Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7997
Gene name
Locationscaffold_836:1598..2570
Strand+
Gene length (bp)972
Transcript length (bp)972
Coding sequence length (bp)969
Protein length (aa) 323

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 44 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 296 318 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7997
MPTTNRVLIPTDGYLYYLRVCWPVVQSGLAIFAILVILRRCLTSFCWSRRRIVVVGEEEEEEEEKGEEDAGLEAQ
ILEREKEREREKEKKGVTMMGDDIVEEAEEEVEEEEKEDSKQSLKSDDEQPLIGQENYGAGSATVPPPLPPPFLT
RIPPAPPLTPPELSNTIFTVEEAPHRQDSFIHQPNPDYLTSTAPLSSTTITTTPSSSSSSSSSSRPRRRSYTRTL
PIGIPMPRSASSHADLTFSPRSYPPTSPLLPPPPPSPQPERTMRRRDVDVRGEIISVLDHGGAGWTRHTRVYGGG
VCLACAAAGGGFYGATVSPEEMS
Coding >Ophio5|7997
ATGCCGACGACCAATCGAGTATTAATACCGACGGATGGCTACCTTTATTACTTGAGGGTTTGCTGGCCCGTCGTT
CAATCCGGTTTGGCTATTTTCGCTATCCTTGTTATTCTTCGTCGTTGCTTGACGTCGTTTTGTTGGAGTCGCAGG
CGCATTGTTGTTGTTGGTGAAGAAGAAGAAGAAGAAGAAGAAAAAGGAGAAGAAGACGCTGGATTGGAGGCGCAG
ATATTGGAGAGGGAGAAGGAGAGGGAGAGGGAAAAGGAGAAGAAAGGAGTGACGATGATGGGAGATGATATCGTC
GAGGAGGCGGAGGAGGAAGTGGAGGAGGAAGAGAAGGAGGACTCGAAGCAGAGTCTCAAGTCGGATGACGAACAA
CCCCTGATCGGCCAAGAAAACTACGGGGCCGGATCGGCCACGGTCCCTCCTCCGCTTCCTCCGCCTTTCCTTACA
CGGATCCCGCCCGCGCCGCCTCTAACTCCACCGGAACTCAGCAACACCATCTTCACCGTTGAAGAAGCTCCCCAC
CGACAAGACAGCTTCATCCACCAACCCAACCCGGATTATCTCACCAGCACCGCTCCCCTCTCTTCAACCACAATC
ACAACCACTCCGTCATCGTCATCGTCGTCGTCTTCGTCATCCCGTCCGCGTCGCCGTTCCTACACCCGCACCTTA
CCCATCGGCATTCCCATGCCTCGATCCGCCTCTTCCCATGCCGACTTGACCTTTTCGCCTAGGTCGTATCCGCCT
ACCAGCCCTCTACTCCCACCACCACCACCATCACCGCAGCCGGAGAGGACGATGAGGAGGAGAGATGTCGATGTT
AGGGGTGAGATCATCTCCGTTCTCGATCATGGCGGCGCTGGTTGGACTCGTCATACTCGTGTCTACGGTGGGGGG
GTCTGCCTGGCTTGTGCCGCCGCCGGAGGAGGTTTCTATGGCGCGACTGTGTCGCCTGAGGAGATGAGC
Transcript >Ophio5|7997
ATGCCGACGACCAATCGAGTATTAATACCGACGGATGGCTACCTTTATTACTTGAGGGTTTGCTGGCCCGTCGTT
CAATCCGGTTTGGCTATTTTCGCTATCCTTGTTATTCTTCGTCGTTGCTTGACGTCGTTTTGTTGGAGTCGCAGG
