© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|7949 |
| Gene name | |
| Location | scaffold_823:4457..6535 |
| Strand | + |
| Gene length (bp) | 2078 |
| Transcript length (bp) | 1740 |
| Coding sequence length (bp) | 1737 |
| Protein length (aa) | 579 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 5.4E-07 | 45 | 195 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0090729 | toxin activity | Yes |
| GO:0005615 | extracellular space | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1827 | 0.0942 | 0.9209 | 0.1087 | 0.0709 | 0.0169 | 0.2801 | 0.2441 | 0.263 | 0.0037 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 23 | 0.999177 |
| Orthofinder run ID | 4 |
| Orthogroup | 2 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|7949 MHGANIFFLAAALWLSWLGAGNTSSLPSNTILFRRSRAQLPVRIVYRGDERSPEEIRHTGGFQPWGRNWDANELS YSIDRHYSAGPRGCGLDDYDENNPNYQFQSAFVSVTHELGTAQGYGDWMYEITATPNMLYVLDDDDEVYPQGEIF ALGGVYWGQIRRYTRAPVTEGAHVQESDWILNPEYDAQLYERSEHVANTRVSVDFPSELIDGQADSGDEEIDSES DDSQDRRPLYNTAVHFVDDHAYELVGSFPLQFAEYPLVNLDVPGPPHPQGTAVAEYPLVNFDDPEAPQPQGSAVV GVEELVNRELRMYTELDSEQMNTFFPESSSPGNWKVERRSSKAGRTNDCCKLVSRIRKMKATKTHKKTHKDYYRV KMCVSDTFHPSCTSIRAGRDGKCFNLPAELKNNVSSLRPQSAAGTCTFYQIPDCGGLSFNASWPGMSLYRRDDLG LFNDQVQSLRCDGVKVCGRGMPDVPWCRRSHKFCDFVDELKVKFELGDEDSSSSGTWDTIMLSLSTARSSTVIQL AKEPSAGFSIDKDIDLFETFKSEKIALADINNLGLLDLPNKGYNRKDAWQFKGK |
| Coding | >Ophio5|7949 ATGCACGGCGCCAACATATTTTTCTTAGCCGCTGCTCTGTGGCTCTCTTGGCTAGGGGCTGGCAATACCTCTTCC CTACCATCGAACACTATCCTTTTTCGTCGATCCCGTGCTCAACTACCGGTTCGAATAGTCTATCGTGGAGACGAG AGGAGCCCTGAGGAGATTAGGCATACCGGCGGATTCCAGCCTTGGGGCCGGAACTGGGACGCAAACGAGTTATCA TACTCTATAGATCGCCATTATTCCGCCGGTCCGCGCGGCTGTGGTCTGGACGATTACGACGAAAACAACCCAAAT TACCAATTCCAATCGGCATTCGTTTCAGTAACACATGAGTTGGGAACAGCACAAGGGTATGGCGATTGGATGTAC GAGATCACTGCGACACCAAATATGCTTTATGTACTCGACGACGACGACGAAGTATATCCCCAAGGTGAGATTTTC GCCTTAGGCGGTGTTTACTGGGGACAGATAAGGAGATATACACGTGCACCGGTGACGGAAGGCGCCCACGTGCAA GAGTCTGACTGGATCCTCAATCCGGAATACGATGCTCAACTCTATGAACGATCCGAACATGTCGCTAATACCCGC GTGAGTGTCGACTTTCCCAGCGAGCTCATCGATGGTCAAGCCGACAGCGGCGACGAGGAAATCGATAGCGAAAGC GATGATAGCCAAGACAGGCGCCCCCTTTATAACACGGCTGTGCATTTCGTGGATGACCATGCGTATGAACTCGTT GGTAGCTTCCCGCTTCAGTTCGCGGAATACCCTCTTGTGAATCTCGACGTTCCAGGACCGCCGCACCCACAGGGA ACCGCCGTTGCGGAATACCCTCTTGTGAATTTCGACGATCCAGAAGCGCCGCAGCCGCAGGGGAGCGCCGTTGTC GGTGTGGAGGAACTAGTCAATAGAGAGCTGCGAATGTATACCGAACTCGACAGCGAACAAATGAACACGTTCTTC