Protein ID | Ophio5|7724 |
Gene name | |
Location | scaffold_78:42537..44226 |
Strand | + |
Gene length (bp) | 1689 |
Transcript length (bp) | 1629 |
Coding sequence length (bp) | 1626 |
Protein length (aa) | 542 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 357 | 379 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 354.06 | 155.74 | 552.39 |
CcL | In ants, during behavior modification | 242.59 | 105.62 | 379.55 |
CcD | In ants, recently dead | 261.05 | 122.86 | 399.25 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.186732 | no |
SC16a | CcD | 0.284084 | no |
CcL | CcD | 0.820642 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|7724 MDGQQPSSLPRAAKSPHFLHRHYHDNSRRRDATHDNSHHHSSRHGTPHLTATCSDDATESLDELASDCDSSHARL QLRTVTEPSGSEQAPVADAAAYSNVAITGVSSQAATVSSASDTVASSASDTVVSSALDTVASSGLDTATSNVNTA PSASTNTVTAATSSYTSASFAAPTSLLADIKTTSWLTTAPASTPSPITSTHAIFSDLRNGTNAMPNANSSLATSP LTVSSSPSNSSLPSSLNSSSPTTSSFDVSILSAPTSFTRTSTESQVTSLVREVVTKTDLESESTESADAQSTSFV TEFFDDSSSSLPATASTSSGGGAVAPETTGSIPPNKGSGTRSNAAAPPEALPPKARVIVGVVTSVAGVAFIMLLA LLALKYNKKRRDGRQLLGGGHLGSMTPRGITGSDSMTTVEVPGLPTTPAPPTGFGGSRGDAPAERGFYRVAGRKL PPVLMTGGDGFSDPRDTMLSDNSSEALDPAAGGSRPLALGAPMRPVSGIPIMRSGPARTPVTQNPFADPPSSPLA QGGPPGSRDRSRFHEGI |
Coding | >Ophio5|7724 ATGGACGGCCAGCAGCCGTCGTCACTCCCTCGGGCTGCTAAATCACCGCACTTTCTGCACCGTCATTATCATGAC AATTCCCGCCGTCGCGACGCTACTCACGACAACTCGCATCACCATTCTTCTCGTCATGGAACGCCGCACCTGACG GCCACTTGCTCCGACGACGCCACGGAAAGCCTTGACGAGCTCGCCTCTGACTGCGATTCCTCACATGCGCGACTC CAGCTTCGCACCGTCACCGAACCCTCTGGCTCTGAGCAAGCCCCTGTCGCAGACGCAGCCGCCTACAGCAACGTC GCCATTACCGGCGTGAGCTCGCAGGCGGCTACCGTCAGCTCTGCGTCAGACACCGTCGCCAGCTCGGCCTCGGAC ACGGTCGTCAGCTCTGCCTTGGACACTGTCGCCAGCTCTGGTCTGGACACGGCCACTAGCAACGTCAATACCGCC CCCTCGGCCAGTACTAATACCGTCACGGCCGCCACGTCCTCTTACACCAGCGCCTCTTTCGCAGCTCCAACTAGC CTTCTGGCAGACATCAAGACGACGTCGTGGCTCACAACTGCCCCGGCGTCCACTCCTTCACCCATCACCTCCACA CATGCCATCTTCAGCGATCTACGTAATGGAACTAATGCTATGCCTAATGCAAACTCGTCGCTCGCTACCTCTCCT CTCACCGTCTCTTCGTCTCCCTCCAACTCGTCGCTGCCGTCGTCTCTGAACTCTTCGTCACCCACCACCTCCTCT TTTGATGTGTCCATACTGTCGGCACCGACGTCTTTCACCCGGACGTCTACCGAGTCGCAGGTTACTTCGTTGGTA