CGCATTGTTGTTGTTGGTGAAGAAGAAGAAGAAGAAGAAGAAAAAGGAGAAGAAGACGCTGGATTGGAGGCGCAG
ATATTGGAGAGGGAGAAGGAGAGGGAGAGGGAAAAGGAGAAGAAAGGAGTGACGATGATGGGAGATGATATCGTC
GAGGAGGCGGAGGAGGAAGTGGAGGAGGAAGAGAAGGAGGACTCGAAGCAGAGTCTCAAGTCGGATGACGAACAA
CCCCTGATCGGCCAAGAAAACTACGGGGCCGGATCGGCCACGGTCCCTCCTCCGCTTCCTCCGCCTTTCCTTACA
CGGATCCCGCCCGCGCCGCCTCTAACTCCACCGGAACTCAGCAACACCATCTTCACCGTTGAAGAAGCTCCCCAC
CGACAAGACAGCTTCATCCACCAACCCAACCCGGATTATCTCACCAGCACCGCTCCCCTCTCTTCAACCACAATC
ACAACCACTCCGTCATCGTCATCGTCGTCGTCTTCGTCATCCCGTCCGCGTCGCCGTTCCTACACCCGCACCTTA
CCCATCGGCATTCCCATGCCTCGATCCGCCTCTTCCCATGCCGACTTGACCTTTTCGCCTAGGTCGTATCCGCCT
ACCAGCCCTCTACTCCCACCACCACCACCATCACCGCAGCCGGAGAGGACGATGAGGAGGAGAGATGTCGATGTT
AGGGGTGAGATCATCTCCGTTCTCGATCATGGCGGCGCTGGTTGGACTCGTCATACTCGTGTCTACGGTGGGGGG
GTCTGCCTGGCTTGTGCCGCCGCCGGAGGAGGTTTCTATGGCGCGACTGTGTCGCCTGAGGAGATGAGCTGA
Gene >Ophio5|7997
ATGCCGACGACCAATCGAGTATTAATACCGACGGATGGCTACCTTTATTACTTGAGGGTTTGCTGGCCCGTCGTT
CAATCCGGTTTGGCTATTTTCGCTATCCTTGTTATTCTTCGTCGTTGCTTGACGTCGTTTTGTTGGAGTCGCAGG
CGCATTGTTGTTGTTGGTGAAGAAGAAGAAGAAGAAGAAGAAAAAGGAGAAGAAGACGCTGGATTGGAGGCGCAG
ATATTGGAGAGGGAGAAGGAGAGGGAGAGGGAAAAGGAGAAGAAAGGAGTGACGATGATGGGAGATGATATCGTC
GAGGAGGCGGAGGAGGAAGTGGAGGAGGAAGAGAAGGAGGACTCGAAGCAGAGTCTCAAGTCGGATGACGAACAA
CCCCTGATCGGCCAAGAAAACTACGGGGCCGGATCGGCCACGGTCCCTCCTCCGCTTCCTCCGCCTTTCCTTACA
CGGATCCCGCCCGCGCCGCCTCTAACTCCACCGGAACTCAGCAACACCATCTTCACCGTTGAAGAAGCTCCCCAC
CGACAAGACAGCTTCATCCACCAACCCAACCCGGATTATCTCACCAGCACCGCTCCCCTCTCTTCAACCACAATC
ACAACCACTCCGTCATCGTCATCGTCGTCGTCTTCGTCATCCCGTCCGCGTCGCCGTTCCTACACCCGCACCTTA
CCCATCGGCATTCCCATGCCTCGATCCGCCTCTTCCCATGCCGACTTGACCTTTTCGCCTAGGTCGTATCCGCCT
ACCAGCCCTCTACTCCCACCACCACCACCATCACCGCAGCCGGAGAGGACGATGAGGAGGAGAGATGTCGATGTT
AGGGGTGAGATCATCTCCGTTCTCGATCATGGCGGCGCTGGTTGGACTCGTCATACTCGTGTCTACGGTGGGGGG
GTCTGCCTGGCTTGTGCCGCCGCCGGAGGAGGTTTCTATGGCGCGACTGTGTCGCCTGAGGAGATGAGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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