© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|7823 |
| Gene name | |
| Location | scaffold_8:75030..76203 |
| Strand | - |
| Gene length (bp) | 1173 |
| Transcript length (bp) | 1062 |
| Coding sequence length (bp) | 1059 |
| Protein length (aa) | 353 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03820 | SFXNs | Sideroflexins | 2.6E-125 | 11 | 353 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13793|FSF1_SCHPO | Probable mitochondrial transport protein fsf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fsf1 PE=3 SV=2 | 8 | 353 | 3.0E-121 |
| sp|Q12029|FSF1_YEAST | Probable mitochondrial transport protein FSF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FSF1 PE=1 SV=1 | 1 | 353 | 3.0E-114 |
| sp|Q54NQ9|SFXN_DICDI | Sideroflexin OS=Dictyostelium discoideum GN=sfxn PE=3 SV=1 | 8 | 353 | 7.0E-71 |
| sp|Q925N0|SFXN5_MOUSE | Sideroflexin-5 OS=Mus musculus GN=Sfxn5 PE=1 SV=2 | 15 | 353 | 1.0E-60 |
| sp|Q8CFD0|SFXN5_RAT | Sideroflexin-5 OS=Rattus norvegicus GN=Sfxn5 PE=2 SV=1 | 15 | 353 | 1.0E-60 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13793|FSF1_SCHPO | Probable mitochondrial transport protein fsf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fsf1 PE=3 SV=2 | 8 | 353 | 3.0E-121 |
| sp|Q12029|FSF1_YEAST | Probable mitochondrial transport protein FSF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FSF1 PE=1 SV=1 | 1 | 353 | 3.0E-114 |
| sp|Q54NQ9|SFXN_DICDI | Sideroflexin OS=Dictyostelium discoideum GN=sfxn PE=3 SV=1 | 8 | 353 | 7.0E-71 |
| sp|Q925N0|SFXN5_MOUSE | Sideroflexin-5 OS=Mus musculus GN=Sfxn5 PE=1 SV=2 | 15 | 353 | 1.0E-60 |
| sp|Q8CFD0|SFXN5_RAT | Sideroflexin-5 OS=Rattus norvegicus GN=Sfxn5 PE=2 SV=1 | 15 | 353 | 1.0E-60 |
| sp|Q8TD22|SFXN5_HUMAN | Sideroflexin-5 OS=Homo sapiens GN=SFXN5 PE=1 SV=1 | 15 | 353 | 4.0E-60 |
| sp|B2LU20|SFXN1_SHEEP | Sideroflexin-1 OS=Ovis aries GN=SFXN1 PE=2 SV=1 | 1 | 353 | 2.0E-52 |
| sp|Q5E9M8|SFXN1_BOVIN | Sideroflexin-1 OS=Bos taurus GN=SFXN1 PE=2 SV=3 | 1 | 353 | 5.0E-51 |
| sp|Q9H9B4|SFXN1_HUMAN | Sideroflexin-1 OS=Homo sapiens GN=SFXN1 PE=1 SV=4 | 1 | 353 | 1.0E-50 |
| sp|A5A761|SFXN1_PIG | Sideroflexin-1 OS=Sus scrofa GN=SFXN1 PE=2 SV=1 | 1 | 353 | 3.0E-50 |
| sp|Q5RD16|SFXN3_PONAB | Sideroflexin-3 OS=Pongo abelii GN=SFXN3 PE=2 SV=1 | 4 | 353 | 5.0E-50 |
| sp|Q9BWM7|SFXN3_HUMAN | Sideroflexin-3 OS=Homo sapiens GN=SFXN3 PE=1 SV=2 | 4 | 353 | 2.0E-49 |
| sp|Q9JHY2|SFXN3_RAT | Sideroflexin-3 OS=Rattus norvegicus GN=Sfxn3 PE=2 SV=1 | 4 | 353 | 8.0E-49 |
| sp|Q99JR1|SFXN1_MOUSE | Sideroflexin-1 OS=Mus musculus GN=Sfxn1 PE=1 SV=3 | 1 | 353 | 1.0E-48 |
