Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7729
Gene name
Locationscaffold_781:872..2218
Strand-
Gene length (bp)1346
Transcript length (bp)1029
Coding sequence length (bp)1026
Protein length (aa) 342

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02353 CMAS Mycolic acid cyclopropane synthetase 9.4E-37 62 327
PF08241 Methyltransf_11 Methyltransferase domain 1.3E-15 121 219
PF13649 Methyltransf_25 Methyltransferase domain 1.1E-14 120 215
PF13847 Methyltransf_31 Methyltransferase domain 2.8E-12 115 222
PF13489 Methyltransf_23 Methyltransferase domain 2.6E-11 98 235
PF08242 Methyltransf_12 Methyltransferase domain 7.1E-11 121 217
PF05175 MTS Methyltransferase small domain 2.9E-07 116 220
PF01209 Ubie_methyltran ubiE/COQ5 methyltransferase family 2.7E-05 112 228

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q5C9L6|CNMT_THLFG (S)-coclaurine N-methyltransferase OS=Thalictrum flavum subsp. glaucum PE=1 SV=1 12 338 5.0E-72
sp|Q7XB08|CNMT_PAPSO (S)-coclaurine N-methyltransferase OS=Papaver somniferum GN=CNMT PE=1 SV=1 7 338 2.0E-69
sp|Q108P1|TNMT_PAPSO (S)-tetrahydroprotoberberine N-methyltransferase OS=Papaver somniferum PE=1 SV=1 10 338 7.0E-54
sp|C3SBS8|TNMT_ESCCA (S)-tetrahydroprotoberberine N-methyltransferase OS=Eschscholzia californica PE=1 SV=1 45 338 7.0E-54
sp|C3SBU5|TNMT1_PAPBR (S)-tetrahydroprotoberberine N-methyltransferase 1 OS=Papaver bracteatum PE=1 SV=1 10 338 3.0E-52
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Swissprot ID Swissprot Description Start End E-value
sp|Q5C9L6|CNMT_THLFG (S)-coclaurine N-methyltransferase OS=Thalictrum flavum subsp. glaucum PE=1 SV=1 12 338 5.0E-72
sp|Q7XB08|CNMT_PAPSO (S)-coclaurine N-methyltransferase OS=Papaver somniferum GN=CNMT PE=1 SV=1 7 338 2.0E-69
sp|Q108P1|TNMT_PAPSO (S)-tetrahydroprotoberberine N-methyltransferase OS=Papaver somniferum PE=1 SV=1 10 338 7.0E-54
sp|C3SBS8|TNMT_ESCCA (S)-tetrahydroprotoberberine N-methyltransferase OS=Eschscholzia californica PE=1 SV=1 45 338 7.0E-54
sp|C3SBU5|TNMT1_PAPBR (S)-tetrahydroprotoberberine N-methyltransferase 1 OS=Papaver bracteatum PE=1 SV=1 10 338 3.0E-52
sp|C3SBW0|PNMT_THLFG Pavine N-methyltransferase OS=Thalictrum flavum subsp. glaucum PE=1 SV=1 7 338 4.0E-51
sp|C3SBU4|TNMT2_PAPBR Probable (S)-tetrahydroprotoberberine N-methyltransferase 2 OS=Papaver bracteatum PE=2 SV=1 21 338 1.0E-50
sp|P0A9H7|CFA_ECOLI Cyclopropane-fatty-acyl-phospholipid synthase OS=Escherichia coli (strain K12) GN=cfa PE=1 SV=2 65 332 8.0E-27
