Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8042
Gene name
Locationscaffold_847:4849..6225
Strand-
Gene length (bp)1376
Transcript length (bp)1140
Coding sequence length (bp)1137
Protein length (aa) 379

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 212 234 22
2 266 288 22
3 309 331 22
4 351 373 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8042
MASANSWLKAQRKSDLVELADRVGMTEFDRLKKTELELALDDFIPRHAASLSARSDLAGYFASRSRALGSPLKRL
DESDAAAAAANTTRALRVPKRRVVRTSAVVVAKPVQEEVEISPEPSSEVGSTSSSSRSSNSTGGGGGGGEDGLMT
RQTPVRKLSLTSAGAVLPATPADVALAVDRSTTAVSRRMSSLYRESGIPLASRTARETLSTVNSILLCVSALELV
CVGIEILSTRYAFTLPAMASLGTPDWPVHLPDMFLLLTSSFWIPAGTWLVTAIVLPCLAGYFFNLSAAASSGSGS
GSGSKSFETVVVVVVDPLVFSVAKALIAYVVYGHGVTFHVLDPVAIRRLDGAVFGGYRGVLVGAAVTAIVSMYDA
VLRR
Coding >Ophio5|8042
ATGGCCTCGGCAAATAGCTGGCTTAAAGCTCAGCGTAAGAGCGACCTCGTCGAGTTGGCTGACAGAGTCGGCATG
ACTGAATTCGACCGGCTTAAGAAAACCGAACTGGAACTGGCGCTCGACGACTTCATTCCTCGTCACGCCGCTTCG
CTCTCTGCTCGATCCGATCTGGCCGGTTACTTCGCCAGTCGGTCCAGGGCGCTCGGCTCGCCGCTCAAGCGTCTG
GATGAGTCTGACGCGGCGGCGGCGGCGGCGAACACGACGAGGGCGTTGCGGGTGCCCAAGAGGCGCGTTGTGAGG
ACTTCGGCAGTGGTTGTGGCTAAGCCGGTGCAGGAGGAGGTCGAGATTTCGCCTGAGCCGTCGTCCGAAGTTGGA
AGCACAAGCAGCAGCAGCCGCAGCAGCAACAGCACCGGAGGCGGCGGCGGCGGCGGCGAAGACGGCCTCATGACC
CGCCAAACGCCCGTCCGAAAGCTGTCCCTGACCTCGGCAGGCGCCGTCCTGCCGGCGACGCCAGCCGACGTCGCC
CTCGCCGTTGACCGGTCGACGACGGCAGTGAGCAGACGCATGTCCAGCCTCTACCGTGAGAGCGGCATCCCCCTC
GCCTCACGAACCGCTCGCGAAACGCTCAGCACCGTCAACAGCATCCTCCTGTGCGTCTCGGCCCTGGAACTGGTC
TGCGTCGGGATCGAGATCCTCTCGACGCGGTACGCCTTCACCCTGCCGGCCATGGCGTCGCTGGGAACGCCGGAT
TGGCCGGTCCATCTACCCGACATGTTCCTCCTTCTCACCTCGAGCTTCTGGATCCCGGCGGGGACCTGGCTCGTC
ACCGCCATTGTCCTGCCTTGCCTTGCCGGCTACTTCTTCAATCTCAGTGCCGCCGCCTCCTCCGGCTCCGGCTCC
GGCTCCGGCTCGAAGAGTTTCGAAACTGTCGTCGTCGTCGTCGTCGATCCTCTCGTCTTCAGCGTCGCCAAGGCT
CTTATCGCCTACGTCGTCTACGGTCACGGCGTCACCTTTCACGTCTTGGATCCTGTCGCCATTCGCCGTCTTGAC
GGTGCCGTCTTCGGCGGCTATCGGGGTGTGCTTGTTGGCGCCGCCGTTACCGCCATCGTTAGCATGTACGATGCC
GTCCTCAGACGA
Transcript >Ophio5|8042
ATGGCCTCGGCAAATAGCTGGCTTAAAGCTCAGCGTAAGAGCGACCTCGTCGAGTTGGCTGACAGAGTCGGCATG
ACTGAATTCGACCGGCTTAAGAAAACCGAACTGGAACTGGCGCTCGACGACTTCATTCCTCGTCACGCCGCTTCG
CTCTCTGCTCGATCCGATCTGGCCGGTTACTTCGCCAGTCGGTCCAGGGCGCTCGGCTCGCCGCTCAAGCGTCTG
GATGAGTCTGACGCGGCGGCGGCGGCGGCGAACACGACGAGGGCGTTGCGGGTGCCCAAGAGGCGCGTTGTGAGG
ACTTCGGCAGTGGTTGTGGCTAAGCCGGTGCAGGAGGAGGTCGAGATTTCGCCTGAGCCGTCGTCCGAAGTTGGA