| sp|A6QP55|SFXN3_BOVIN | Sideroflexin-3 OS=Bos taurus GN=SFXN3 PE=2 SV=1 | 4 | 353 | 1.0E-48 |
| sp|Q91V61|SFXN3_MOUSE | Sideroflexin-3 OS=Mus musculus GN=Sfxn3 PE=1 SV=1 | 4 | 353 | 2.0E-48 |
| sp|Q63965|SFXN1_RAT | Sideroflexin-1 OS=Rattus norvegicus GN=Sfxn1 PE=2 SV=4 | 1 | 353 | 8.0E-48 |
| sp|Q5FC79|SFXN5_CAEEL | Sideroflexin-5 OS=Caenorhabditis elegans GN=sfxn-5 PE=3 SV=1 | 15 | 353 | 6.0E-45 |
| sp|Q09201|SFXN1_CAEEL | Putative sideroflexin-1.1 OS=Caenorhabditis elegans GN=sfxn-1.1 PE=3 SV=1 | 15 | 353 | 3.0E-42 |
| sp|Q925N2|SFXN2_MOUSE | Sideroflexin-2 OS=Mus musculus GN=Sfxn2 PE=1 SV=1 | 15 | 353 | 1.0E-34 |
| sp|Q96NB2|SFXN2_HUMAN | Sideroflexin-2 OS=Homo sapiens GN=SFXN2 PE=1 SV=2 | 15 | 353 | 4.0E-34 |
| sp|Q5EA43|SFXN2_BOVIN | Sideroflexin-2 OS=Bos taurus GN=SFXN2 PE=2 SV=2 | 15 | 353 | 4.0E-34 |
| sp|A8E7G5|SFXN4_DANRE | Sideroflexin-4 OS=Danio rerio GN=sfxn4 PE=2 SV=1 | 15 | 353 | 3.0E-12 |
| sp|Q3T0M2|SFXN4_BOVIN | Sideroflexin-4 OS=Bos taurus GN=SFXN4 PE=2 SV=1 | 20 | 353 | 2.0E-09 |
| sp|Q925N1|SFXN4_MOUSE | Sideroflexin-4 OS=Mus musculus GN=Sfxn4 PE=2 SV=2 | 20 | 353 | 1.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006811 | ion transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0015075 | ion transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 42 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 300 | 322 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|7823 MSSSLPGSRELPVSQYDLSSYWGRVRHAVGITDPSTLFAGKAGLEKAKRLVTDYKTGRTQYMTPELWQAKKIVDS TLHPDTGEPVFLPLRMSCFVITNLIVTAGMLQPGLQTAGTVAWQVANQSVNVAVNSANANKSSPMTTTMLAKSYV FAVTASCSVALGLNRLVPRLRVSAGTRNVLGRLVPFAAVASAGALNAYLMRRGEIQTGIDVRPVLSSEEKKRLQE QGKSERDVPSLGKSRKAAKLAVYETAASRVFNSSPVMVLPPMVLYYMQHKQAWYKRLMERNWVKARPRMAATIPI GINLGLIAATAFAVLPLALAVFPQQQQISADRLEDEFHGRGGSDGKVWFNRGL |
| Coding | >Ophio5|7823 ATGTCGTCGTCGCTACCGGGCTCGCGCGAGCTGCCTGTTTCGCAATATGACTTGAGCAGCTACTGGGGCCGGGTG CGGCACGCGGTCGGCATCACCGATCCAAGCACCCTCTTTGCTGGCAAGGCCGGGCTCGAAAAGGCAAAGAGGCTC GTCACTGACTACAAGACGGGAAGGACGCAATACATGACGCCGGAGCTGTGGCAGGCCAAGAAAATTGTCGACTCG ACGCTCCATCCAGACACGGGCGAACCCGTCTTTCTGCCTCTTCGCATGTCCTGTTTTGTCATCACCAACCTCATC GTGACGGCGGGCATGCTGCAGCCCGGGTTGCAGACGGCCGGCACGGTGGCTTGGCAGGTGGCCAACCAATCGGTC AACGTGGCCGTCAATAGCGCAAACGCCAACAAGTCGTCGCCCATGACGACGACGATGCTGGCCAAGTCCTACGTA TTCGCCGTCACGGCCTCGTGCTCCGTCGCTCTCGGCCTGAACCGGCTTGTGCCCCGGCTGCGGGTCTCGGCCGGC ACTCGCAACGTCCTCGGCCGGCTCGTGCCCTTTGCCGCCGTTGCCTCAGCCGGCGCGCTCAACGCCTATCTGATG CGTCGCGGCGAGATTCAGACGGGCATCGACGTTCGACCGGTGCTCTCATCCGAGGAGAAGAAACGGCTGCAGGAG CAGGGCAAGTCAGAGCGAGACGTGCCGTCGCTGGGCAAGAGCCGCAAGGCGGCCAAGCTGGCCGTGTATGAGACG GCAGCCAGCCGAGTCTTCAATAGCAGCCCCGTCATGGTGCTGCCGCCCATGGTGCTCTACTACATGCAGCACAAG CAGGCCTGGTACAAGAGGCTGATGGAGAGGAACTGGGTCAAGGCCAGGCCCAGGATGGCGGCGACAATTCCCATT GGCATCAACCTCGGGCTGATTGCGGCGACTGCGTTTGCTGTACTGCCGCTGGCGCTTGCTGTCTTCCCGCAGCAG CAGCAGATATCGGCCGACAGGCTCGAGGACGAGTTCCATGGCCGAGGCGGCAGCGACGGCAAGGTGTGGTTTAAT CGCGGCCTC |