sp|P0A9H8|CFA_ECOL6 Cyclopropane-fatty-acyl-phospholipid synthase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=cfa PE=3 SV=2 65 332 8.0E-27
sp|Q7U1K1|MMAA4_MYCBO Hydroxymycolate synthase MmaA4 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=cmaA PE=1 SV=1 48 334 4.0E-19
sp|P9WPB3|CMAS3_MYCTU Cyclopropane mycolic acid synthase 3 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=pcaA PE=1 SV=1 65 321 5.0E-19
sp|P9WPB2|CMAS3_MYCTO Cyclopropane mycolic acid synthase 3 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=pcaA PE=3 SV=1 65 321 5.0E-19
sp|A5U866|CMAS1_MYCTA Cyclopropane mycolic acid synthase 1 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=cmaA1 PE=1 SV=1 55 321 1.0E-18
sp|A5U027|MMAA4_MYCTA Hydroxymycolate synthase MmaA4 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mmaA4 PE=1 SV=1 48 334 1.0E-18
sp|Q79FX8|MMAA4_MYCTU Hydroxymycolate synthase MmaA4 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=mmaA4 PE=1 SV=1 48 334 1.0E-18
sp|P9WPB6|CMAS1_MYCTO Cyclopropane mycolic acid synthase 1 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=cmaA1 PE=3 SV=1 55 321 1.0E-18
sp|P9WPB7|CMAS1_MYCTU Cyclopropane mycolic acid synthase 1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=cmaA1 PE=1 SV=1 55 321 1.0E-18
sp|Q6MX39|UMAA_MYCTU S-adenosylmethionine-dependent methyltransferase UmaA OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=umaA PE=1 SV=1 68 321 4.0E-18
sp|Q7U1J9|MMAA2_MYCBO Cyclopropane mycolic acid synthase MmaA2 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=cmaC PE=1 SV=1 65 321 1.0E-15
sp|O69687|FAMT_MYCTU Probable fatty acid methyltransferase Rv3720 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv3720 PE=1 SV=4 62 284 3.0E-15
sp|Q79FX6|MMAA2_MYCTU Cyclopropane mycolic acid synthase MmaA2 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=mmaA2 PE=1 SV=1 65 321 3.0E-15
sp|A5U029|MMAA2_MYCTA Cyclopropane mycolic acid synthase MmaA2 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mmaA2 PE=1 SV=1 65 321 3.0E-15
sp|P0A5Q1|MMAA1_MYCBO Mycolic acid methyltransferase MmaA1 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=cmaD PE=3 SV=1 64 321 6.0E-15
sp|P9WPB0|MMAA1_MYCTO Mycolic acid methyltransferase MmaA1 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=mmaA1 PE=3 SV=1 64 321 6.0E-15
sp|P9WPB1|MMAA1_MYCTU Mycolic acid methyltransferase MmaA1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=mmaA1 PE=1 SV=1 64 321 6.0E-15
sp|A5U030|MMAA1_MYCTA Mycolic acid methyltransferase MmaA1 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mmaA1 PE=1 SV=1 64 321 6.0E-15
