGCCCAAGGAGTGA
Gene >Ophio5|8052
ATGAAGGGCCTGTGGTTTGTCCTGCCGCTACTGGTTGCGTCAGCTACGGCGTCTACGAGCTTGTCCAAGAGGGAT
CCGGTACCGCTCGACGAGGACCTCTACCCGGAGCCCAAGTATTTTAGTAAGTGTCTACCAAATACGACGCTACGG
GACACTGCTGACCCAATGCCACTTAGAGGAGGCTTTGTAGGAATTTCTTGCCCGTTCCCGGATGACTGCCCTCGC
TTACCTCTCCAGCGGCTATGCGCACTACGATGCGCGCTTCATGGTCCACACGCTCGACGAGGAGCCGCATCGAGA
CGTCCTCCGGTTCCTCATCCAGACCTACCTGGCGACTTGCCGCGCACTCGGCGTCGAGACGTGGTTGATGCACGG
AAGCCTCCTCGGCTGGTGGTGGGGGAAGAAGGCTCGTCTTGTCGACTGTCGTGAGCCCCCCGAGCTGACGTCCTC
CAGATCATGCCCTGGGATATGGATGCCGACGTGCAAGTAACCGAGGTGGACCTATATTATCTGGCCGCGCACTAC
AACATGTCCGTATACTACTACAAGTACGGGGACATGAAGGAAGGTCGTTACTTTCTGCTCGACGTCAACCCGCAC
TTTGAACATCGCGACACCGACGACGCCCTGAACCTTATCGACGCCCGCTGGATCGACATGGCTACGGGTCTGTTC
ATCGACATAACCGCTGCGAGGTACCATCTGGAGCATCCGGCCGGCGAGGGCATTCTTTACGACAAGAACGGCCAC
GAATTTCGGGTGAGCGAAGCGTCTGTCTGAGCAAGACAAATGCTGATGGCAGGAGCAGGACACTTACGTATACCC
GTTGAGGAACACGACATTTGAAGGCGTGCGGGCCATGATTCCGTATCGCTACAAGGAGATGCTCGAGTCTGAGTA
TGGAAAGGAGGCCTTGACCGAGACGACGTTCAATGGGTAGGCTTCTAATTCTGACGGCAGTTTATGACGTCTGAC
TTCTTCGCGCAGGCACGTCTTCGACGACAAGAATATGCAGTGGGTGCTGGAGCCCAAGGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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