CCCGAGAGCAGCTCGCCGGGGAACTGGAAAGTCGAACGAAGAAGTAGTAAAGCAGGCAGAACAAATGACTGCTGC AAGCTGGTTTCTAGGATTAGGAAGATGAAGGCCACAAAGACGCACAAGAAGACGCACAAAGACTACTACCGCGTC AAGATGTGCGTCAGTGATACCTTCCACCCATCGTGTACCAGCATCAGAGCCGGCCGAGATGGAAAGTGCTTTAAT CTGCCGGCTGAATTGAAGAATAATGTGTCTTCATTACGTCCACAGTCGGCGGCCGGAACTTGCACTTTTTACCAA ATACCTGACTGTGGCGGCCTTTCGTTCAACGCGTCCTGGCCGGGCATGTCTCTTTATCGCAGAGATGACTTAGGT CTATTCAACGACCAGGTTCAATCGCTCCGCTGTGACGGCGTCAAGGTGTGTGGTCGCGGGATGCCCGATGTGCCA TGGTGCCGGCGCAGCCACAAGTTCTGTGACTTCGTCGACGAACTCAAGGTCAAGTTTGAACTGGGAGACGAAGAT TCGTCTTCGTCGGGAACTTGGGATACAATAATGCTCTCCCTCAGCACCGCTCGGTCGTCTACTGTGATTCAGCTA GCGAAAGAACCCTCGGCAGGATTTTCTATCGACAAAGACATTGACCTGTTTGAGACATTCAAGTCCGAAAAGATA GCCCTTGCGGATATTAACAATTTAGGGTTACTAGATCTACCTAACAAGGGGTATAATAGGAAGGACGCGTGGCAG TTCAAAGGTAAG |
| Transcript | >Ophio5|7949 ATGCACGGCGCCAACATATTTTTCTTAGCCGCTGCTCTGTGGCTCTCTTGGCTAGGGGCTGGCAATACCTCTTCC CTACCATCGAACACTATCCTTTTTCGTCGATCCCGTGCTCAACTACCGGTTCGAATAGTCTATCGTGGAGACGAG AGGAGCCCTGAGGAGATTAGGCATACCGGCGGATTCCAGCCTTGGGGCCGGAACTGGGACGCAAACGAGTTATCA TACTCTATAGATCGCCATTATTCCGCCGGTCCGCGCGGCTGTGGTCTGGACGATTACGACGAAAACAACCCAAAT TACCAATTCCAATCGGCATTCGTTTCAGTAACACATGAGTTGGGAACAGCACAAGGGTATGGCGATTGGATGTAC GAGATCACTGCGACACCAAATATGCTTTATGTACTCGACGACGACGACGAAGTATATCCCCAAGGTGAGATTTTC GCCTTAGGCGGTGTTTACTGGGGACAGATAAGGAGATATACACGTGCACCGGTGACGGAAGGCGCCCACGTGCAA GAGTCTGACTGGATCCTCAATCCGGAATACGATGCTCAACTCTATGAACGATCCGAACATGTCGCTAATACCCGC GTGAGTGTCGACTTTCCCAGCGAGCTCATCGATGGTCAAGCCGACAGCGGCGACGAGGAAATCGATAGCGAAAGC GATGATAGCCAAGACAGGCGCCCCCTTTATAACACGGCTGTGCATTTCGTGGATGACCATGCGTATGAACTCGTT GGTAGCTTCCCGCTTCAGTTCGCGGAATACCCTCTTGTGAATCTCGACGTTCCAGGACCGCCGCACCCACAGGGA ACCGCCGTTGCGGAATACCCTCTTGTGAATTTCGACGATCCAGAAGCGCCGCAGCCGCAGGGGAGCGCCGTTGTC GGTGTGGAGGAACTAGTCAATAGAGAGCTGCGAATGTATACCGAACTCGACAGCGAACAAATGAACACGTTCTTC CCCGAGAGCAGCTCGCCGGGGAACTGGAAAGTCGAACGAAGAAGTAGTAAAGCAGGCAGAACAAATGACTGCTGC AAGCTGGTTTCTAGGATTAGGAAGATGAAGGCCACAAAGACGCACAAGAAGACGCACAAAGACTACTACCGCGTC AAGATGTGCGTCAGTGATACCTTCCACCCATCGTGTACCAGCATCAGAGCCGGCCGAGATGGAAAGTGCTTTAAT CTGCCGGCTGAATTGAAGAATAATGTGTCTTCATTACGTCCACAGTCGGCGGCCGGAACTTGCACTTTTTACCAA ATACCTGACTGTGGCGGCCTTTCGTTCAACGCGTCCTGGCCGGGCATGTCTCTTTATCGCAGAGATGACTTAGGT CTATTCAACGACCAGGTTCAATCGCTCCGCTGTGACGGCGTCAAGGTGTGTGGTCGCGGGATGCCCGATGTGCCA TGGTGCCGGCGCAGCCACAAGTTCTGTGACTTCGTCGACGAACTCAAGGTCAAGTTTGAACTGGGAGACGAAGAT TCGTCTTCGTCGGGAACTTGGGATACAATAATGCTCTCCCTCAGCACCGCTCGGTCGTCTACTGTGATTCAGCTA GCGAAAGAACCCTCGGCAGGATTTTCTATCGACAAAGACATTGACCTGTTTGAGACATTCAAGTCCGAAAAGATA GCCCTTGCGGATATTAACAATTTAGGGTTACTAGATCTACCTAACAAGGGGTATAATAGGAAGGACGCGTGGCAG TTCAAAGGTAAGTAA |
