Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7724
Gene name
Locationscaffold_78:42537..44226
Strand+
Gene length (bp)1689
Transcript length (bp)1629
Coding sequence length (bp)1626
Protein length (aa) 542

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 357 379 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7724
MDGQQPSSLPRAAKSPHFLHRHYHDNSRRRDATHDNSHHHSSRHGTPHLTATCSDDATESLDELASDCDSSHARL
QLRTVTEPSGSEQAPVADAAAYSNVAITGVSSQAATVSSASDTVASSASDTVVSSALDTVASSGLDTATSNVNTA
PSASTNTVTAATSSYTSASFAAPTSLLADIKTTSWLTTAPASTPSPITSTHAIFSDLRNGTNAMPNANSSLATSP
LTVSSSPSNSSLPSSLNSSSPTTSSFDVSILSAPTSFTRTSTESQVTSLVREVVTKTDLESESTESADAQSTSFV
TEFFDDSSSSLPATASTSSGGGAVAPETTGSIPPNKGSGTRSNAAAPPEALPPKARVIVGVVTSVAGVAFIMLLA
LLALKYNKKRRDGRQLLGGGHLGSMTPRGITGSDSMTTVEVPGLPTTPAPPTGFGGSRGDAPAERGFYRVAGRKL
PPVLMTGGDGFSDPRDTMLSDNSSEALDPAAGGSRPLALGAPMRPVSGIPIMRSGPARTPVTQNPFADPPSSPLA
QGGPPGSRDRSRFHEGI
Coding >Ophio5|7724
ATGGACGGCCAGCAGCCGTCGTCACTCCCTCGGGCTGCTAAATCACCGCACTTTCTGCACCGTCATTATCATGAC
AATTCCCGCCGTCGCGACGCTACTCACGACAACTCGCATCACCATTCTTCTCGTCATGGAACGCCGCACCTGACG
GCCACTTGCTCCGACGACGCCACGGAAAGCCTTGACGAGCTCGCCTCTGACTGCGATTCCTCACATGCGCGACTC
CAGCTTCGCACCGTCACCGAACCCTCTGGCTCTGAGCAAGCCCCTGTCGCAGACGCAGCCGCCTACAGCAACGTC
GCCATTACCGGCGTGAGCTCGCAGGCGGCTACCGTCAGCTCTGCGTCAGACACCGTCGCCAGCTCGGCCTCGGAC
ACGGTCGTCAGCTCTGCCTTGGACACTGTCGCCAGCTCTGGTCTGGACACGGCCACTAGCAACGTCAATACCGCC
CCCTCGGCCAGTACTAATACCGTCACGGCCGCCACGTCCTCTTACACCAGCGCCTCTTTCGCAGCTCCAACTAGC
CTTCTGGCAGACATCAAGACGACGTCGTGGCTCACAACTGCCCCGGCGTCCACTCCTTCACCCATCACCTCCACA
CATGCCATCTTCAGCGATCTACGTAATGGAACTAATGCTATGCCTAATGCAAACTCGTCGCTCGCTACCTCTCCT
CTCACCGTCTCTTCGTCTCCCTCCAACTCGTCGCTGCCGTCGTCTCTGAACTCTTCGTCACCCACCACCTCCTCT
TTTGATGTGTCCATACTGTCGGCACCGACGTCTTTCACCCGGACGTCTACCGAGTCGCAGGTTACTTCGTTGGTA
CGCGAAGTCGTGACGAAAACGGACCTTGAAAGCGAGTCGACGGAGTCTGCAGACGCACAGAGCACCTCTTTTGTC
ACCGAATTCTTCGACGACTCATCGTCTTCTCTTCCGGCGACAGCTAGTACGAGCTCAGGTGGAGGCGCCGTCGCT
CCTGAAACTACCGGGAGCATTCCACCAAACAAAGGCTCGGGAACCAGGTCCAACGCTGCGGCGCCCCCGGAAGCG
