Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7835
Gene name
Locationscaffold_80:10551..13097
Strand-
Gene length (bp)2546
Transcript length (bp)1803
Coding sequence length (bp)1800
Protein length (aa) 600

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02133 Transp_cyt_pur Permease for cytosine/purines, uracil, thiamine, allantoin 2.5E-82 98 553

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O14035|YEME_SCHPO Uncharacterized permease C29B12.14c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC29B12.14c PE=3 SV=2 93 593 1.0E-84
sp|Q10279|FUR4_SCHPO Uracil permease OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fur4 PE=1 SV=2 93 598 1.0E-76
sp|Q04895|DAL4_YEAST Allantoin permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL4 PE=1 SV=1 83 572 4.0E-71
sp|P05316|FUR4_YEAST Uracil permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FUR4 PE=3 SV=2 93 572 2.0E-70
sp|Q05998|THI7_YEAST Thiamine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI7 PE=1 SV=1 64 534 1.0E-65
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Swissprot ID Swissprot Description Start End E-value
sp|O14035|YEME_SCHPO Uncharacterized permease C29B12.14c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC29B12.14c PE=3 SV=2 93 593 1.0E-84
sp|Q10279|FUR4_SCHPO Uracil permease OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fur4 PE=1 SV=2 93 598 1.0E-76
sp|Q04895|DAL4_YEAST Allantoin permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL4 PE=1 SV=1 83 572 4.0E-71
sp|P05316|FUR4_YEAST Uracil permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FUR4 PE=3 SV=2 93 572 2.0E-70
sp|Q05998|THI7_YEAST Thiamine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI7 PE=1 SV=1 64 534 1.0E-65
sp|Q08485|NRT1_YEAST Nicotinamide riboside transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NRT1 PE=1 SV=1 93 569 9.0E-65
sp|Q08579|THI72_YEAST Thiamine transporter THI72 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI72 PE=2 SV=1 93 534 3.0E-64
sp|P38196|FUI1_YEAST Uridine permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FUI1 PE=1 SV=1 80 577 1.0E-61
sp|Q9P6J5|YHD5_SCHPO Uncharacterized permease C1683.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.05 PE=3 SV=1 93 569 3.0E-59
sp|P94575|ALLP_BACSU Probable allantoin permease OS=Bacillus subtilis (strain 168) GN=pucI PE=2 SV=1 80 576 6.0E-50
sp|Q9LZD0|NCS1_ARATH Purine-uracil permease NCS1 OS=Arabidopsis thaliana GN=NCS1 PE=1 SV=1 88 564 3.0E-44
sp|P75712|ALLP_ECOLI Putative allantoin permease OS=Escherichia coli (strain K12) GN=ybbW PE=1 SV=2 93 565 2.0E-26