sp|P9WPB5|CMAS2_MYCTU Cyclopropane mycolic acid synthase 2 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=cmaA2 PE=1 SV=1 62 328 3.0E-13
sp|P9WPB4|CMAS2_MYCTO Cyclopropane mycolic acid synthase 2 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=cmaA2 PE=3 SV=1 62 328 3.0E-13
sp|P0A5P1|CMAS2_MYCBO Cyclopropane mycolic acid synthase 2 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=cmaA2 PE=3 SV=1 62 328 3.0E-13
sp|Q49807|CMAS2_MYCLE Cyclopropane mycolic acid synthase 2 OS=Mycobacterium leprae (strain TN) GN=cmaA2 PE=3 SV=1 62 321 4.0E-13
sp|P0CH91|MMAA3_MYCTU Methoxy mycolic acid synthase MmaA3 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=mmaA3 PE=1 SV=1 65 321 6.0E-13
sp|A5U028|MMAA3_MYCTA Methoxy mycolic acid synthase MmaA3 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mmaA3 PE=1 SV=1 65 321 6.0E-13
sp|Q7U1K0|MMAA3_MYCBO Methoxy mycolic acid synthase MmaA3 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=cmaB PE=1 SV=1 65 321 6.0E-13
sp|Q8KZ94|REBMT_NOCAE Demethylrebeccamycin-D-glucose O-methyltransferase OS=Lechevalieria aerocolonigenes GN=rebM PE=1 SV=1 56 260 1.0E-11
sp|I1RNL0|C9MT2_GIBZE Sphingolipid C9-methyltransferase 2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=MT2 PE=3 SV=1 66 325 2.0E-11
sp|Q5APD4|C9MT_CANAL Sphingolipid C9-methyltransferase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MTS1 PE=1 SV=1 67 313 2.0E-11
sp|C4R7Z3|C9MT_PICPG Sphingolipid C9-methyltransferase OS=Komagataella pastoris (strain GS115 / ATCC 20864) GN=PAS_chr4_0465 PE=1 SV=1 67 325 4.0E-11
sp|I1RJD6|C9MT1_GIBZE Sphingolipid C9-methyltransferase 1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=MT1 PE=3 SV=1 67 325 9.0E-10
sp|P31049|FAMT_PSEPU Probable fatty acid methyltransferase OS=Pseudomonas putida PE=3 SV=1 67 220 2.0E-08
sp|Q9KJ20|GSDMT_ACTHA Glycine/sarcosine/dimethylglycine N-methyltransferase OS=Actinopolyspora halophila PE=1 SV=1 89 218 1.0E-07
sp|Q6FRZ7|ERG6_CANGA Sterol 24-C-methyltransferase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ERG6 PE=3 SV=1 61 220 2.0E-07
sp|Q96WX4|ERG6_PNECA Sterol 24-C-methyltransferase OS=Pneumocystis carinii GN=erg6 PE=2 SV=1 112 215 3.0E-07
sp|L7IP31|ERG6_MAGOY Sterol 24-C-methyltransferase OS=Magnaporthe oryzae (strain Y34) GN=ERG6 PE=2 SV=1 66 215 6.0E-07
sp|P0CT10|ERG6_MAGO7 Sterol 24-C-methyltransferase OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=ERG6 PE=3 SV=1 66 215 6.0E-07
