© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|7751 |
| Gene name | |
| Location | scaffold_789:3556..4583 |
| Strand | + |
| Gene length (bp) | 1027 |
| Transcript length (bp) | 531 |
| Coding sequence length (bp) | 528 |
| Protein length (aa) | 176 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.5496 | 0.4844 | 0.644 | 0.1101 | 0.2859 | 0.0849 | 0.2081 | 0.1459 | 0.1636 | 0.1172 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 16344 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps kimflemingae | Ophio5|7751 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|7751 MDRALVVYFSPVFYPLAIVILMPSSIEPVVFCSCLLQANDSRPWNKREYRYIPKSPSASTDAANHDPPVAALSGI AFVPASPVAAQLGRLAIPSKYSQAASCSTAALRSTRLVSTKTDSAFVSRSATLYRRMHGLGMTQPPRQHRLGFPQ HLPSACRKGTRNDGNHVYRSISLLET |
| Coding | >Ophio5|7751 ATGGATCGTGCTCTTGTCGTTTATTTCTCTCCTGTTTTCTACCCTCTCGCCATCGTCATCTTGATGCCCTCGTCC ATCGAGCCCGTCGTCTTTTGCAGCTGCCTGCTACAAGCAAACGACTCGCGTCCCTGGAATAAGCGCGAGTATCGC TACATCCCAAAATCCCCGTCAGCCTCGACCGACGCTGCCAATCATGATCCGCCCGTCGCAGCGCTGAGTGGTATT GCTTTTGTACCCGCTTCGCCTGTCGCAGCCCAGCTCGGCCGTCTCGCGATACCCAGCAAATACTCCCAAGCCGCA TCATGTAGTACCGCCGCTCTACGCTCTACCAGGCTCGTCAGCACCAAGACCGACTCGGCATTCGTTTCCCGCTCG GCTACCCTATACCGTCGGATGCATGGACTCGGCATGACACAACCACCTCGACAACACCGACTAGGGTTTCCTCAA CATCTACCTTCGGCCTGCAGGAAAGGCACAAGGAATGATGGAAATCATGTCTATCGATCGATCTCATTGCTCGAG ACA |
| Transcript | >Ophio5|7751 ATGGATCGTGCTCTTGTCGTTTATTTCTCTCCTGTTTTCTACCCTCTCGCCATCGTCATCTTGATGCCCTCGTCC ATCGAGCCCGTCGTCTTTTGCAGCTGCCTGCTACAAGCAAACGACTCGCGTCCCTGGAATAAGCGCGAGTATCGC TACATCCCAAAATCCCCGTCAGCCTCGACCGACGCTGCCAATCATGATCCGCCCGTCGCAGCGCTGAGTGGTATT GCTTTTGTACCCGCTTCGCCTGTCGCAGCCCAGCTCGGCCGTCTCGCGATACCCAGCAAATACTCCCAAGCCGCA TCATGTAGTACCGCCGCTCTACGCTCTACCAGGCTCGTCAGCACCAAGACCGACTCGGCATTCGTTTCCCGCTCG GCTACCCTATACCGTCGGATGCATGGACTCGGCATGACACAACCACCTCGACAACACCGACTAGGGTTTCCTCAA CATCTACCTTCGGCCTGCAGGAAAGGCACAAGGAATGATGGAAATCATGTCTATCGATCGATCTCATTGCTCGAG ACATGA |
| Gene | >Ophio5|7751 ATGGATCGTGCTCTTGTCGTTTATTGTACGACTAACCCTTTAGCATGGGCTCCCTTTTTTTTTCTTTTTTTTTTC ATATCCGTCTCATCTCACTCTCTACACCTACCTAGTCTCTCCTGTTTTCTACCCTCTCGCCATCGTCATCTTGAT GCCCTCGTCCATCGAGCCCGTCGTCTTTTGCAGCTGCCTGCGTCAGTCGTCGGACGAGCCCCGTCGAGACTAAAA AAGAAAAGAAACAAAAAAGAGAAACAAAGTCCCGCTCCATGCAAACATCATGCGCCAGTACAAGCAAACGACTCG CGTCCCTGGAATAAGCGCGAGTATCGCTACATCCCAAAATCCCCGTCAGCCTCGACCGACGCTGCCAATCATGAT CCGCCCGTCGCAGCGCTGAGTGGTATTGCTTTTGTACCCGCTTCGCCTGTCGCAGCCCAGCTCGGCCGTCTCGCG ATACCCAGCAAATACTCCCAAGCCGCATCATGTAGTACCGGTACGCAAGTCCAATCGAACGGCTCGTCCCTTGAA AAAAGGCCGCTAAAACTCGGATCCGTTGGCCGATGATGCTGCTCTGCTCGGCTGGCCGGCACTGGCACGGCTAAT TCTTGCCGGTCAGCCGCTCTACGCTCTACCAGGTACTTATCGCTGGTCTTGAAGTCTGCCTTCTTGTCGTCCTTT GCCCTTTGCCTTCTTCTCTGCTCACTGCCTCTGCCCACTGCTCTTCTCCCTTCTCTACTTTCGCTCTCCGCCGTC ATCGTGTATTCGATCCGAAAGAAGCCATTGCCGCTTTCCGCATTTGGCCTGTGGATATCCCCCCTGATGCTCATT TAGGCTCGTCAGCACCAAGACCGACTCGGCATTCGTTTCCCGCTCGGCTACCCTATACCGTCGGATGCATGGACT CGGCATGACACAACCACCTCGACAACACCGACTAGGGTTTCCTCAACATCTACCTTCGGCCTGCAGGAAAGGCAC AAGGAATGATGGAAATCATGTCTATCGATCGATCTCATTGCTCGAGACATGA |