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GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0055085 transmembrane transport Yes
GO:0009987 cellular process No
GO:0051234 establishment of localization No
GO:0110165 cellular anatomical entity No
GO:0008150 biological_process No
GO:0005215 transporter activity No
GO:0005575 cellular_component No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 106 128 22
2 141 163 22
3 183 205 22
4 237 254 17
5 261 283 22
6 298 320 22
7 341 363 22
8 393 415 22
9 436 453 17
10 458 480 22
11 512 531 19
12 546 568 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7835
MELQNNKTTLVALNTINKTWADLKPTACTTHSVRKTVVRILQTESLSLTSGVLASADKSLIAGNMGAGWKAALDR
LQCPKDENANYENTTWCNRDLIPTPAERRTFGVWSYLGYWTVSGSNVSAWLIGSTLLAFGLSPQQAIGAVILGGL
LTGLLAVACGWMGEVHHIGFTVCSRFSWGMRGSYFPVVLRVFVGCIWFGLQAFWGGQAMRVAIGALIPGLAHLPN
RFDPNSHLQTNDFVGLVLWMCLFIPGVLIRPEKLQIGFFVCFVLFCGSCLGLLIWAVTRVGGPGSMFHEPSSAPN
VGWAFMFGLTSVLGAWGGGTLGQSDWTRYASRRYAPILSQLLASPITISVTAIIGIVVTSAARDILGGELQWNPI
FLLANIQEHYNSSSAARAGVFFASAGLVCSQLSISLVLNAMSCGMDLAGLWPKYINIRRGAYVMAIVGIATQPWQ
LLVTAGKFLTVMSGFGVFMAPATGILLADYHLVRKRRLNVEDLYTGDASSIYWFCQGFNWRAFAAFSAGVWPLLP
GLIGVVNRDESEALSGWIRLYNLTFMVGLCIAFVVFWLLNIFIPVPGLDAEVPFSIENDKTTRDGSMDHKVSSIQ
Coding >Ophio5|7835
ATGGAGCTACAAAATAATAAGACGACTTTGGTGGCTCTCAATACAATAAATAAAACATGGGCTGATCTTAAACCG
ACTGCTTGTACAACGCATTCCGTGAGGAAAACAGTCGTACGAATCCTGCAGACTGAATCCCTCTCTCTCACCTCC
GGCGTGCTCGCATCTGCCGACAAATCTCTCATAGCTGGCAATATGGGTGCTGGCTGGAAAGCAGCACTCGACAGA
CTTCAGTGCCCAAAAGATGAAAATGCCAACTACGAGAACACGACTTGGTGCAACAGGGACTTGATTCCGACGCCG
GCCGAGAGACGGACTTTTGGCGTGTGGTCCTACCTGGGCTACTGGACCGTATCCGGGTCCAACGTCTCGGCATGG
CTGATCGGTAGCACTCTCCTCGCTTTCGGGTTGAGCCCTCAGCAAGCCATCGGCGCTGTTATTTTGGGAGGCTTG
TTGACTGGTCTGCTCGCCGTCGCTTGCGGATGGATGGGAGAAGTTCACCATATTGGTTTCACCGTCTGCAGCCGC
TTCTCCTGGGGGATGCGCGGCTCATACTTCCCGGTCGTTCTCCGAGTCTTTGTTGGCTGCATTTGGTTCGGCCTA
CAGGCGTTCTGGGGAGGACAGGCAATGAGAGTCGCCATTGGGGCTTTGATTCCTGGCCTGGCCCATCTTCCCAAC
CGATTCGACCCAAACTCTCACCTGCAGACGAATGACTTTGTTGGACTGGTTCTGTGGATGTGTCTGTTCATACCA
GGCGTCCTGATTCGGCCAGAGAAGTTGCAAATTGGCTTCTTCGTCTGCTTTGTTCTCTTCTGCGGCTCTTGTCTT
GGCCTGCTCATCTGGGCGGTCACCCGAGTCGGCGGACCCGGCAGCATGTTTCACGAGCCAAGCTCAGCGCCCAAT
GTCGGATGGGCATTCATGTTTGGCCTAACCTCAGTCCTTGGAGCCTGGGGAGGCGGCACTCTCGGACAGTCAGAC
TGGACGAGGTACGCCAGCCGGAGATATGCGCCAATTCTTTCTCAGCTGTTGGCGTCCCCCATCACAATCTCGGTG
ACGGCTATCATCGGCATTGTTGTCACAAGCGCGGCAAGAGACATCTTGGGAGGCGAGCTTCAATGGAATCCTATT
TTCCTGCTGGCCAACATCCAGGAGCATTACAATTCGTCATCGGCAGCCCGCGCGGGGGTATTTTTCGCCAGCGCC
GGGCTTGTCTGCTCGCAGCTATCGATTTCGTTGGTCCTCAACGCGATGAGTTGCGGCATGGACTTGGCTGGTCTA