sp|A0PQ29|PHMT2_MYCUA Probable phthiotriol/phenolphthiotriol dimycocerosates methyltransferase 2 OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_2009 PE=3 SV=1 95 215 9.0E-07
sp|A1BAN1|UBIE_PARDP Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Paracoccus denitrificans (strain Pd 1222) GN=ubiE PE=3 SV=1 115 228 1.0E-06
sp|Q759S7|ERG6_ASHGO Sterol 24-C-methyltransferase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ERG6 PE=3 SV=1 111 234 2.0E-06
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GO

GO Term Description Terminal node
GO:0008168 methyltransferase activity Yes
GO:0003824 catalytic activity No
GO:0016740 transferase activity No
GO:0003674 molecular_function No
GO:0016741 transferase activity, transferring one-carbon groups No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 41 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 133.49 72.58 194.41
CcL In ants, during behavior modification 39.82 19.71 59.92
CcD In ants, recently dead 34.99 16.48 53.50

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.000286 yes
SC16a CcD 0.000286 yes
CcL CcD 0.671780 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7729
MNYDWILDGGYLPHAVIRVGIRRQLRDRLSSIQATSLTEAVESKMAYLERLRQQPIAIETDKANEQHYEVGTGFL
AACLGPRMKYSACLYPGGNETIAQAEEAMLQLYLDRAELRDGMTILDLGCGWGSGALYFAEKLPNARITAFSNSR
TQKRHIDAEAHKRGLKNVAVITGNVVDYEFEHESFDRVVSIELFEHMKNYGLLMAKVSRALKPEGKLFVHMFAHR
TTPYDYEEGWMTTHFFSGGTMPSADLLLYFQQHLRVRRQWWVNGMHYSRTCEDWLSSMIVNKKRLMPHLIETYGD
DKAAAWYNRWLIFYMACSELFAYEGGDIWGIVHILFHKYSDA
Coding >Ophio5|7729
ATGAATTACGACTGGATCCTCGATGGCGGATACCTCCCCCATGCCGTCATCCGCGTCGGCATCCGCAGACAGCTC
CGCGACCGGCTTTCCTCCATCCAGGCAACGAGCCTCACCGAGGCTGTCGAGTCCAAGATGGCGTACTTGGAGAGG
CTGCGCCAGCAGCCCATTGCTATAGAGACGGACAAGGCTAATGAGCAGCACTACGAAGTGGGCACCGGCTTCCTG
GCCGCCTGCCTGGGCCCGCGCATGAAATACTCGGCCTGTCTATATCCTGGCGGAAACGAGACCATCGCCCAGGCT
GAGGAAGCCATGCTGCAACTCTATCTAGACAGGGCCGAGCTGAGGGACGGCATGACGATCCTCGACCTCGGGTGC
GGCTGGGGATCCGGCGCTTTGTACTTCGCCGAGAAACTGCCCAACGCACGCATCACTGCCTTTTCCAACTCGCGC
ACACAGAAACGGCACATCGATGCCGAAGCTCACAAACGAGGGCTGAAAAATGTCGCCGTCATCACAGGAAACGTC
GTTGACTACGAGTTCGAGCACGAAAGCTTTGACAGGGTTGTGTCTATAGAGCTTTTTGAACATATGAAGAACTAC
GGGCTCCTCATGGCCAAGGTGTCTCGGGCACTCAAGCCCGAGGGGAAGCTGTTTGTACACATGTTCGCCCATCGA
ACCACGCCCTACGACTATGAGGAAGGCTGGATGACGACGCATTTCTTCTCTGGTGGTACCATGCCGTCGGCCGAT
CTGCTGCTCTACTTTCAGCAGCACCTCCGAGTTCGACGCCAGTGGTGGGTCAACGGGATGCACTACTCACGGACA
TGCGAGGATTGGCTGTCTTCCATGATAGTGAACAAAAAGCGACTGATGCCGCACCTGATCGAGACATATGGAGAC
GATAAAGCGGCCGCGTGGTACAATCGGTGGCTCATCTTCTATATGGCATGCTCGGAGCTTTTTGCGTACGAGGGC
GGGGACATCTGGGGCATAGTGCACATTCTGTTTCACAAATACAGCGACGCG
Transcript >Ophio5|7729
