© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|7933 |
| Gene name | |
| Location | scaffold_82:42590..43136 |
| Strand | - |
| Gene length (bp) | 546 |
| Transcript length (bp) | 546 |
| Coding sequence length (bp) | 543 |
| Protein length (aa) | 181 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1112 | 0.0683 | 0.894 | 0.0844 | 0.0539 | 0.0093 | 0.2654 | 0.2542 | 0.1259 | 0.0029 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 19 | 0.999059 |
| Orthofinder run ID | 4 |
| Orthogroup | 7271 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-floridani | Ophcf2|01008 |
| Ophiocordyceps camponoti-rufipedis | Ophun1|7150 |
| Ophiocordyceps kimflemingae | Ophio5|7933 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|7933 MRFSASFSLLCFTAGVCSGHQTVNINSIQHGVDVITAGVSHLSQVIHNYGVNMKILEPTWETYFLTLENGIAEVE RAQPIISDQELQVLLPTLARGIKAFTSLIEIEIKSRRDEVFESGLCLPFRQFTEKQTLVASHWDGALHSKIPLKF WSMYPELNEKVVMGLLQELRSMFGDCKATKH |
| Coding | >Ophio5|7933 ATGCGCTTCTCCGCCAGCTTCTCCCTCTTGTGCTTCACCGCAGGAGTCTGCTCCGGCCACCAGACCGTCAACATA AACTCCATTCAGCATGGCGTGGACGTGATAACTGCCGGGGTCTCGCACTTGTCGCAAGTTATTCATAACTATGGC GTCAACATGAAAATTTTGGAACCGACTTGGGAGACATACTTTCTCACCCTTGAAAATGGTATCGCAGAGGTTGAA AGAGCCCAGCCGATCATATCAGATCAAGAGCTACAGGTTCTTCTTCCGACACTCGCGAGGGGCATCAAAGCTTTC ACGAGCCTGATCGAAATCGAAATCAAGTCCAGGCGAGATGAAGTGTTCGAGTCCGGCCTTTGCCTTCCGTTTCGT CAGTTCACAGAGAAGCAAACACTCGTCGCAAGTCATTGGGATGGAGCACTGCATTCCAAGATTCCCCTCAAATTC TGGTCCATGTACCCTGAGCTGAACGAAAAGGTGGTGATGGGCCTTCTGCAGGAGCTCCGAAGCATGTTTGGTGAT TGCAAGGCCACCAAACAT |
| Transcript | >Ophio5|7933 ATGCGCTTCTCCGCCAGCTTCTCCCTCTTGTGCTTCACCGCAGGAGTCTGCTCCGGCCACCAGACCGTCAACATA AACTCCATTCAGCATGGCGTGGACGTGATAACTGCCGGGGTCTCGCACTTGTCGCAAGTTATTCATAACTATGGC GTCAACATGAAAATTTTGGAACCGACTTGGGAGACATACTTTCTCACCCTTGAAAATGGTATCGCAGAGGTTGAA AGAGCCCAGCCGATCATATCAGATCAAGAGCTACAGGTTCTTCTTCCGACACTCGCGAGGGGCATCAAAGCTTTC ACGAGCCTGATCGAAATCGAAATCAAGTCCAGGCGAGATGAAGTGTTCGAGTCCGGCCTTTGCCTTCCGTTTCGT CAGTTCACAGAGAAGCAAACACTCGTCGCAAGTCATTGGGATGGAGCACTGCATTCCAAGATTCCCCTCAAATTC TGGTCCATGTACCCTGAGCTGAACGAAAAGGTGGTGATGGGCCTTCTGCAGGAGCTCCGAAGCATGTTTGGTGAT TGCAAGGCCACCAAACATTGA |
| Gene | >Ophio5|7933 ATGCGCTTCTCCGCCAGCTTCTCCCTCTTGTGCTTCACCGCAGGAGTCTGCTCCGGCCACCAGACCGTCAACATA AACTCCATTCAGCATGGCGTGGACGTGATAACTGCCGGGGTCTCGCACTTGTCGCAAGTTATTCATAACTATGGC GTCAACATGAAAATTTTGGAACCGACTTGGGAGACATACTTTCTCACCCTTGAAAATGGTATCGCAGAGGTTGAA AGAGCCCAGCCGATCATATCAGATCAAGAGCTACAGGTTCTTCTTCCGACACTCGCGAGGGGCATCAAAGCTTTC ACGAGCCTGATCGAAATCGAAATCAAGTCCAGGCGAGATGAAGTGTTCGAGTCCGGCCTTTGCCTTCCGTTTCGT CAGTTCACAGAGAAGCAAACACTCGTCGCAAGTCATTGGGATGGAGCACTGCATTCCAAGATTCCCCTCAAATTC TGGTCCATGTACCCTGAGCTGAACGAAAAGGTGGTGATGGGCCTTCTGCAGGAGCTCCGAAGCATGTTTGGTGAT TGCAAGGCCACCAAACATTGA |