Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7812
Gene name
Locationscaffold_8:46638..47344
Strand+
Gene length (bp)706
Transcript length (bp)633
Coding sequence length (bp)630
Protein length (aa) 210

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20238 DUF6595 Family of unknown function (DUF6595) 2.9E-28 14 151

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q4WCX9|YA280_ASPFU Uncharacterized protein AFUA_6G02800 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=AFUA_6G02800 PE=1 SV=1 12 155 1.0E-12

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7812
MLLIAVSLWLGLVAAHFQVLYPKSIGFSDESEDKEPCGGFTPDSSTKKVDFHVGGDALAMRLTHQQGNWLFRATT
DETARSGWKQIFPIVQQSGLGDFCEPSVTAPEDFAGKKGVVSVVSSAVDGLLYQCIAVNFVDGSAKDRPSECRNA
SSVQASFTSDNKLSALTGDASWSPSPTSSSAAASTSSGAAQPLSWNRAAVAVAAVLGLMA
Coding >Ophio5|7812
ATGCTCCTCATCGCCGTCAGTCTCTGGCTCGGCCTCGTCGCCGCCCACTTCCAGGTCCTGTACCCGAAATCAATC
GGCTTCTCGGACGAAAGCGAAGACAAGGAACCCTGCGGCGGCTTCACGCCCGACTCTTCCACGAAAAAGGTGGAT
TTTCACGTCGGCGGCGATGCACTGGCGATGCGCTTGACGCATCAGCAAGGCAATTGGCTCTTCCGCGCGACTACG
GACGAGACGGCACGCTCCGGCTGGAAGCAGATTTTTCCCATCGTTCAGCAGAGCGGGCTCGGAGACTTTTGCGAG
CCGAGTGTCACGGCGCCAGAGGACTTTGCGGGGAAAAAGGGAGTTGTTAGCGTTGTGTCGTCGGCCGTGGACGGG
TTGCTGTATCAGTGCATCGCCGTCAACTTCGTCGACGGTTCCGCCAAGGATCGTCCGTCGGAGTGCCGAAATGCC
TCGTCCGTCCAGGCCTCGTTCACGTCCGACAATAAGCTGTCAGCGCTGACGGGAGACGCATCTTGGTCACCGTCG
CCCACGTCGTCTTCTGCCGCGGCTTCGACCAGTTCGGGCGCTGCACAGCCCCTGTCGTGGAATAGGGCTGCCGTT
GCTGTCGCTGCTGTGCTGGGTTTGATGGCG
Transcript >Ophio5|7812
ATGCTCCTCATCGCCGTCAGTCTCTGGCTCGGCCTCGTCGCCGCCCACTTCCAGGTCCTGTACCCGAAATCAATC
GGCTTCTCGGACGAAAGCGAAGACAAGGAACCCTGCGGCGGCTTCACGCCCGACTCTTCCACGAAAAAGGTGGAT
TTTCACGTCGGCGGCGATGCACTGGCGATGCGCTTGACGCATCAGCAAGGCAATTGGCTCTTCCGCGCGACTACG
GACGAGACGGCACGCTCCGGCTGGAAGCAGATTTTTCCCATCGTTCAGCAGAGCGGGCTCGGAGACTTTTGCGAG
CCGAGTGTCACGGCGCCAGAGGACTTTGCGGGGAAAAAGGGAGTTGTTAGCGTTGTGTCGTCGGCCGTGGACGGG
TTGCTGTATCAGTGCATCGCCGTCAACTTCGTCGACGGTTCCGCCAAGGATCGTCCGTCGGAGTGCCGAAATGCC
TCGTCCGTCCAGGCCTCGTTCACGTCCGACAATAAGCTGTCAGCGCTGACGGGAGACGCATCTTGGTCACCGTCG
CCCACGTCGTCTTCTGCCGCGGCTTCGACCAGTTCGGGCGCTGCACAGCCCCTGTCGTGGAATAGGGCTGCCGTT
GCTGTCGCTGCTGTGCTGGGTTTGATGGCGTGA
Gene >Ophio5|7812
ATGCTCCTCATCGCCGTCAGTCTCTGGCTCGGCCTCGTCGCCGCCCACTTCCAGGTCCTGTACCCGAAATCAATC
GGCTTCTCGGACGAAAGCGAAGACAAGGAACCCTGCGGCGGCTTCACGCCCGACTCTTCCACGAAAAAGGTGGAT
TTTCACGTCGGCGGCGATGCACTGGCGATGCGCTTGACGCATCAGCAAGGCAATTGGCTCTTCCGCGCGACTACG
GACGAGACGGCACGCTCCGGCTGGAAGCAGATTTTTCCCATCGTTCAGCAGAGCGGGCTCGGAGACTTTTGCGAG
CCGAGTGTCACGGCGCCAGAGGACTTTGCGGGGAAAAAGGGAGTTGTTAGCGTTGTGTCGTCGGCCGTGGACGGG
TTGCTGTATCAGGTGAGGGGAGACGTGAACCGACCGAGACAGAGGCAGAGAGACGAAAGGCTAATTAATCATGGG
CATCTACCAGTGCATCGCCGTCAACTTCGTCGACGGTTCCGCCAAGGATCGTCCGTCGGAGTGCCGAAATGCCTC
GTCCGTCCAGGCCTCGTTCACGTCCGACAATAAGCTGTCAGCGCTGACGGGAGACGCATCTTGGTCACCGTCGCC
CACGTCGTCTTCTGCCGCGGCTTCGACCAGTTCGGGCGCTGCACAGCCCCTGTCGTGGAATAGGGCTGCCGTTGC
TGTCGCTGCTGTGCTGGGTTTGATGGCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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