TGGCCCAAATACATCAACATCAGGCGCGGTGCATATGTCATGGCCATCGTGGGCATCGCGACACAACCGTGGCAG
CTTCTTGTGACGGCGGGCAAGTTCCTGACGGTTATGAGCGGTTTCGGCGTTTTCATGGCTCCGGCAACCGGCATT
TTGCTCGCCGATTATCACCTCGTCCGAAAACGTAGGCTCAATGTCGAGGATCTGTACACCGGAGACGCTTCTTCC
ATCTATTGGTTCTGCCAGGGGTTCAATTGGAGGGCATTCGCCGCCTTTTCTGCCGGCGTCTGGCCTCTCTTACCT
GGCCTAATCGGTGTTGTCAACAGAGACGAATCCGAAGCCTTGTCTGGCTGGATTCGGCTTTATAACCTAACTTTC
ATGGTTGGACTCTGTATTGCCTTCGTCGTCTTCTGGCTTCTGAATATCTTCATCCCTGTTCCAGGACTGGATGCG
GAAGTGCCGTTTTCTATCGAGAACGATAAAACCACACGAGATGGCTCGATGGACCACAAGGTTTCGAGTATCCAG
Transcript >Ophio5|7835
ATGGAGCTACAAAATAATAAGACGACTTTGGTGGCTCTCAATACAATAAATAAAACATGGGCTGATCTTAAACCG
ACTGCTTGTACAACGCATTCCGTGAGGAAAACAGTCGTACGAATCCTGCAGACTGAATCCCTCTCTCTCACCTCC
GGCGTGCTCGCATCTGCCGACAAATCTCTCATAGCTGGCAATATGGGTGCTGGCTGGAAAGCAGCACTCGACAGA
CTTCAGTGCCCAAAAGATGAAAATGCCAACTACGAGAACACGACTTGGTGCAACAGGGACTTGATTCCGACGCCG
GCCGAGAGACGGACTTTTGGCGTGTGGTCCTACCTGGGCTACTGGACCGTATCCGGGTCCAACGTCTCGGCATGG
CTGATCGGTAGCACTCTCCTCGCTTTCGGGTTGAGCCCTCAGCAAGCCATCGGCGCTGTTATTTTGGGAGGCTTG
TTGACTGGTCTGCTCGCCGTCGCTTGCGGATGGATGGGAGAAGTTCACCATATTGGTTTCACCGTCTGCAGCCGC
TTCTCCTGGGGGATGCGCGGCTCATACTTCCCGGTCGTTCTCCGAGTCTTTGTTGGCTGCATTTGGTTCGGCCTA
CAGGCGTTCTGGGGAGGACAGGCAATGAGAGTCGCCATTGGGGCTTTGATTCCTGGCCTGGCCCATCTTCCCAAC
CGATTCGACCCAAACTCTCACCTGCAGACGAATGACTTTGTTGGACTGGTTCTGTGGATGTGTCTGTTCATACCA
GGCGTCCTGATTCGGCCAGAGAAGTTGCAAATTGGCTTCTTCGTCTGCTTTGTTCTCTTCTGCGGCTCTTGTCTT
GGCCTGCTCATCTGGGCGGTCACCCGAGTCGGCGGACCCGGCAGCATGTTTCACGAGCCAAGCTCAGCGCCCAAT
GTCGGATGGGCATTCATGTTTGGCCTAACCTCAGTCCTTGGAGCCTGGGGAGGCGGCACTCTCGGACAGTCAGAC
TGGACGAGGTACGCCAGCCGGAGATATGCGCCAATTCTTTCTCAGCTGTTGGCGTCCCCCATCACAATCTCGGTG
ACGGCTATCATCGGCATTGTTGTCACAAGCGCGGCAAGAGACATCTTGGGAGGCGAGCTTCAATGGAATCCTATT
TTCCTGCTGGCCAACATCCAGGAGCATTACAATTCGTCATCGGCAGCCCGCGCGGGGGTATTTTTCGCCAGCGCC
GGGCTTGTCTGCTCGCAGCTATCGATTTCGTTGGTCCTCAACGCGATGAGTTGCGGCATGGACTTGGCTGGTCTA
TGGCCCAAATACATCAACATCAGGCGCGGTGCATATGTCATGGCCATCGTGGGCATCGCGACACAACCGTGGCAG
CTTCTTGTGACGGCGGGCAAGTTCCTGACGGTTATGAGCGGTTTCGGCGTTTTCATGGCTCCGGCAACCGGCATT
TTGCTCGCCGATTATCACCTCGTCCGAAAACGTAGGCTCAATGTCGAGGATCTGTACACCGGAGACGCTTCTTCC
ATCTATTGGTTCTGCCAGGGGTTCAATTGGAGGGCATTCGCCGCCTTTTCTGCCGGCGTCTGGCCTCTCTTACCT
GGCCTAATCGGTGTTGTCAACAGAGACGAATCCGAAGCCTTGTCTGGCTGGATTCGGCTTTATAACCTAACTTTC
ATGGTTGGACTCTGTATTGCCTTCGTCGTCTTCTGGCTTCTGAATATCTTCATCCCTGTTCCAGGACTGGATGCG
GAAGTGCCGTTTTCTATCGAGAACGATAAAACCACACGAGATGGCTCGATGGACCACAAGGTTTCGAGTATCCAG
TAG
Gene >Ophio5|7835
ATGGAGCTACAAAATAATAAGACGACTTTGGTGGCTCTCAATACAATAAATAAAACATGGGCTGATCTTAAACCG
ACTGCTTGTACAACGCATTCCGTGAGGAAAACAGTGTAAGTTCAGCCAACAAGGCATTCAATACCAACTCTATTC
