Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8003
Gene name
Locationscaffold_839:45..1932
Strand+
Gene length (bp)1887
Transcript length (bp)1650
Coding sequence length (bp)1647
Protein length (aa) 549

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.5

Transmembrane Domains

Domain # Start End Length
1 22 44 22
2 57 79 22
3 89 111 22
4 153 175 22
5 204 226 22
6 239 261 22
7 271 293 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8003
MGSEFGVTPDTKPELRLDGVGVFWIVFAVIWTLIVLGGMTFLYVRRDIPLLRIRGLPLSLASVALLHFYWFAVTL
GYVYGPLMPEVSEFWIMSIWFPFGIALFHASNSRFLYVARAQKKYVMSAVDSGWDPNRPRIRKTLLARWRMLDYS
YKMLLLVGLGMALQLFLTLFMFIISRKFHSSVGIPGTEVTGTPMEQKTEQGRGWEWWPSVFWQIFWAWVVAPVIL
WRARHLRDTQGWRAQTIACCISGLHAAPMWLVALYAPGMAPVNQYFIPPQWIAVSIMMMEIFTIFIPCWEVRKQQ
ALCQETLDSIARWESRQKSATHCGKSLTSGAPSWMRKAESISSSGNGSILTMDALEHTLAKNPEPLQHFSALRDF
SGENIAFLTRIREWRATYLLPASRVAAAGLEDEEKKGGTGTGPQVSTLSRECFESALRIYMDFISSNSAEFQVNL
SSQDFKNLQAVFEPAARAIYGDNASPDPATPFDEAPRQLTADSQDRIRFRGDIPVHFSDTVFDDSEMSIKYLVLT
NTWPKFIKERRSFDAASSVESART
Coding >Ophio5|8003
ATGGGTTCCGAGTTTGGCGTGACGCCCGACACCAAGCCTGAGCTCCGGCTCGATGGCGTCGGCGTCTTCTGGATC
GTCTTTGCCGTCATCTGGACCCTCATCGTCCTCGGTGGCATGACCTTTCTCTATGTGCGGCGTGACATCCCGCTT
CTCCGGATCAGAGGTCTGCCGTTATCGCTGGCATCCGTCGCCTTGTTGCATTTCTACTGGTTCGCCGTCACGCTG
GGCTACGTCTATGGGCCCTTGATGCCCGAGGTGTCGGAGTTCTGGATCATGAGTATATGGTTCCCGTTCGGTATC
GCTTTGTTCCATGCCTCCAACAGCCGCTTCCTCTATGTGGCTCGCGCGCAGAAGAAGTACGTCATGAGCGCCGTC
GACTCTGGCTGGGACCCGAACCGGCCGCGCATTCGCAAGACGCTGCTGGCCCGGTGGAGGATGCTGGATTACAGC
TACAAGATGCTGCTGCTTGTCGGCCTCGGCATGGCTTTACAGCTCTTCCTCACCCTCTTCATGTTCATCATCTCG
CGCAAGTTCCACTCCTCCGTGGGCATCCCCGGGACCGAGGTCACCGGCACCCCCATGGAGCAGAAGACGGAGCAA
GGTCGCGGATGGGAGTGGTGGCCGTCTGTCTTCTGGCAGATCTTCTGGGCCTGGGTCGTGGCCCCCGTCATCCTA
TGGCGCGCTCGTCACCTTCGTGATACCCAGGGTTGGCGTGCCCAGACGATTGCGTGCTGTATATCAGGCCTCCAT
GCTGCTCCCATGTGGCTCGTCGCCCTCTATGCGCCGGGAATGGCTCCCGTCAACCAGTACTTCATCCCTCCGCAA
TGGATCGCCGTATCCATCATGATGATGGAGATATTCACCATCTTCATCCCCTGCTGGGAGGTCCGCAAGCAGCAA
GCGCTCTGCCAAGAGACGCTTGACTCCATCGCCAGATGGGAGTCACGGCAGAAGTCGGCGACTCACTGCGGCAAG
TCGCTGACATCCGGCGCGCCGTCGTGGATGCGCAAGGCCGAGTCCATCAGCAGCTCTGGCAACGGCAGTATCCTG
