© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|7917 |
| Gene name | |
| Location | scaffold_82:7733..8257 |
| Strand | + |
| Gene length (bp) | 524 |
| Transcript length (bp) | 393 |
| Coding sequence length (bp) | 390 |
| Protein length (aa) | 130 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74383|YNV8_SCHPO | Uncharacterized protein C3H7.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.08c PE=4 SV=1 | 26 | 123 | 6.0E-09 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mitochondrion | Mitochondrial transit peptide | 0.1059 | 0.1206 | 0.0156 | 0.0776 | 0.9725 | 0.0385 | 0.137 | 0.0466 | 0.0745 | 0.014 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 36 | 55 | 19 |
| Orthofinder run ID | 4 |
| Orthogroup | 2107 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|7917 MASIIARRLFSTSLRRLEHVVPKEELKQESKRNPELMILGGVMVAAIGGAGFYFARTPTSATSEAPVKIADSGMP WESNTDGKYHYHPGGDPKKDPKQAPSALSVVVVPDVTLPKELHDKFNKWGKDGYP |
| Coding | >Ophio5|7917 ATGGCTTCTATAATTGCCCGCCGTCTTTTCTCCACGTCGCTCCGTCGTCTGGAGCACGTCGTTCCCAAGGAGGAG CTCAAACAAGAGTCGAAGCGCAACCCGGAACTGATGATACTCGGCGGCGTCATGGTCGCTGCCATCGGCGGCGCT GGCTTCTACTTTGCCCGAACACCGACCAGCGCGACCTCGGAGGCCCCCGTCAAAATCGCCGACAGCGGCATGCCC TGGGAGTCCAATACCGACGGCAAGTACCACTATCACCCCGGCGGCGATCCCAAGAAGGACCCCAAACAGGCGCCG AGCGCCCTCAGCGTCGTCGTCGTGCCCGACGTCACCCTTCCCAAGGAGTTGCACGACAAATTCAACAAGTGGGGC AAGGACGGCTATCCC |
| Transcript | >Ophio5|7917 ATGGCTTCTATAATTGCCCGCCGTCTTTTCTCCACGTCGCTCCGTCGTCTGGAGCACGTCGTTCCCAAGGAGGAG CTCAAACAAGAGTCGAAGCGCAACCCGGAACTGATGATACTCGGCGGCGTCATGGTCGCTGCCATCGGCGGCGCT GGCTTCTACTTTGCCCGAACACCGACCAGCGCGACCTCGGAGGCCCCCGTCAAAATCGCCGACAGCGGCATGCCC TGGGAGTCCAATACCGACGGCAAGTACCACTATCACCCCGGCGGCGATCCCAAGAAGGACCCCAAACAGGCGCCG AGCGCCCTCAGCGTCGTCGTCGTGCCCGACGTCACCCTTCCCAAGGAGTTGCACGACAAATTCAACAAGTGGGGC AAGGACGGCTATCCCTGA |
| Gene | >Ophio5|7917 ATGGCTTCTATAATTGCCCGCCGTCTTTTCTCCACGTCGCTCCGTCGTCTGGAGCACGTCGTTCCCAAGGAGGAG CTCAAACAAGAGTCGAAGCGCAACCCGGAACTGATGGTATGTTCGCCTCCCAAAGGACTCTTTCAGGTTGTAGAA TCGCTGATACTCTCATCTTCTTCCTCGAACGTAGATACTCGGCGGCGTCATGGTCGCTGCCATCGGCGGCGCTGG CTTCTACTTTGGTACGCCGACCGGACTACCATCGCCGTGCCGGCTGAGCTGACGTCTCCCTGAACTCAGCCCGAA CACCGACCAGCGCGACCTCGGAGGCCCCCGTCAAAATCGCCGACAGCGGCATGCCCTGGGAGTCCAATACCGACG GCAAGTACCACTATCACCCCGGCGGCGATCCCAAGAAGGACCCCAAACAGGCGCCGAGCGCCCTCAGCGTCGTCG TCGTGCCCGACGTCACCCTTCCCAAGGAGTTGCACGACAAATTCAACAAGTGGGGCAAGGACGGCTATCCCTGA |