AGCACAAGCAGCAGCAGCCGCAGCAGCAACAGCACCGGAGGCGGCGGCGGCGGCGGCGAAGACGGCCTCATGACC
CGCCAAACGCCCGTCCGAAAGCTGTCCCTGACCTCGGCAGGCGCCGTCCTGCCGGCGACGCCAGCCGACGTCGCC
CTCGCCGTTGACCGGTCGACGACGGCAGTGAGCAGACGCATGTCCAGCCTCTACCGTGAGAGCGGCATCCCCCTC
GCCTCACGAACCGCTCGCGAAACGCTCAGCACCGTCAACAGCATCCTCCTGTGCGTCTCGGCCCTGGAACTGGTC
TGCGTCGGGATCGAGATCCTCTCGACGCGGTACGCCTTCACCCTGCCGGCCATGGCGTCGCTGGGAACGCCGGAT
TGGCCGGTCCATCTACCCGACATGTTCCTCCTTCTCACCTCGAGCTTCTGGATCCCGGCGGGGACCTGGCTCGTC
ACCGCCATTGTCCTGCCTTGCCTTGCCGGCTACTTCTTCAATCTCAGTGCCGCCGCCTCCTCCGGCTCCGGCTCC
GGCTCCGGCTCGAAGAGTTTCGAAACTGTCGTCGTCGTCGTCGTCGATCCTCTCGTCTTCAGCGTCGCCAAGGCT
CTTATCGCCTACGTCGTCTACGGTCACGGCGTCACCTTTCACGTCTTGGATCCTGTCGCCATTCGCCGTCTTGAC
GGTGCCGTCTTCGGCGGCTATCGGGGTGTGCTTGTTGGCGCCGCCGTTACCGCCATCGTTAGCATGTACGATGCC
GTCCTCAGACGATGA
Gene >Ophio5|8042
ATGGCCTCGGCAAATAGCTGGCTTAAAGCTCAGCGTAAGAGCGACCTCGTCGAGTTGGCTGACAGAGTCGGCATG
ACTGAGTACTATCCCCTTTTACCCCCCCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATACCTGATTATAG
AAAACAAGAAAAAAAAAACTAACTAATAATATCAAATGGGCAAAATAGATTCGACCGGCTTAAGAAAACCGAACT
GGAACTGGCGCTCGACGACTTCATTCCTCGTCACGCCGCTTCGCTCTCTGCTCGATCCGATCTGGCCGGTTACTT
CGCCAGTCGGTCCAGGGCGCTCGGCTCGCCGCTCAAGCGTCTGGATGAGTCTGACGCGGCGGCGGCGGCGGCGAA
CACGACGAGGGCGTTGCGGGTGCCCAAGAGGCGCGTTGTGAGGACTTCGGCAGTGGTTGTGGCTAAGCCGGTGCA
GGAGGAGGTCGAGATTTCGCCTGAGCCGTCGTCCGAGTTCGTATTTGCCTTTTTACCCTTTTCCCTCCCCCCCCC
CCCCCTTTTTTTATCTTTTTTTCCTTGTTCTGTCAAGCATGGTTGAAATGGGTGGAAAACTGATAATGGTGGCCC
ATAGAGTTGGAAGCACAAGCAGCAGCAGCCGCAGCAGCAACAGCACCGGAGGCGGCGGCGGCGGCGGCGAAGACG
GCCTCATGACCCGCCAAACGCCCGTCCGAAAGCTGTCCCTGACCTCGGCAGGCGCCGTCCTGCCGGCGACGCCAG
CCGACGTCGCCCTCGCCGTTGACCGGTCGACGACGGCAGTGAGCAGACGCATGTCCAGCCTCTACCGTGAGAGCG
GCATCCCCCTCGCCTCACGAACCGCTCGCGAAACGCTCAGCACCGTCAACAGCATCCTCCTGTGCGTCTCGGCCC
TGGAACTGGTCTGCGTCGGGATCGAGATCCTCTCGACGCGGTACGCCTTCACCCTGCCGGCCATGGCGTCGCTGG
GAACGCCGGATTGGCCGGTCCATCTACCCGACATGTTCCTCCTTCTCACCTCGAGCTTCTGGATCCCGGCGGGGA
CCTGGCTCGTCACCGCCATTGTCCTGCCTTGCCTTGCCGGCTACTTCTTCAATCTCAGTGCCGCCGCCTCCTCCG
GCTCCGGCTCCGGCTCCGGCTCGAAGAGTTTCGAAACTGTCGTCGTCGTCGTCGTCGATCCTCTCGTCTTCAGCG
TCGCCAAGGCTCTTATCGCCTACGTCGTCTACGGTCACGGCGTCACCTTTCACGTCTTGGATCCTGTCGCCATTC
GCCGTCTTGACGGTGCCGTCTTCGGCGGCTATCGGGGTGTGCTTGTTGGCGCCGCCGTTACCGCCATCGTTAGCA
TGTACGATGCCGTCCTCAGACGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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