Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|780
Gene name
Locationscaffold_1212:42..1445
Strand-
Gene length (bp)1403
Transcript length (bp)1185
Coding sequence length (bp)1182
Protein length (aa) 394

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13641 Glyco_tranf_2_3 Glycosyltransferase like family 2 4.3E-25 75 317
PF00535 Glycos_transf_2 Glycosyl transferase family 2 3.6E-05 77 251

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|780
MNDAAIGQLLAGIAGRAIVRLIHSPRHGSSPIVWAIVFWILWIHRYLRLLVHCVSHWTYKSKPIPDNPSYTSKDV
TVVLPTIHNVFEELRPSIESILICDPEELILVTTDPKRVELEKLAASLRVDDGNKTRCNRVRVFSTPIANKRLQV
REALPHVNTAITVMVDDDVTWPSTMIPWILAPFEDKDMGGVGTCQRAKRDRSGSWAASMWNWLGQAYIERRNFEI
SATHNIDGGTSCMSGRTGAYRSEILKSHDFLDGFINEKWRRWILNADDDNFVTRWLVSHKHKTWIQYGPECELET
TLENNRKFLYQCTRWARSNWRSNWTSLVQERHVWRQQPWCTYALHIATFTSLAFVVDPLLLISYGEAGRALEAPP
HRHHLPARVHYLWLLPRPH
Coding >Ophio5|780
ATGAACGACGCCGCCATCGGCCAGCTGTTGGCCGGGATTGCGGGCCGCGCCATTGTGCGCCTGATTCACTCTCCC
CGTCACGGCTCCTCCCCTATCGTGTGGGCCATTGTCTTCTGGATCCTATGGATACATCGTTACCTTCGCCTGCTC
GTCCATTGCGTCAGCCACTGGACCTACAAATCGAAGCCGATCCCGGATAACCCGAGCTATACTTCCAAGGACGTC
ACCGTTGTCCTCCCGACCATCCACAATGTCTTTGAAGAGCTGCGACCGTCGATCGAGAGCATCCTTATATGCGAC
CCGGAAGAGCTGATTCTCGTCACGACGGACCCCAAGCGCGTCGAACTGGAGAAGCTGGCGGCCTCGCTCAGGGTC
GACGACGGCAATAAGACGAGATGTAACAGGGTCCGTGTCTTCAGCACGCCCATCGCCAACAAGCGGCTCCAGGTG
CGCGAGGCTCTTCCGCATGTCAACACGGCCATCACCGTCATGGTCGACGACGACGTCACCTGGCCCTCGACCATG
ATCCCCTGGATTCTGGCCCCTTTCGAAGACAAGGACATGGGCGGCGTCGGCACCTGTCAACGCGCCAAACGCGAC
CGGTCCGGCTCCTGGGCCGCCAGCATGTGGAACTGGCTCGGCCAAGCCTACATCGAGCGGCGCAACTTTGAGATA
TCGGCTACGCACAACATCGACGGCGGCACCTCGTGTATGTCCGGTCGGACGGGCGCCTACCGGTCCGAGATTCTC
AAGAGCCACGACTTCCTCGACGGCTTCATCAACGAGAAGTGGCGTCGCTGGATCCTCAATGCCGACGACGACAAC
TTCGTCACCCGTTGGCTGGTCTCTCACAAGCACAAGACGTGGATTCAGTACGGGCCCGAGTGCGAGCTCGAGACG
ACGCTCGAGAACAACCGAAAGTTCCTCTATCAATGCACGCGCTGGGCCCGCAGCAACTGGCGTAGCAACTGGACC
AGCCTCGTCCAGGAGCGGCACGTCTGGAGACAGCAGCCTTGGTGCACGTACGCGCTTCACATTGCCACCTTTACC
TCGCTCGCCTTCGTCGTCGACCCCCTGCTCCTGATATCGTACGGTGAAGCTGGTCGGGCTCTGGAGGCGCCACCC
CATCGACATCATCTTCCTGCCCGTGTCCATTATCTTTGGCTACTTCCACGGCCTCAT
Transcript >Ophio5|780
ATGAACGACGCCGCCATCGGCCAGCTGTTGGCCGGGATTGCGGGCCGCGCCATTGTGCGCCTGATTCACTCTCCC
CGTCACGGCTCCTCCCCTATCGTGTGGGCCATTGTCTTCTGGATCCTATGGATACATCGTTACCTTCGCCTGCTC
GTCCATTGCGTCAGCCACTGGACCTACAAATCGAAGCCGATCCCGGATAACCCGAGCTATACTTCCAAGGACGTC
ACCGTTGTCCTCCCGACCATCCACAATGTCTTTGAAGAGCTGCGACCGTCGATCGAGAGCATCCTTATATGCGAC