CGCGAAGTCGTGACGAAAACGGACCTTGAAAGCGAGTCGACGGAGTCTGCAGACGCACAGAGCACCTCTTTTGTC ACCGAATTCTTCGACGACTCATCGTCTTCTCTTCCGGCGACAGCTAGTACGAGCTCAGGTGGAGGCGCCGTCGCT CCTGAAACTACCGGGAGCATTCCACCAAACAAAGGCTCGGGAACCAGGTCCAACGCTGCGGCGCCCCCGGAAGCG CTGCCCCCAAAGGCGCGCGTCATTGTCGGCGTCGTTACCAGCGTCGCTGGCGTCGCATTCATCATGCTTCTCGCG CTTCTGGCTCTCAAATACAACAAGAAGCGCAGGGATGGCCGCCAGTTACTCGGAGGTGGTCACCTGGGCTCGATG ACACCCAGGGGTATTACGGGCAGCGACTCGATGACGACGGTCGAAGTGCCGGGCCTGCCGACGACCCCCGCCCCC CCCACCGGATTTGGGGGCAGCAGGGGTGACGCGCCAGCGGAGCGGGGCTTCTACCGAGTGGCTGGTCGGAAGCTA CCGCCGGTCCTGATGACGGGCGGTGACGGCTTCTCGGACCCCCGGGATACCATGCTGAGCGACAACTCCTCCGAG GCTCTGGACCCGGCGGCAGGCGGCTCACGTCCGTTGGCCCTCGGTGCGCCAATGAGGCCCGTCAGTGGGATTCCT ATTATGCGCTCTGGACCGGCCCGTACGCCCGTCACGCAGAATCCATTTGCCGATCCCCCATCTTCGCCGTTAGCG CAGGGTGGCCCGCCGGGATCGCGGGATCGATCCAGGTTTCACGAAGGGATA |
Transcript | >Ophio5|7724 ATGGACGGCCAGCAGCCGTCGTCACTCCCTCGGGCTGCTAAATCACCGCACTTTCTGCACCGTCATTATCATGAC AATTCCCGCCGTCGCGACGCTACTCACGACAACTCGCATCACCATTCTTCTCGTCATGGAACGCCGCACCTGACG GCCACTTGCTCCGACGACGCCACGGAAAGCCTTGACGAGCTCGCCTCTGACTGCGATTCCTCACATGCGCGACTC CAGCTTCGCACCGTCACCGAACCCTCTGGCTCTGAGCAAGCCCCTGTCGCAGACGCAGCCGCCTACAGCAACGTC GCCATTACCGGCGTGAGCTCGCAGGCGGCTACCGTCAGCTCTGCGTCAGACACCGTCGCCAGCTCGGCCTCGGAC ACGGTCGTCAGCTCTGCCTTGGACACTGTCGCCAGCTCTGGTCTGGACACGGCCACTAGCAACGTCAATACCGCC CCCTCGGCCAGTACTAATACCGTCACGGCCGCCACGTCCTCTTACACCAGCGCCTCTTTCGCAGCTCCAACTAGC CTTCTGGCAGACATCAAGACGACGTCGTGGCTCACAACTGCCCCGGCGTCCACTCCTTCACCCATCACCTCCACA CATGCCATCTTCAGCGATCTACGTAATGGAACTAATGCTATGCCTAATGCAAACTCGTCGCTCGCTACCTCTCCT CTCACCGTCTCTTCGTCTCCCTCCAACTCGTCGCTGCCGTCGTCTCTGAACTCTTCGTCACCCACCACCTCCTCT TTTGATGTGTCCATACTGTCGGCACCGACGTCTTTCACCCGGACGTCTACCGAGTCGCAGGTTACTTCGTTGGTA CGCGAAGTCGTGACGAAAACGGACCTTGAAAGCGAGTCGACGGAGTCTGCAGACGCACAGAGCACCTCTTTTGTC ACCGAATTCTTCGACGACTCATCGTCTTCTCTTCCGGCGACAGCTAGTACGAGCTCAGGTGGAGGCGCCGTCGCT CCTGAAACTACCGGGAGCATTCCACCAAACAAAGGCTCGGGAACCAGGTCCAACGCTGCGGCGCCCCCGGAAGCG CTGCCCCCAAAGGCGCGCGTCATTGTCGGCGTCGTTACCAGCGTCGCTGGCGTCGCATTCATCATGCTTCTCGCG CTTCTGGCTCTCAAATACAACAAGAAGCGCAGGGATGGCCGCCAGTTACTCGGAGGTGGTCACCTGGGCTCGATG ACACCCAGGGGTATTACGGGCAGCGACTCGATGACGACGGTCGAAGTGCCGGGCCTGCCGACGACCCCCGCCCCC