© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|8035 |
| Gene name | |
| Location | scaffold_845:125..684 |
| Strand | + |
| Gene length (bp) | 559 |
| Transcript length (bp) | 510 |
| Coding sequence length (bp) | 507 |
| Protein length (aa) | 169 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Lysosome/Vacuole | Signal peptide|Transmembrane domain | 0.1517 | 0.1336 | 0.1318 | 0.4458 | 0.1486 | 0.0057 | 0.3302 | 0.6704 | 0.3357 | 0.0036 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 40 | 62 | 22 |
| 3 | 119 | 141 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 16391 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps kimflemingae | Ophio5|8035 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|8035 MAFWQNITLVLLFLYSLSTLATFVASAVALIISLVHAAPTRVTLATYVAMSSIIALVTLVVFRQARAGAKVGQYH PLVIYRLTLATAILTVSAHSTTIPSDVFLKYPNTRVSGKLALRLGIISWFLGVYTLIMSTVSMAMAKTPPPLASG GQSSPIDPQTSTHLAKETV |
| Coding | >Ophio5|8035 ATGGCTTTCTGGCAAAACATTACACTCGTTCTGCTCTTCCTCTATTCACTCTCCACTCTGGCAACCTTCGTGGCG TCAGCTGTCGCCCTCATCATCAGTTTGGTTCACGCAGCCCCTACGCGCGTCACTTTGGCCACTTATGTGGCCATG TCATCCATCATTGCCCTCGTCACGTTGGTCGTCTTCCGACAGGCCAGGGCCGGGGCCAAAGTCGGCCAGTACCAT CCGTTGGTGATTTATCGCCTCACTCTGGCCACCGCAATCCTCACGGTCTCTGCACACTCTACCACCATTCCCTCC GATGTATTCCTCAAATACCCCAATACACGCGTTAGCGGGAAACTTGCCTTGAGACTGGGCATCATCAGTTGGTTT CTCGGCGTCTACACATTGATCATGTCTACCGTCTCGATGGCCATGGCTAAAACTCCTCCACCTTTGGCCTCGGGT GGCCAATCTTCCCCAATCGATCCACAGACATCTACACACTTAGCCAAGGAAACCGTT |
| Transcript | >Ophio5|8035 ATGGCTTTCTGGCAAAACATTACACTCGTTCTGCTCTTCCTCTATTCACTCTCCACTCTGGCAACCTTCGTGGCG TCAGCTGTCGCCCTCATCATCAGTTTGGTTCACGCAGCCCCTACGCGCGTCACTTTGGCCACTTATGTGGCCATG TCATCCATCATTGCCCTCGTCACGTTGGTCGTCTTCCGACAGGCCAGGGCCGGGGCCAAAGTCGGCCAGTACCAT CCGTTGGTGATTTATCGCCTCACTCTGGCCACCGCAATCCTCACGGTCTCTGCACACTCTACCACCATTCCCTCC GATGTATTCCTCAAATACCCCAATACACGCGTTAGCGGGAAACTTGCCTTGAGACTGGGCATCATCAGTTGGTTT CTCGGCGTCTACACATTGATCATGTCTACCGTCTCGATGGCCATGGCTAAAACTCCTCCACCTTTGGCCTCGGGT GGCCAATCTTCCCCAATCGATCCACAGACATCTACACACTTAGCCAAGGAAACCGTTTAA |
| Gene | >Ophio5|8035 ATGGCTTTCTGGCAAAACATTACACTCGTTCTGCTCTTCCTCTATTCACTCTCCACTCTGGCAACCTTCGTGGCG TCAGCTGTCGCCCTCATCATCAGTTTGGTTCACGCAGCCCCTACGCGCGTCACTTTGGCCACTTATGTGGCCATG TCATCCATCATTGCCCTCGTCACGTTGGTCGTCTTCCGACAGGCCAGGGCCGGGGCCAAAGTCGGCCAGTACCAT CCGTTGGTGATTTATCGCCTCACTCTGGCCACCGCAATCCTCACGGTCTCTGCACACTCTACCACCATTCCCTCC GATGTATTCCTCAAATACCCCAATACACGCGTTAGCGGGAAACTTGCCTTGAGACTGGGCATCATCAGTTGGTAG GTGACCCAAATACCGGCCTTGTCGACAACTCTAACGCTGCCTCAGGTTTCTCGGCGTCTACACATTGATCATGTC TACCGTCTCGATGGCCATGGCTAAAACTCCTCCACCTTTGGCCTCGGGTGGCCAATCTTCCCCAATCGATCCACA GACATCTACACACTTAGCCAAGGAAACCGTTTAA |