AAAAAGGCGCGGTTGCAGAGACTTGTCATCAGCTGACCACCCTCTCTACACGTGTAGCGTACGAATCCTGCAGGT
AGGTAAGCACTTAACCGTGTGCAATATTCACGTAAAAGCCTATGACGCTAAGACTGAATCCCTCTCTCTCACCTC
CGGCGTGCTCGCATCTGCCGACAAATCTCTCATAGCTGGCAATATGGGTGCTGGCTGGAAAGCAGCACTCGACAG
ACTTCAGTGGTTTGTCGTCTATAATCGATTATGTGGCGTCGCTCAACGACCATGATGCTAACGCACGTCTAGCCC
AAAAGATGAAAATGCCAACTACGAGAACACGACTTGGTGCAACAGGGACTTGATTCCGACGCCGGCCGAGAGACG
GACTTTTGGCGTGTGGTCCTACCTGGGTATCGTGCCTTCCGGCTCCTCGCTGTTCGTCTCCCGTGGCCCATTGAA
GCTGACCGTCATGGCGCTCAAGGCTACTGGACCGTATCCGGGTCCAACGTCTCGGCATGGCTGATCGGTAGCACT
CTCCTCGCTTTCGGGTTGAGCCCTCAGCAAGCCATCGGCGCTGTTGTACGTTTCCGAGGTTCGGAAACAGGGGAA
AGGGAATTGACGGCATGTGCTAGATTTTGGGAGGCTTGTTGACTGGTCTGCTCGCCGTCGCTTGCGGATGGATGG
GAGAAGTTCACCATATTGGTTTCACCGTCTGCAGCCGCTTCTCCTGGGGGATGCGCGGCTCATACTGTGAGTACT
GTCGTCATCTCTCTTCCGCGGAGCTGACGGCGGACCCAAAGTCCCGGTCGTTCTCCGAGTCTTTGTTGGCTGCAT
TTGGTTCGGCCTACAGGCGTTCTGGGGAGGACAGGCAATGAGAGTCGCCATTGGGGCTTTGATTCCTGGTAGGTT
CGCCCTGGAGCCTCCGTCGTGGTTTCAGTTCGCATTGACAAGCTCTAGGCCTGGCCCATCTTCCCAACCGATTCG
ACCCAAACTCTCACCTGCAGACGAATGACTTTGTTGGACTGGTTCTGTGGATGTGTCTGTTCATACCAGGCGTCC
TGATTCGGCCAGAGAAGTTGCAAATTGGCTTCTTCGTCTGCTTTGTTCTCTTCTGCGGCTCTTGTCTTGGCCTGC
TCATCTGGTAAGTCTTGGCAAAAAGCGGTGAGGGGCCTGTAGAATGGCTTGGCTAAATGCCTGCCTCAAGGGCGG
TCACCCGAGTCGGCGGACCCGGCAGCATGTTTCACGAGCCAAGCTCAGCGCCCAATGTCGGATGGGCATTCATGT
TTGGCCTAACCTCAGTCCTTGGAGCCTGGGGAGGCGGCACTCTCGGACAGTCAGACTGGACGAGGTACGCCAGCC
GGAGATATGCGCCAATTCTTTCTCAGCTGTTGGCGTCCCCCATCACAATCTCGGTGACGGCTATCATCGGCATTG
TTGTCACAAGCGCGGCAAGAGACATCTTGGGAGGCGAGCTTCAATGGAATCCTATTTTCCTGCTGGCCAACATCC
AGGAGCATTACAATTCGTCATCGGCAGCCCGCGCGGGGGTATTTTTCGCCAGCGCCGGGCTTGTCTGCTCGCAGC
TATCGGTAAGAGGGAAATTAAATCAATGGAAAGTACGCGTTCTCTTAAAGCTCATTGTGATTCCAGATTTCGTTG
GTCCTCAACGCGATGAGTTGCGGCATGGACTTGGCTGGTCTATGGCCCAAATACATCAACATCAGGCGCGGTGCA
TATGTCATGGCCATCGTGGGCATCGCGACACAGTAAGTCACTTGTTATTCCGCGAATAGCGGCTGTCGACTCAAA
AGCGCTGCAGACCGTGGCAGCTTCTTGTGACGGCGGGCAAGTTCCTGACGGTTATGAGCGGTTTCGGCGTTTTCA
TGGCTCCGGCAACGTAAGTGCTATCGCTTTATCCTGACAGGGTCACCTTGGCTAAAATCGTGATAAAAAAGCGGC
ATTTTGCTCGCCGATTATCACCTCGTCCGAAAACGTAGGCTCAATGTCGAGGATCTGTACACCGGAGACGCTTCT
TCCATCTATTGGTTCTGCCAGGGGTTCAATTGGAGGGCATTCGCCGCCTTTTCTGCCGGCGTCTGGCCTCTCTTA
CGTACGCATTGTCCCGTTGTGAGGTGCGGCAAAGGTACTTGGTTGCTAACGACAGGCTCTATCTAGCTGGCCTAA
TCGGTGTTGTCAACAGAGACGAATCCGAAGCCTTGTCTGGCTGGATTCGGCTTTATAACCTAACTTTCATGGTTG
GACTCTGTATTGCCTTCGTCGTCTTCTGGCTTCTGAATATCTTCATCCCTGTTCCAGGACTGGATGCGGAAGTGC
CGTTTTCTATCGAGAACGATAAAACCACACGAGATGGCTCGATGGACCACAAGGTTTCGAGTATCCAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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