CCCACCGGATTTGGGGGCAGCAGGGGTGACGCGCCAGCGGAGCGGGGCTTCTACCGAGTGGCTGGTCGGAAGCTA CCGCCGGTCCTGATGACGGGCGGTGACGGCTTCTCGGACCCCCGGGATACCATGCTGAGCGACAACTCCTCCGAG GCTCTGGACCCGGCGGCAGGCGGCTCACGTCCGTTGGCCCTCGGTGCGCCAATGAGGCCCGTCAGTGGGATTCCT ATTATGCGCTCTGGACCGGCCCGTACGCCCGTCACGCAGAATCCATTTGCCGATCCCCCATCTTCGCCGTTAGCG CAGGGTGGCCCGCCGGGATCGCGGGATCGATCCAGGTTTCACGAAGGGATATGA |
Gene | >Ophio5|7724 ATGGACGGCCAGCAGCCGTCGTCACTCCCTCGGGCTGCTAAATCACCGCACTTTCTGCACCGTCATTATCATGAC AATTCCCGCCGTCGCGACGCTACTCACGACAACTCGCATCACCATTCTTCTCGTCATGGAACGCCGCACCTGACG GCCACTTGCTCCGACGACGCCACGGAAAGCCTTGACGAGCTCGCCTCTGACTGCGATTCCTCACATGCGCGACTC CAGCTTCGCACCGTCACCGAACCCTCTGGCTCTGAGCAAGCCCCTGTCGCAGACGCAGCCGCCTACAGCAACGTC GCCATTACCGGCGTGAGCTCGCAGGCGGCTACCGTCAGCTCTGCGTCAGACACCGTCGCCAGCTCGGCCTCGGAC ACGGTCGTCAGCTCTGCCTTGGACACTGTCGCCAGCTCTGGTCTGGACACGGCCACTAGCAACGTCAATACCGCC CCCTCGGCCAGTACTAATACCGTCACGGCCGCCACGTCCTCTTACACCAGCGCCTCTTTCGCAGCTCCAACTAGC CTTCTGGCAGACATCAAGACGACGTCGTGGCTCACAACTGCCCCGGCGTCCACTCCTTCACCCATCACCTCCACA CATGCCATCTTCAGCGATCTACGTAATGGAACTAATGGTGAGTATACTCGCTGAAGCCTCGGCCTTTGTTGCCGT GGGACTGACGGTCTCTCATCAGCTATGCCTAATGCAAACTCGTCGCTCGCTACCTCTCCTCTCACCGTCTCTTCG TCTCCCTCCAACTCGTCGCTGCCGTCGTCTCTGAACTCTTCGTCACCCACCACCTCCTCTTTTGATGTGTCCATA CTGTCGGCACCGACGTCTTTCACCCGGACGTCTACCGAGTCGCAGGTTACTTCGTTGGTACGCGAAGTCGTGACG AAAACGGACCTTGAAAGCGAGTCGACGGAGTCTGCAGACGCACAGAGCACCTCTTTTGTCACCGAATTCTTCGAC GACTCATCGTCTTCTCTTCCGGCGACAGCTAGTACGAGCTCAGGTGGAGGCGCCGTCGCTCCTGAAACTACCGGG AGCATTCCACCAAACAAAGGCTCGGGAACCAGGTCCAACGCTGCGGCGCCCCCGGAAGCGCTGCCCCCAAAGGCG CGCGTCATTGTCGGCGTCGTTACCAGCGTCGCTGGCGTCGCATTCATCATGCTTCTCGCGCTTCTGGCTCTCAAA TACAACAAGAAGCGCAGGGATGGCCGCCAGTTACTCGGAGGTGGTCACCTGGGCTCGATGACACCCAGGGGTATT ACGGGCAGCGACTCGATGACGACGGTCGAAGTGCCGGGCCTGCCGACGACCCCCGCCCCCCCCACCGGATTTGGG GGCAGCAGGGGTGACGCGCCAGCGGAGCGGGGCTTCTACCGAGTGGCTGGTCGGAAGCTACCGCCGGTCCTGATG ACGGGCGGTGACGGCTTCTCGGACCCCCGGGATACCATGCTGAGCGACAACTCCTCCGAGGCTCTGGACCCGGCG GCAGGCGGCTCACGTCCGTTGGCCCTCGGTGCGCCAATGAGGCCCGTCAGTGGGATTCCTATTATGCGCTCTGGA CCGGCCCGTACGCCCGTCACGCAGAATCCATTTGCCGATCCCCCATCTTCGCCGTTAGCGCAGGGTGGCCCGCCG GGATCGCGGGATCGATCCAGGTTTCACGAAGGGATATGA |