| Gene | >Ophio5|7949 ATGCACGGCGCCAACATATTTTTCTTAGCCGCTGCTCTGTGGCTCTCTTGGCTAGGGGCTGGCAATACCTCTTCC CTACCATCGAACACTATCCTTTTTCGTCGATCCCGTGCTCAACTACCGGTTCGAATAGTCTATCGTGGAGACGAG AGGAGCCCTGAGGAGATTAGGCATACCGGCGGATTCCAGCCTTGGGGCCGGAACTGGGACGCAAACGAGTTATCA TACTCTATAGATCGCCATTATTCCGCCGGTCCGCGCGGCTGTGGTCTGGACGATTACGACGAAAACAACCCAAAT TACCAATTCCAATCGGCATTCGTTTCAGTAACACATGAGTTGGGAACAGCACAAGGGTATGGCGATTGGATGTAC GAGATCACTGCGACACCAAATATGCTTTATGTACTCGACGACGACGACGAAGTATATCCCCAAGGTGAGATTTTC GCCTTAGGCGGTGTTTACTGGGGACAGATAAGGAGATATACACGTGCACCGGTGACGGAAGGCGCCCACGTGCAA GAGTCTGACTGGATCCTCAATCCGGAATACGATGCTCAACTCTATGAACGATCCGAACATGTCGCTAATACCCGC GTGAGTGTCGACTTTCCCAGCGAGCTCATCGATGGTCAAGCCGACAGCGGCGACGAGGAAATCGATAGCGAAAGC GATGATAGCCAAGACAGGCGCCCCCTTTATAACACGGCTGTGCATTTCGTGGATGACCATGCGTATGAACTCGTT GGTAGCTTCCCGCTTCAGTTCGCGGAATACCCTCTTGTGAATCTCGACGTTCCAGGACCGCCGCACCCACAGGGA ACCGCCGTTGCGGAATACCCTCTTGTGAATTTCGACGATCCAGAAGCGCCGCAGCCGCAGGGGAGCGCCGTTGTC GGTGTGGAGGAACTAGGTAAGAAGAGAGGCAGCCCGACGAAGACACCGTGCATGCTAACATGGACCACATTAGTC AATAGAGAGCTGCGAATGTATACCGAACTCGACAGCGAACAAATGAACACGTTCTTCCCCGAGAGCAGCGTGTTC TTGAGGGAGCTCAATGATCCGAATAACCGTCAGGGCGCTTGTGCCGCATTACTCAACATTTAGTCGCCGGGGAAC TGGAAAGTCGAACGAAGAAGTAGTAAAGCAGGTAAGGGCCATAGAGTGGCATATAAAGGGAACAGCAATGAGACT GATGTTTTTTCCCCGCACGGCAAGGCAGAACAAATGACTGCTGCAAGCTGGTTTCTAGGATTAGGAAGATGAAGG CCACAAAGACGCACAAGAAGACGCACAAAGACTACTACCGCGTCAAGATGTGCGTCAGTGATACCTTCCACCCAT CGTGTACCAGCATCAGAGCCGGCCGAGATGGAAAGTGCTGTATGGCGTTTACGTCCCGTTTGGCTGCCAGTTCAC ACTTCAGCCGTGTGTGATGACGCCGCTAACAGTTGGATCAAGTTAATCTGCCGGCTGAATTGAAGAATAATGTGT CTTCATTACGTCCACAGTCGGCGGCCGGAACTTGCACTTTTTACCAGTTAGTTAATTGCCTTCCCTTCACTGATC CGGGACACGATAATGGGTGGTTGACTATGCTATGCAGAATACCTGACTGTGGCGGCCTTTCGTTCAACGCGTCCT GGCCGGGCATGTCTCTTTATCGCAGAGATGACTTAGGTCTATTCAACGACCAGGTTCAATCGCTCCGCTGTGACG GCGTCAAGGTGTGTGGTCGCGGGATGCCCGATGTGCCATGGTGCCGGCGCAGCCACAAGTTCTGTGACTTCGTCG ACGAACTCAAGGTCAAGTTTGAACTGGGAGACGAAGATTCGTCTTCGTCGGGAACTTGGGATACAATAATGCTCT CCCTCAGCACCGCTCGGTCGTCTACTGTGATTCAGCTAGCGAAAGAACCCTCGGCAGGATTTTCTATCGACAAAG ACATTGACCTGTTTGAGACATTCAAGTCCGAAAAGATAGCCCTTGCGGATATTAACAATTTAGGGTTACTAGATC TACCTAACAAGGGGTATAATAGGAAGGACGCGTGGCAGTTCAAAGGTAAGTAA |