ACCATGGACGCGCTGGAGCACACGCTGGCCAAGAACCCGGAGCCGCTGCAGCACTTCTCGGCTCTGCGCGACTTC
TCGGGCGAGAACATCGCCTTCCTGACGAGGATTCGCGAGTGGCGTGCCACGTATCTGTTACCTGCGAGTCGTGTC
GCTGCCGCTGGTCTAGAAGACGAAGAGAAAAAGGGGGGGACGGGTACAGGGCCGCAGGTGTCGACTCTGTCGAGG
GAGTGCTTCGAGAGTGCGCTGCGCATCTACATGGACTTCATCAGCAGCAACAGCGCCGAGTTCCAGGTCAACCTC
TCGTCTCAGGACTTCAAGAACCTTCAGGCTGTCTTTGAGCCCGCTGCTCGCGCCATCTACGGAGACAACGCCAGC
CCAGACCCGGCCACGCCTTTCGACGAGGCTCCTCGCCAACTGACTGCCGATTCACAGGATCGGATACGGTTCCGC
GGCGACATTCCCGTCCACTTCTCCGACACTGTCTTTGACGACTCCGAGATGAGCATCAAGTACCTCGTTCTGACC
AACACCTGGCCCAAGTTTATCAAGGAGAGGCGCTCGTTTGATGCCGCCAGCAGCGTCGAGTCTGCCCGGACC
Transcript >Ophio5|8003
ATGGGTTCCGAGTTTGGCGTGACGCCCGACACCAAGCCTGAGCTCCGGCTCGATGGCGTCGGCGTCTTCTGGATC
GTCTTTGCCGTCATCTGGACCCTCATCGTCCTCGGTGGCATGACCTTTCTCTATGTGCGGCGTGACATCCCGCTT
CTCCGGATCAGAGGTCTGCCGTTATCGCTGGCATCCGTCGCCTTGTTGCATTTCTACTGGTTCGCCGTCACGCTG
GGCTACGTCTATGGGCCCTTGATGCCCGAGGTGTCGGAGTTCTGGATCATGAGTATATGGTTCCCGTTCGGTATC
GCTTTGTTCCATGCCTCCAACAGCCGCTTCCTCTATGTGGCTCGCGCGCAGAAGAAGTACGTCATGAGCGCCGTC
GACTCTGGCTGGGACCCGAACCGGCCGCGCATTCGCAAGACGCTGCTGGCCCGGTGGAGGATGCTGGATTACAGC
TACAAGATGCTGCTGCTTGTCGGCCTCGGCATGGCTTTACAGCTCTTCCTCACCCTCTTCATGTTCATCATCTCG
CGCAAGTTCCACTCCTCCGTGGGCATCCCCGGGACCGAGGTCACCGGCACCCCCATGGAGCAGAAGACGGAGCAA
GGTCGCGGATGGGAGTGGTGGCCGTCTGTCTTCTGGCAGATCTTCTGGGCCTGGGTCGTGGCCCCCGTCATCCTA
TGGCGCGCTCGTCACCTTCGTGATACCCAGGGTTGGCGTGCCCAGACGATTGCGTGCTGTATATCAGGCCTCCAT
GCTGCTCCCATGTGGCTCGTCGCCCTCTATGCGCCGGGAATGGCTCCCGTCAACCAGTACTTCATCCCTCCGCAA
TGGATCGCCGTATCCATCATGATGATGGAGATATTCACCATCTTCATCCCCTGCTGGGAGGTCCGCAAGCAGCAA
GCGCTCTGCCAAGAGACGCTTGACTCCATCGCCAGATGGGAGTCACGGCAGAAGTCGGCGACTCACTGCGGCAAG
TCGCTGACATCCGGCGCGCCGTCGTGGATGCGCAAGGCCGAGTCCATCAGCAGCTCTGGCAACGGCAGTATCCTG
ACCATGGACGCGCTGGAGCACACGCTGGCCAAGAACCCGGAGCCGCTGCAGCACTTCTCGGCTCTGCGCGACTTC
TCGGGCGAGAACATCGCCTTCCTGACGAGGATTCGCGAGTGGCGTGCCACGTATCTGTTACCTGCGAGTCGTGTC
GCTGCCGCTGGTCTAGAAGACGAAGAGAAAAAGGGGGGGACGGGTACAGGGCCGCAGGTGTCGACTCTGTCGAGG
GAGTGCTTCGAGAGTGCGCTGCGCATCTACATGGACTTCATCAGCAGCAACAGCGCCGAGTTCCAGGTCAACCTC
TCGTCTCAGGACTTCAAGAACCTTCAGGCTGTCTTTGAGCCCGCTGCTCGCGCCATCTACGGAGACAACGCCAGC
CCAGACCCGGCCACGCCTTTCGACGAGGCTCCTCGCCAACTGACTGCCGATTCACAGGATCGGATACGGTTCCGC