| Transcript | >Ophio5|7823 ATGTCGTCGTCGCTACCGGGCTCGCGCGAGCTGCCTGTTTCGCAATATGACTTGAGCAGCTACTGGGGCCGGGTG CGGCACGCGGTCGGCATCACCGATCCAAGCACCCTCTTTGCTGGCAAGGCCGGGCTCGAAAAGGCAAAGAGGCTC GTCACTGACTACAAGACGGGAAGGACGCAATACATGACGCCGGAGCTGTGGCAGGCCAAGAAAATTGTCGACTCG ACGCTCCATCCAGACACGGGCGAACCCGTCTTTCTGCCTCTTCGCATGTCCTGTTTTGTCATCACCAACCTCATC GTGACGGCGGGCATGCTGCAGCCCGGGTTGCAGACGGCCGGCACGGTGGCTTGGCAGGTGGCCAACCAATCGGTC AACGTGGCCGTCAATAGCGCAAACGCCAACAAGTCGTCGCCCATGACGACGACGATGCTGGCCAAGTCCTACGTA TTCGCCGTCACGGCCTCGTGCTCCGTCGCTCTCGGCCTGAACCGGCTTGTGCCCCGGCTGCGGGTCTCGGCCGGC ACTCGCAACGTCCTCGGCCGGCTCGTGCCCTTTGCCGCCGTTGCCTCAGCCGGCGCGCTCAACGCCTATCTGATG CGTCGCGGCGAGATTCAGACGGGCATCGACGTTCGACCGGTGCTCTCATCCGAGGAGAAGAAACGGCTGCAGGAG CAGGGCAAGTCAGAGCGAGACGTGCCGTCGCTGGGCAAGAGCCGCAAGGCGGCCAAGCTGGCCGTGTATGAGACG GCAGCCAGCCGAGTCTTCAATAGCAGCCCCGTCATGGTGCTGCCGCCCATGGTGCTCTACTACATGCAGCACAAG CAGGCCTGGTACAAGAGGCTGATGGAGAGGAACTGGGTCAAGGCCAGGCCCAGGATGGCGGCGACAATTCCCATT GGCATCAACCTCGGGCTGATTGCGGCGACTGCGTTTGCTGTACTGCCGCTGGCGCTTGCTGTCTTCCCGCAGCAG CAGCAGATATCGGCCGACAGGCTCGAGGACGAGTTCCATGGCCGAGGCGGCAGCGACGGCAAGGTGTGGTTTAAT CGCGGCCTCTAA |
| Gene | >Ophio5|7823 ATGTCGTCGTCGCTACCGGGCTCGCGCGAGCTGCCTGTTTCGCAATATGACTTGAGCAGCTACTGGGGCCGGGTG CGGCACGCGGTCGGCATCACCGATCCAAGGTGAGCTTCGCCAGCCGAAGCTCGACGGCGGCGCTGACTTGGGGCT CGTCTAGCACCCTCTTTGCTGGCAAGGCCGGGCTCGAAAAGGCAAAGAGGCTCGTCACTGACTACAAGACGGGAA GGACGCAATACATGACGCCGGAGCTGTGGCAGGCCAAGAAAATTGTCGACTCGACGCTCCATCCAGGTTTGCTCT TCCCTTGGGACTGTCGAGCGGGCGGCCAGCTGAAGACATTGGTTACCAGACACGGGCGAACCCGTCTTTCTGCCT CTTCGCATGTCCTGTTTTGTCATCACCAACCTCATCGTGACGGCGGGCATGCTGCAGCCCGGGTTGCAGACGGCC GGCACGGTGGCTTGGCAGGTGGCCAACCAATCGGTCAACGTGGCCGTCAATAGCGCAAACGCCAACAAGTCGTCG CCCATGACGACGACGATGCTGGCCAAGTCCTACGTATTCGCCGTCACGGCCTCGTGCTCCGTCGCTCTCGGCCTG AACCGGCTTGTGCCCCGGCTGCGGGTCTCGGCCGGCACTCGCAACGTCCTCGGCCGGCTCGTGCCCTTTGCCGCC GTTGCCTCAGCCGGCGCGCTCAACGCCTATCTGATGCGTCGCGGCGAGATTCAGACGGGCATCGACGTTCGACCG GTGCTCTCATCCGAGGAGAAGAAACGGCTGCAGGAGCAGGGCAAGTCAGAGCGAGACGTGCCGTCGCTGGGCAAG AGCCGCAAGGCGGCCAAGCTGGCCGTGTATGAGACGGCAGCCAGCCGAGTCTTCAATAGCAGCCCCGTCATGGTG CTGCCGCCCATGGTGCTCTACTACATGCAGCACAAGCAGGCCTGGTACAAGAGGCTGATGGAGAGGAACTGGGTC AAGGCCAGGCCCAGGATGGCGGCGACAATTCCCATTGGCATCAACCTCGGGCTGATTGCGGCGACTGCGTTTGCT GTACTGCCGCTGGCGCTTGCTGTCTTCCCGCAGCAGCAGCAGATATCGGCCGACAGGCTCGAGGACGAGTTCCAT GGCCGAGGCGGCAGCGACGGCAAGGTGTGGTTTAATCGCGGCCTCTAA |