Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|780
Gene name
Location	scaffold_1212:42..1445
Strand	-
Gene length (bp)	1403
Transcript length (bp)	1185
Coding sequence length (bp)	1182
Protein length (aa)	394

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13641	Glyco_tranf_2_3	Glycosyltransferase like family 2	4.3E-25	75	317
PF00535	Glycos_transf_2	Glycosyl transferase family 2	3.6E-05	77	251

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
SC16a	Pure fungal culture	27.25	12.89	41.61
CcL	In ants, during behavior modification	93.61	42.98	144.24
CcD	In ants, recently dead	75.53	40.67	110.39

Differential expression

Label1	Label2	Q-value	Significant difference
SC16a	CcL	0.000286	yes
SC16a	CcD	0.000286	yes
CcL	CcD	0.419074	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|780 MNDAAIGQLLAGIAGRAIVRLIHSPRHGSSPIVWAIVFWILWIHRYLRLLVHCVSHWTYKSKPIPDNPSYTSKDV TVVLPTIHNVFEELRPSIESILICDPEELILVTTDPKRVELEKLAASLRVDDGNKTRCNRVRVFSTPIANKRLQV REALPHVNTAITVMVDDDVTWPSTMIPWILAPFEDKDMGGVGTCQRAKRDRSGSWAASMWNWLGQAYIERRNFEI SATHNIDGGTSCMSGRTGAYRSEILKSHDFLDGFINEKWRRWILNADDDNFVTRWLVSHKHKTWIQYGPECELET TLENNRKFLYQCTRWARSNWRSNWTSLVQERHVWRQQPWCTYALHIATFTSLAFVVDPLLLISYGEAGRALEAPP HRHHLPARVHYLWLLPRPH
Coding	>Ophio5\|780 ATGAACGACGCCGCCATCGGCCAGCTGTTGGCCGGGATTGCGGGCCGCGCCATTGTGCGCCTGATTCACTCTCCC CGTCACGGCTCCTCCCCTATCGTGTGGGCCATTGTCTTCTGGATCCTATGGATACATCGTTACCTTCGCCTGCTC GTCCATTGCGTCAGCCACTGGACCTACAAATCGAAGCCGATCCCGGATAACCCGAGCTATACTTCCAAGGACGTC ACCGTTGTCCTCCCGACCATCCACAATGTCTTTGAAGAGCTGCGACCGTCGATCGAGAGCATCCTTATATGCGAC CCGGAAGAGCTGATTCTCGTCACGACGGACCCCAAGCGCGTCGAACTGGAGAAGCTGGCGGCCTCGCTCAGGGTC GACGACGGCAATAAGACGAGATGTAACAGGGTCCGTGTCTTCAGCACGCCCATCGCCAACAAGCGGCTCCAGGTG CGCGAGGCTCTTCCGCATGTCAACACGGCCATCACCGTCATGGTCGACGACGACGTCACCTGGCCCTCGACCATG ATCCCCTGGATTCTGGCCCCTTTCGAAGACAAGGACATGGGCGGCGTCGGCACCTGTCAACGCGCCAAACGCGAC CGGTCCGGCTCCTGGGCCGCCAGCATGTGGAACTGGCTCGGCCAAGCCTACATCGAGCGGCGCAACTTTGAGATA TCGGCTACGCACAACATCGACGGCGGCACCTCGTGTATGTCCGGTCGGACGGGCGCCTACCGGTCCGAGATTCTC AAGAGCCACGACTTCCTCGACGGCTTCATCAACGAGAAGTGGCGTCGCTGGATCCTCAATGCCGACGACGACAAC TTCGTCACCCGTTGGCTGGTCTCTCACAAGCACAAGACGTGGATTCAGTACGGGCCCGAGTGCGAGCTCGAGACG ACGCTCGAGAACAACCGAAAGTTCCTCTATCAATGCACGCGCTGGGCCCGCAGCAACTGGCGTAGCAACTGGACC AGCCTCGTCCAGGAGCGGCACGTCTGGAGACAGCAGCCTTGGTGCACGTACGCGCTTCACATTGCCACCTTTACC TCGCTCGCCTTCGTCGTCGACCCCCTGCTCCTGATATCGTACGGTGAAGCTGGTCGGGCTCTGGAGGCGCCACCC CATCGACATCATCTTCCTGCCCGTGTCCATTATCTTTGGCTACTTCCACGGCCTCAT