ATGAATTACGACTGGATCCTCGATGGCGGATACCTCCCCCATGCCGTCATCCGCGTCGGCATCCGCAGACAGCTC
CGCGACCGGCTTTCCTCCATCCAGGCAACGAGCCTCACCGAGGCTGTCGAGTCCAAGATGGCGTACTTGGAGAGG
CTGCGCCAGCAGCCCATTGCTATAGAGACGGACAAGGCTAATGAGCAGCACTACGAAGTGGGCACCGGCTTCCTG
GCCGCCTGCCTGGGCCCGCGCATGAAATACTCGGCCTGTCTATATCCTGGCGGAAACGAGACCATCGCCCAGGCT
GAGGAAGCCATGCTGCAACTCTATCTAGACAGGGCCGAGCTGAGGGACGGCATGACGATCCTCGACCTCGGGTGC
GGCTGGGGATCCGGCGCTTTGTACTTCGCCGAGAAACTGCCCAACGCACGCATCACTGCCTTTTCCAACTCGCGC
ACACAGAAACGGCACATCGATGCCGAAGCTCACAAACGAGGGCTGAAAAATGTCGCCGTCATCACAGGAAACGTC
GTTGACTACGAGTTCGAGCACGAAAGCTTTGACAGGGTTGTGTCTATAGAGCTTTTTGAACATATGAAGAACTAC
GGGCTCCTCATGGCCAAGGTGTCTCGGGCACTCAAGCCCGAGGGGAAGCTGTTTGTACACATGTTCGCCCATCGA
ACCACGCCCTACGACTATGAGGAAGGCTGGATGACGACGCATTTCTTCTCTGGTGGTACCATGCCGTCGGCCGAT
CTGCTGCTCTACTTTCAGCAGCACCTCCGAGTTCGACGCCAGTGGTGGGTCAACGGGATGCACTACTCACGGACA
TGCGAGGATTGGCTGTCTTCCATGATAGTGAACAAAAAGCGACTGATGCCGCACCTGATCGAGACATATGGAGAC
GATAAAGCGGCCGCGTGGTACAATCGGTGGCTCATCTTCTATATGGCATGCTCGGAGCTTTTTGCGTACGAGGGC
GGGGACATCTGGGGCATAGTGCACATTCTGTTTCACAAATACAGCGACGCGTGA
Gene >Ophio5|7729
ATGAATTACGGTGCGTGCCCACCTCGTCCCTCTGCTTCCTGCAACTCCGGAGCTCACGCTCTCACCCTCCGTCCC
TCCATCAACAGACTGGATCCTCGATGGCGGATACCTCCCCCATGCCGTCATCCGCGTCGGCATCCGCAGACAGCT
CCGCGACCGGCTTTCCTCCATCCAGGCAACGAGCCTCACCGAGGCTGTCGAGTCCAAGATGGCGTACTTGGAGAG
GCTGCGCCAGCAGCCCATTGCTATAGAGACGGACAAGGCTAATGAGCAGCACTACGAAGTGGGCACCGGCTTCCT
GGCCGCCTGCCTGGGCCCGCGCATGAAATACTCGGCCTGTCTATATCCTGGCGGAAACGAGACCATCGCCCAGGC
TGAGGAAGCCATGCTGCAACTCTATCTAGACAGGGCCGAGCTGAGGGACGGCATGACGATCCTCGACCTCGGGTA
GGTGCACTTGCTTTCAACCCCTCCCGACGCTACAATGAATGCCCTTGTCATCTCTGATATTGAAAATAAAATCAC
AGGTGCGGCTGGGGATCCGGCGCTTTGTACTTCGCCGAGAAACTGCCCAACGCACGCATCACTGCCTTTTCCAAC
TCGCGCACACAGAAACGGCACATCGATGCCGAAGCTCACAAACGAGGGCTGAAAAATGTCGCCGTCATCACAGGA
AACGTCGTTGACTACGAGTTCGAGCACGAAAGCTTTGACAGGGTTGTGTCTATAGAGGCAAGTCCATCACCCGCC
AAAACGTCTACCCTCACTTTATGGTGAGCTTTCGTGAACACAAAACTGACACTCGCGGCCCAATGGATTGTGCCA
TCAGCTTTTTGAACATATGAAGAACTACGGGCTCCTCATGGCCAAGGTGTCTCGGGCACTCAAGCCCGAGGGGAA
GCTGTTTGTACACATGTTCGCCCATCGAACCACGCCCTACGACTATGAGGAAGGCTGGATGACGACGCATTTCTT
CTCTGGTGGTACCATGCCGTCGGCCGATCTGCTGCTCTACTTTCAGCAGCACCTCCGAGTTCGACGCCAGTGGTG
GGTCAACGGGATGCACTACTCACGGACATGCGAGGTTTGAACTGACCCCGACGATCCATCTGATGATTGGCCCAC
TGACACGCCGTCAAATGCACCAGGATTGGCTGTCTTCCATGATAGTGAACAAAAAGCGACTGATGCCGCACCTGA
TCGAGACATATGGAGACGATAAAGCGGCCGCGTGGTACAATCGGTGGCTCATCTTCTATATGGCATGCTCGGAGC
TTTTTGCGTACGAGGGCGGGGACATCTGGGGCATAGTGCACATTCTGTTTCACAAATACAGCGACGCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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