GGCGACATTCCCGTCCACTTCTCCGACACTGTCTTTGACGACTCCGAGATGAGCATCAAGTACCTCGTTCTGACC
AACACCTGGCCCAAGTTTATCAAGGAGAGGCGCTCGTTTGATGCCGCCAGCAGCGTCGAGTCTGCCCGGACCTGA
Gene >Ophio5|8003
ATGGGTTCCGAGTTTGGCGTGACGCCCGACACCAAGCCTGAGCTCCGGCTCGATGGCGTCGGCGTCTTCTGGATC
GTCTTTGCCGTCATCTGGACCCTCATCGTCCTCGGTGGCATGACCTTTCTCTATGTGCGGCGTGACATCCCGCTT
CTCCGGATCAGAGGTCTGCCGTTATCGCTGGCATCCGTCGCCTTGTTGCATTTCTACTGGTTCGCCGTCACGCTG
GGCTACGTCTATGGGCCCTTGATGCCCGAGGTGTCGGAGTTCTGGATCATGAGTATATGGTTCCCGTTCGGTATC
GCTTTGTTCCATGCCTCCAACAGCCGCTTCCTCTATGTGGCTCGCGCGCAGAAGAAGTACGTCATGAGCGCCGTC
GACTCTGGCTGGGACCCGAACCGGCCGCGCATTCGCAAGACGCTGCTGGCCCGGTGGAGGATGCTGGATTACAGC
TACAAGATGCTGCTGCTTGTCGGCCTCGGCATGGCTTTACAGGTGAGTGGGTTGTGAAGGGGAGATGGTCGAGAC
AGGTTTCATGACTTATAGTAATAATGCTATACAACGACATATCGGCTGACAAGCCGTTAACACAGCTCTTCCTCA
CCCTCTTCATGTTCATCATCTCGCGCAAGTTCCACTCCTCCGTGGGCATCCCCGGGACCGAGGTCACCGGCACCC
CCATGGAGCAGAAGACGGAGCAAGGTCGCGGATGGGAGTGGTATGTAGACCAGCCATCTTTCTCGGACACGGTTC
GGCCGGCTTACACAACGCAGGTGGCCGTCTGTCTTCTGGCAGATCTTCTGGGCCTGGGTCGTGGCCCCCGTCATC
CTATGGCGCGCTCGTCACCTTCGTGATACCCAGGGTTGGCGTGCCCAGACGATTGCGTGCTGTATATCAGGGTGA
GTGTGTGTGGTCCGGGGCAGGCAAGCAAGAGGCGTCAAGGGAGCCGAGAGTCAGCCACAACTAACTACCCTGCCT
TACAGCCTCCATGCTGCTCCCATGTGGCTCGTCGCCCTCTATGCGCCGGGAATGGCTCCCGTCAACCAGTACTTC
ATCCCTCCGCAATGGATCGCCGTATCCATCATGATGATGGAGATATTCACCATCTTCATCCCCTGCTGGGAGGTC
CGCAAGCAGCAAGCGCTCTGCCAAGAGACGCTTGACTCCATCGCCAGATGGGAGTCACGGCAGAAGTCGGCGACT
CACTGCGGCAAGTCGCTGACATCCGGCGCGCCGTCGTGGATGCGCAAGGCCGAGTCCATCAGCAGCTCTGGCAAC
GGCAGTATCCTGACCATGGACGCGCTGGAGCACACGCTGGCCAAGAACCCGGAGCCGCTGCAGCACTTCTCGGCT
CTGCGCGACTTCTCGGGCGAGAACATCGCCTTCCTGACGAGGATTCGCGAGTGGCGTGCCACGTATCTGTTACCT
GCGAGTCGTGTCGCTGCCGCTGGTCTAGAAGACGAAGAGAAAAAGGGGGGGACGGGTACAGGGCCGCAGGTGTCG
ACTCTGTCGAGGGAGTGCTTCGAGAGTGCGCTGCGCATCTACATGGACTTCATCAGCAGCAACAGCGCCGAGTTC
CAGGTCAACCTCTCGTCTCAGGACTTCAAGAACCTTCAGGCTGTCTTTGAGCCCGCTGCTCGCGCCATCTACGGA
GACAACGCCAGCCCAGACCCGGCCACGCCTTTCGACGAGGCTCCTCGCCAACTGACTGCCGATTCACAGGATCGG
ATACGGTTCCGCGGCGACATTCCCGTCCACTTCTCCGACACTGTCTTTGACGACTCCGAGATGAGCATCAAGTAC
CTCGTTCTGACCAACACCTGGCCCAAGTTTATCAAGGAGAGGCGCTCGTTTGATGCCGCCAGCAGCGTCGAGTCT
GCCCGGACCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail