Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7836
Gene name
Locationscaffold_80:14263..15676
Strand-
Gene length (bp)1413
Transcript length (bp)1266
Coding sequence length (bp)1263
Protein length (aa) 421

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11327 Egh16-like Egh16-like virulence factor 3.0E-37 19 187

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7836
MHSLSSFGVVSLIFSLVRGHGTIVSVQSDVQGSPVGIGFREIIPCQQDSTIIRPEEIKANLVNPCGRTQMGGNID
VGQETEKAILENRVAFVNRGSKLQVTLHQVNADGGGPYFCDLDETSNTGIFTHCQNLTIENNVPGANGLSLVVAK
NFTMDVQLPNNFTCIGGSDGQTCTIRCQNTALAGNFGGCFPIKQVDTDPHENTIDTNPTKDTVERIATLQNIAKE
AIPQAVNNIAKAGDAQNLENANTLDQLTGTSDRKFVAFGNNVNFAGGQPQNGQPPNGQAQNGQPPNGQAQNGQPP
NGQAQNAQPPNGQAQNAQPQRGQGNQGQVGQAQRGQGNQGQVGQAQRSQAQGGQAQRGQVGQAQGGQAQGGQGNQ
GQVGQAQRGQGNQGQGNQFQGVKGNQFQNSQFQGGQTSAFSQGRGQ
Coding >Ophio5|7836
ATGCATTCTCTCTCTTCGTTCGGCGTCGTGTCACTGATATTCTCCCTGGTTCGAGGCCATGGAACTATCGTGAGT
GTGCAATCAGATGTTCAAGGGTCGCCTGTGGGTATAGGATTCCGGGAAATCATTCCTTGCCAACAGGATAGCACC
ATCATTAGGCCTGAAGAGATTAAGGCTAATTTGGTCAATCCGTGTGGCCGCACCCAGATGGGTGGAAACATTGAC
GTTGGGCAAGAAACGGAGAAGGCTATACTGGAGAATAGGGTCGCTTTTGTCAACCGTGGAAGCAAACTGCAGGTC
ACGCTTCATCAGGTCAACGCTGATGGCGGCGGCCCCTATTTCTGTGATTTGGACGAGACCAGCAACACTGGCATC
TTCACCCACTGTCAGAATCTCACTATCGAGAACAATGTTCCGGGTGCGAATGGCCTGTCGCTGGTCGTCGCGAAG
AATTTTACCATGGATGTCCAACTGCCTAATAACTTTACTTGCATTGGAGGCTCCGATGGCCAAACATGTACAATC
CGCTGCCAAAATACTGCCTTGGCTGGAAACTTTGGCGGTTGCTTCCCCATCAAACAAGTCGACACGGATCCGCAT
GAGAACACAATTGATACGAACCCCACCAAGGACACTGTCGAAAGAATCGCAACCCTGCAAAACATCGCCAAAGAG
GCAATACCCCAAGCTGTAAACAATATTGCTAAAGCTGGAGATGCGCAGAACTTGGAAAACGCGAATACCCTCGAT
CAGCTCACTGGCACAAGCGATAGAAAATTCGTTGCATTTGGCAACAATGTCAACTTCGCCGGTGGCCAGCCCCAG
AACGGTCAGCCTCCAAACGGCCAGGCCCAGAACGGTCAGCCTCCAAACGGCCAGGCCCAGAACGGTCAGCCTCCA
AACGGCCAGGCCCAGAACGCTCAGCCTCCAAACGGCCAGGCCCAGAACGCTCAGCCTCAGCGTGGCCAGGGCAAC
CAGGGCCAGGTCGGCCAGGCTCAGCGTGGCCAGGGCAACCAGGGCCAGGTCGGCCAGGCTCAGCGCAGCCAGGCT
CAGGGCGGCCAGGCTCAGCGTGGCCAGGTCGGCCAGGCTCAGGGCGGCCAGGCTCAGGGCGGCCAGGGCAACCAA
GGCCAGGTCGGCCAGGCTCAGCGTGGCCAGGGCAACCAGGGCCAGGGCAACCAGTTTCAGGGGGTCAAAGGCAAC
CAGTTCCAGAACAGTCAGTTCCAGGGCGGCCAGACCTCGGCCTTCAGCCAAGGCCGAGGCCAA
Transcript >Ophio5|7836
ATGCATTCTCTCTCTTCGTTCGGCGTCGTGTCACTGATATTCTCCCTGGTTCGAGGCCATGGAACTATCGTGAGT
GTGCAATCAGATGTTCAAGGGTCGCCTGTGGGTATAGGATTCCGGGAAATCATTCCTTGCCAACAGGATAGCACC
ATCATTAGGCCTGAAGAGATTAAGGCTAATTTGGTCAATCCGTGTGGCCGCACCCAGATGGGTGGAAACATTGAC
GTTGGGCAAGAAACGGAGAAGGCTATACTGGAGAATAGGGTCGCTTTTGTCAACCGTGGAAGCAAACTGCAGGTC
ACGCTTCATCAGGTCAACGCTGATGGCGGCGGCCCCTATTTCTGTGATTTGGACGAGACCAGCAACACTGGCATC
TTCACCCACTGTCAGAATCTCACTATCGAGAACAATGTTCCGGGTGCGAATGGCCTGTCGCTGGTCGTCGCGAAG
AATTTTACCATGGATGTCCAACTGCCTAATAACTTTACTTGCATTGGAGGCTCCGATGGCCAAACATGTACAATC
CGCTGCCAAAATACTGCCTTGGCTGGAAACTTTGGCGGTTGCTTCCCCATCAAACAAGTCGACACGGATCCGCAT
GAGAACACAATTGATACGAACCCCACCAAGGACACTGTCGAAAGAATCGCAACCCTGCAAAACATCGCCAAAGAG
GCAATACCCCAAGCTGTAAACAATATTGCTAAAGCTGGAGATGCGCAGAACTTGGAAAACGCGAATACCCTCGAT
CAGCTCACTGGCACAAGCGATAGAAAATTCGTTGCATTTGGCAACAATGTCAACTTCGCCGGTGGCCAGCCCCAG
AACGGTCAGCCTCCAAACGGCCAGGCCCAGAACGGTCAGCCTCCAAACGGCCAGGCCCAGAACGGTCAGCCTCCA
AACGGCCAGGCCCAGAACGCTCAGCCTCCAAACGGCCAGGCCCAGAACGCTCAGCCTCAGCGTGGCCAGGGCAAC
CAGGGCCAGGTCGGCCAGGCTCAGCGTGGCCAGGGCAACCAGGGCCAGGTCGGCCAGGCTCAGCGCAGCCAGGCT
CAGGGCGGCCAGGCTCAGCGTGGCCAGGTCGGCCAGGCTCAGGGCGGCCAGGCTCAGGGCGGCCAGGGCAACCAA
GGCCAGGTCGGCCAGGCTCAGCGTGGCCAGGGCAACCAGGGCCAGGGCAACCAGTTTCAGGGGGTCAAAGGCAAC
CAGTTCCAGAACAGTCAGTTCCAGGGCGGCCAGACCTCGGCCTTCAGCCAAGGCCGAGGCCAATAA
Gene >Ophio5|7836
ATGCATTCTCTCTCTTCGTTCGGCGTCGTGTCACTGATATTCTCCCTGGTTCGAGGCCATGGAACTATCGTGAGT
GTGCAATCAGATGTTCAAGGGTCGCCTGTGGGTATAGGATTCCGGGGTATGTGCAACGCCGTCTCTTGGCACTGA
TGAGCCGCAAGGCAGCTGACAAAGCTCTCGTCTAGTTGAAACCAGTCTCCCTACCAACTGTTCAGAAATCATTCC
TTGCCAACAGGATAGCACCATCATTAGGCCTGAAGAGATTAAGGCTAATTTGGTCAATCCGTGTGGCCGCACCCA
GATGGGTGGAAACATTGACGTTGGGCAAGAAACGGAGAAGGCTATACTGGAGAATAGGGTCGCTTTTGTCAACCG
TGGAAGCAAACTGCAGGTCACGCTTCATCAGGTCAACGCTGATGGCGGCGGCCCCTATTTCTGTGATTTGGACGA
GACCAGCAACACTGGCATCTTCACCCACGTGAGTCTACACCACATCACTCGTTTTGGCATGATCAATAAGTTGAC
GCATAGTGTCAGAATCTCACTATCGAGAACAATGTTCCGGGTGCGAATGGCCTGTCGCTGGTCGTCGCGAAGAAT
TTTACCATGGATGTCCAACTGCCTAATAACTTTACTTGCATTGGAGGCTCCGATGGCCAAACATGTACAATCCGC
TGCCAAAATACTGCCTTGGCTGGAAACTTTGGCGGTTGCTTCCCCATCAAACAAGTCGACACGGATCCGCATGAG
AACACAATTGATACGAACCCCACCAAGGACACTGTCGAAAGAATCGCAACCCTGCAAAACATCGCCAAAGAGGCA
ATACCCCAAGCTGTAAACAATATTGCTAAAGCTGGAGATGCGCAGAACTTGGAAAACGCGAATACCCTCGATCAG
CTCACTGGCACAAGCGATAGAAAATTCGTTGCATTTGGCAACAATGTCAACTTCGCCGGTGGCCAGCCCCAGAAC
GGTCAGCCTCCAAACGGCCAGGCCCAGAACGGTCAGCCTCCAAACGGCCAGGCCCAGAACGGTCAGCCTCCAAAC
GGCCAGGCCCAGAACGCTCAGCCTCCAAACGGCCAGGCCCAGAACGCTCAGCCTCAGCGTGGCCAGGGCAACCAG
GGCCAGGTCGGCCAGGCTCAGCGTGGCCAGGGCAACCAGGGCCAGGTCGGCCAGGCTCAGCGCAGCCAGGCTCAG
GGCGGCCAGGCTCAGCGTGGCCAGGTCGGCCAGGCTCAGGGCGGCCAGGCTCAGGGCGGCCAGGGCAACCAAGGC
CAGGTCGGCCAGGCTCAGCGTGGCCAGGGCAACCAGGGCCAGGGCAACCAGTTTCAGGGGGTCAAAGGCAACCAG
TTCCAGAACAGTCAGTTCCAGGGCGGCCAGACCTCGGCCTTCAGCCAAGGCCGAGGCCAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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