CCGGAAGAGCTGATTCTCGTCACGACGGACCCCAAGCGCGTCGAACTGGAGAAGCTGGCGGCCTCGCTCAGGGTC
GACGACGGCAATAAGACGAGATGTAACAGGGTCCGTGTCTTCAGCACGCCCATCGCCAACAAGCGGCTCCAGGTG
CGCGAGGCTCTTCCGCATGTCAACACGGCCATCACCGTCATGGTCGACGACGACGTCACCTGGCCCTCGACCATG
ATCCCCTGGATTCTGGCCCCTTTCGAAGACAAGGACATGGGCGGCGTCGGCACCTGTCAACGCGCCAAACGCGAC
CGGTCCGGCTCCTGGGCCGCCAGCATGTGGAACTGGCTCGGCCAAGCCTACATCGAGCGGCGCAACTTTGAGATA
TCGGCTACGCACAACATCGACGGCGGCACCTCGTGTATGTCCGGTCGGACGGGCGCCTACCGGTCCGAGATTCTC
AAGAGCCACGACTTCCTCGACGGCTTCATCAACGAGAAGTGGCGTCGCTGGATCCTCAATGCCGACGACGACAAC
TTCGTCACCCGTTGGCTGGTCTCTCACAAGCACAAGACGTGGATTCAGTACGGGCCCGAGTGCGAGCTCGAGACG
ACGCTCGAGAACAACCGAAAGTTCCTCTATCAATGCACGCGCTGGGCCCGCAGCAACTGGCGTAGCAACTGGACC
AGCCTCGTCCAGGAGCGGCACGTCTGGAGACAGCAGCCTTGGTGCACGTACGCGCTTCACATTGCCACCTTTACC
TCGCTCGCCTTCGTCGTCGACCCCCTGCTCCTGATATCGTACGGTGAAGCTGGTCGGGCTCTGGAGGCGCCACCC
CATCGACATCATCTTCCTGCCCGTGTCCATTATCTTTGGCTACTTCCACGGCCTCATTAA
Gene >Ophio5|780
ATGAACGACGCCGCCATCGGCCAGCTGTTGGCCGGGATTGCGGGCCGCGCCATTGTGCGCCTGATTCACTCTCCC
CGTCACGGCTCCTCCCCTATCGTGTGGGCCATTGTCTTCTGGATCCTATGGTAACGTTGGCTACCCCCCGACCGA
GGTCTCGGCGGATATTGACCTTTGAGGGGCACAGGATACATCGTTACCTTCGCCTGCTCGTCCATTGCGTCAGCC
ACTGGACCTACAAATCGAAGCCGATCCCGGATAACCCGAGCTATACTTCCAAGGACGTCACCGTTGTCCTCCCGA
CCATCCACAATGTCTTTGAAGAGCTGCGACCGTCGATCGAGAGCATCCTTATATGCGACCCGGAAGAGCTGATTC
TCGTCACGACGGACCCCAAGCGCGTCGAACTGGAGAAGCTGGCGGCCTCGCTCAGGGTCGACGACGGCAATAAGA
CGAGATGTAACAGGGTCCGTGTCTTCAGCACGCCCATCGCCAACAAGCGGCTCCAGGTGCGCGAGGCTCTTCCGC
ATGTCAACACGGCCATCACCGTCATGGTCGACGACGACGTCACCTGGCCCTCGACCATGATCCCCTGGATTCTGG
CCCCTTTCGAAGACAAGGACATGGGCGGCGTCGGCACCTGTCAACGCGCCAAACGCGACCGGTCCGGCTCCTGGG
CCGCCAGCATGTGGAACTGGCTCGGCCAAGCCTACATCGAGCGGCGCAACTTTGAGATATCGGCTACGCACAACA
TCGACGGCGGCACCTCGTGTATGTCCGGTCGGACGGGCGCCTACCGGTCCGAGATTCTCAAGAGCCACGACTTCC
TCGACGGCTTCATCAACGAGAAGTGGCGTCGCTGGATCCTCAATGCCGACGACGACAACTTCGTCACCCGTTGGC
TGGTCTCTCACAAGCACAAGACGTGGATTCAGTACGGGCCCGAGTGCGAGCTCGAGACGACGCTCGAGAACAACC
GAAAGTTCCTCTATCAATGCACGCGCTGGGCCCGCAGCAACTGGCGTAGCAACTGGACCAGCCTCGTCCAGGAGC
GGCACGTCTGGAGGTAAGGAGGAGACGAGCGAATGACATACTTGGCAGAATGACTGCTGATCCCGAGAGCTCTTC
TCTTGGTATAGACAGCAGCCTTGGTGCACGTACGCGCTTCACATTGCCACCTTTACCTCGCTCGCCTTCGTCGTC
GACCCCCTGCTCCTGATATCGTGTTGGTTGGCCACGTCCGAGTGGGACCTGTATCAGCGCCAATGGGCCTTTTGG
ACCCTGTTCGTCTTCATCTTCGCCTTCACCAAGACGGTGAAGCTGGTCGGGCTCTGGAGGCGCCACCCCATCGAC
ATCATCTTCCTGCCCGTGTCCATTATCTTTGGCTACTTCCACGGCCTCATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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