Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8032
Gene name
Locationscaffold_844:2584..3229
Strand-
Gene length (bp)645
Transcript length (bp)447
Coding sequence length (bp)444
Protein length (aa) 148

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 14 0.45

Transmembrane Domains

Domain # Start End Length
1 119 141 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8032
MSSPNVNADNKGPGSQFVTNGPGDQNVASGSGVVYRVDQINNLFSVPHIGAKGIPSLRHLHQLLDAPELLSQSPS
RTDVVRWLMRQPEQTPLDVPGTERWILTSSEFLAWKDPSSPKRLLWMHGILIIIIIIMMIIIIQYASCLCAKV
Coding >Ophio5|8032
ATGTCGTCTCCAAACGTCAACGCGGACAACAAGGGGCCCGGTAGCCAGTTTGTGACTAACGGGCCTGGCGACCAA
AACGTTGCCAGCGGTAGCGGCGTGGTATATAGAGTGGACCAGATAAACAACTTATTCAGCGTGCCGCACATAGGG
GCCAAAGGAATACCCTCGCTGCGGCATCTGCATCAGTTACTAGATGCGCCTGAGCTTTTGTCCCAAAGCCCGAGT
CGCACAGATGTAGTTCGCTGGCTGATGCGCCAGCCGGAACAAACCCCTCTTGACGTTCCCGGTACGGAAAGATGG
ATCTTGACGTCCAGCGAGTTTCTTGCCTGGAAAGACCCCTCGAGTCCTAAGCGGCTCCTGTGGATGCATGGGATA
CTTATTATTATTATTATTATTATGATGATTATTATTATTCAGTACGCTTCCTGCCTTTGCGCTAAGGTG
Transcript >Ophio5|8032
ATGTCGTCTCCAAACGTCAACGCGGACAACAAGGGGCCCGGTAGCCAGTTTGTGACTAACGGGCCTGGCGACCAA
AACGTTGCCAGCGGTAGCGGCGTGGTATATAGAGTGGACCAGATAAACAACTTATTCAGCGTGCCGCACATAGGG
GCCAAAGGAATACCCTCGCTGCGGCATCTGCATCAGTTACTAGATGCGCCTGAGCTTTTGTCCCAAAGCCCGAGT
CGCACAGATGTAGTTCGCTGGCTGATGCGCCAGCCGGAACAAACCCCTCTTGACGTTCCCGGTACGGAAAGATGG
ATCTTGACGTCCAGCGAGTTTCTTGCCTGGAAAGACCCCTCGAGTCCTAAGCGGCTCCTGTGGATGCATGGGATA
CTTATTATTATTATTATTATTATGATGATTATTATTATTCAGTACGCTTCCTGCCTTTGCGCTAAGGTGTAG
Gene >Ophio5|8032
ATGTCGTCTCCAAACGTCAACGCGGACAACAAGGGGCCCGGTAGCCAGTTTGTGACTAACGGGCCTGGCGACCAA
AACGTTGCCAGCGGTAGCGGCGTGGTATATAGAGTGGACCAGATAAACAACTTATGTGAGTCAAGGTCAATCTGC
TCCCTGGTACCAGGCCAGAGGTTAACCTCAGCCGCTTACACGGCTACTCTCTCTCAGTCAGCGTGCCGCACATAG
GGGCCAAAGGAATACCCTCGCTGCGGCATCTGCATCAGTTACTAGATGCGCCTGAGCTTTTGTCCCAAAGCCCGA
GTCGTAAGTTCCCCCGAGACGTGTGAAGCCAGATTGAGACGAAGTGTCCATGTATTAACGAGATGCGAGCTCAAA
AGGCACAGATGTAGTTCGCTGGCTGATGCGCCAGCCGGAACAAACCCCTCTTGACGTTCCCGGTACGGAAAGATG
GATCTTGACGTCCAGCGAGTTTCTTGCCTGGAAAGACCCCTCGAGTCCTAAGCGGCTCCTGTGGATGCATGGGAT
ACGTAAGGCAACCCAAGATCATAAGTCGTCTCGTCGCTGACACGCACAGTTATTATTATTATTATTATTATGATG
ATTATTATTATTCAGTACGCTTCCTGCCTTTGCGCTAAGGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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