Transcript	>Ophio5\|780 ATGAACGACGCCGCCATCGGCCAGCTGTTGGCCGGGATTGCGGGCCGCGCCATTGTGCGCCTGATTCACTCTCCC CGTCACGGCTCCTCCCCTATCGTGTGGGCCATTGTCTTCTGGATCCTATGGATACATCGTTACCTTCGCCTGCTC GTCCATTGCGTCAGCCACTGGACCTACAAATCGAAGCCGATCCCGGATAACCCGAGCTATACTTCCAAGGACGTC ACCGTTGTCCTCCCGACCATCCACAATGTCTTTGAAGAGCTGCGACCGTCGATCGAGAGCATCCTTATATGCGAC CCGGAAGAGCTGATTCTCGTCACGACGGACCCCAAGCGCGTCGAACTGGAGAAGCTGGCGGCCTCGCTCAGGGTC GACGACGGCAATAAGACGAGATGTAACAGGGTCCGTGTCTTCAGCACGCCCATCGCCAACAAGCGGCTCCAGGTG CGCGAGGCTCTTCCGCATGTCAACACGGCCATCACCGTCATGGTCGACGACGACGTCACCTGGCCCTCGACCATG ATCCCCTGGATTCTGGCCCCTTTCGAAGACAAGGACATGGGCGGCGTCGGCACCTGTCAACGCGCCAAACGCGAC CGGTCCGGCTCCTGGGCCGCCAGCATGTGGAACTGGCTCGGCCAAGCCTACATCGAGCGGCGCAACTTTGAGATA TCGGCTACGCACAACATCGACGGCGGCACCTCGTGTATGTCCGGTCGGACGGGCGCCTACCGGTCCGAGATTCTC AAGAGCCACGACTTCCTCGACGGCTTCATCAACGAGAAGTGGCGTCGCTGGATCCTCAATGCCGACGACGACAAC TTCGTCACCCGTTGGCTGGTCTCTCACAAGCACAAGACGTGGATTCAGTACGGGCCCGAGTGCGAGCTCGAGACG ACGCTCGAGAACAACCGAAAGTTCCTCTATCAATGCACGCGCTGGGCCCGCAGCAACTGGCGTAGCAACTGGACC AGCCTCGTCCAGGAGCGGCACGTCTGGAGACAGCAGCCTTGGTGCACGTACGCGCTTCACATTGCCACCTTTACC TCGCTCGCCTTCGTCGTCGACCCCCTGCTCCTGATATCGTACGGTGAAGCTGGTCGGGCTCTGGAGGCGCCACCC CATCGACATCATCTTCCTGCCCGTGTCCATTATCTTTGGCTACTTCCACGGCCTCATTAA
Gene	>Ophio5\|780 ATGAACGACGCCGCCATCGGCCAGCTGTTGGCCGGGATTGCGGGCCGCGCCATTGTGCGCCTGATTCACTCTCCC CGTCACGGCTCCTCCCCTATCGTGTGGGCCATTGTCTTCTGGATCCTATGGTAACGTTGGCTACCCCCCGACCGA GGTCTCGGCGGATATTGACCTTTGAGGGGCACAGGATACATCGTTACCTTCGCCTGCTCGTCCATTGCGTCAGCC ACTGGACCTACAAATCGAAGCCGATCCCGGATAACCCGAGCTATACTTCCAAGGACGTCACCGTTGTCCTCCCGA CCATCCACAATGTCTTTGAAGAGCTGCGACCGTCGATCGAGAGCATCCTTATATGCGACCCGGAAGAGCTGATTC TCGTCACGACGGACCCCAAGCGCGTCGAACTGGAGAAGCTGGCGGCCTCGCTCAGGGTCGACGACGGCAATAAGA CGAGATGTAACAGGGTCCGTGTCTTCAGCACGCCCATCGCCAACAAGCGGCTCCAGGTGCGCGAGGCTCTTCCGC ATGTCAACACGGCCATCACCGTCATGGTCGACGACGACGTCACCTGGCCCTCGACCATGATCCCCTGGATTCTGG CCCCTTTCGAAGACAAGGACATGGGCGGCGTCGGCACCTGTCAACGCGCCAAACGCGACCGGTCCGGCTCCTGGG CCGCCAGCATGTGGAACTGGCTCGGCCAAGCCTACATCGAGCGGCGCAACTTTGAGATATCGGCTACGCACAACA TCGACGGCGGCACCTCGTGTATGTCCGGTCGGACGGGCGCCTACCGGTCCGAGATTCTCAAGAGCCACGACTTCC TCGACGGCTTCATCAACGAGAAGTGGCGTCGCTGGATCCTCAATGCCGACGACGACAACTTCGTCACCCGTTGGC TGGTCTCTCACAAGCACAAGACGTGGATTCAGTACGGGCCCGAGTGCGAGCTCGAGACGACGCTCGAGAACAACC GAAAGTTCCTCTATCAATGCACGCGCTGGGCCCGCAGCAACTGGCGTAGCAACTGGACCAGCCTCGTCCAGGAGC GGCACGTCTGGAGGTAAGGAGGAGACGAGCGAATGACATACTTGGCAGAATGACTGCTGATCCCGAGAGCTCTTC TCTTGGTATAGACAGCAGCCTTGGTGCACGTACGCGCTTCACATTGCCACCTTTACCTCGCTCGCCTTCGTCGTC GACCCCCTGCTCCTGATATCGTGTTGGTTGGCCACGTCCGAGTGGGACCTGTATCAGCGCCAATGGGCCTTTTGG ACCCTGTTCGTCTTCATCTTCGCCTTCACCAAGACGGTGAAGCTGGTCGGGCTCTGGAGGCGCCACCCCATCGAC ATCATCTTCCTGCCCGTGTCCATTATCTTTGGCTACTTCCACGGCCTCATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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