CTGCCCCCAAAGGCGCGCGTCATTGTCGGCGTCGTTACCAGCGTCGCTGGCGTCGCATTCATCATGCTTCTCGCG
CTTCTGGCTCTCAAATACAACAAGAAGCGCAGGGATGGCCGCCAGTTACTCGGAGGTGGTCACCTGGGCTCGATG
ACACCCAGGGGTATTACGGGCAGCGACTCGATGACGACGGTCGAAGTGCCGGGCCTGCCGACGACCCCCGCCCCC
CCCACCGGATTTGGGGGCAGCAGGGGTGACGCGCCAGCGGAGCGGGGCTTCTACCGAGTGGCTGGTCGGAAGCTA
CCGCCGGTCCTGATGACGGGCGGTGACGGCTTCTCGGACCCCCGGGATACCATGCTGAGCGACAACTCCTCCGAG
GCTCTGGACCCGGCGGCAGGCGGCTCACGTCCGTTGGCCCTCGGTGCGCCAATGAGGCCCGTCAGTGGGATTCCT
ATTATGCGCTCTGGACCGGCCCGTACGCCCGTCACGCAGAATCCATTTGCCGATCCCCCATCTTCGCCGTTAGCG
CAGGGTGGCCCGCCGGGATCGCGGGATCGATCCAGGTTTCACGAAGGGATA
Transcript >Ophio5|7724
ATGGACGGCCAGCAGCCGTCGTCACTCCCTCGGGCTGCTAAATCACCGCACTTTCTGCACCGTCATTATCATGAC
AATTCCCGCCGTCGCGACGCTACTCACGACAACTCGCATCACCATTCTTCTCGTCATGGAACGCCGCACCTGACG
GCCACTTGCTCCGACGACGCCACGGAAAGCCTTGACGAGCTCGCCTCTGACTGCGATTCCTCACATGCGCGACTC
CAGCTTCGCACCGTCACCGAACCCTCTGGCTCTGAGCAAGCCCCTGTCGCAGACGCAGCCGCCTACAGCAACGTC
GCCATTACCGGCGTGAGCTCGCAGGCGGCTACCGTCAGCTCTGCGTCAGACACCGTCGCCAGCTCGGCCTCGGAC
ACGGTCGTCAGCTCTGCCTTGGACACTGTCGCCAGCTCTGGTCTGGACACGGCCACTAGCAACGTCAATACCGCC
CCCTCGGCCAGTACTAATACCGTCACGGCCGCCACGTCCTCTTACACCAGCGCCTCTTTCGCAGCTCCAACTAGC
CTTCTGGCAGACATCAAGACGACGTCGTGGCTCACAACTGCCCCGGCGTCCACTCCTTCACCCATCACCTCCACA
CATGCCATCTTCAGCGATCTACGTAATGGAACTAATGCTATGCCTAATGCAAACTCGTCGCTCGCTACCTCTCCT
CTCACCGTCTCTTCGTCTCCCTCCAACTCGTCGCTGCCGTCGTCTCTGAACTCTTCGTCACCCACCACCTCCTCT
TTTGATGTGTCCATACTGTCGGCACCGACGTCTTTCACCCGGACGTCTACCGAGTCGCAGGTTACTTCGTTGGTA
CGCGAAGTCGTGACGAAAACGGACCTTGAAAGCGAGTCGACGGAGTCTGCAGACGCACAGAGCACCTCTTTTGTC
ACCGAATTCTTCGACGACTCATCGTCTTCTCTTCCGGCGACAGCTAGTACGAGCTCAGGTGGAGGCGCCGTCGCT
CCTGAAACTACCGGGAGCATTCCACCAAACAAAGGCTCGGGAACCAGGTCCAACGCTGCGGCGCCCCCGGAAGCG
CTGCCCCCAAAGGCGCGCGTCATTGTCGGCGTCGTTACCAGCGTCGCTGGCGTCGCATTCATCATGCTTCTCGCG
CTTCTGGCTCTCAAATACAACAAGAAGCGCAGGGATGGCCGCCAGTTACTCGGAGGTGGTCACCTGGGCTCGATG
ACACCCAGGGGTATTACGGGCAGCGACTCGATGACGACGGTCGAAGTGCCGGGCCTGCCGACGACCCCCGCCCCC
CCCACCGGATTTGGGGGCAGCAGGGGTGACGCGCCAGCGGAGCGGGGCTTCTACCGAGTGGCTGGTCGGAAGCTA
CCGCCGGTCCTGATGACGGGCGGTGACGGCTTCTCGGACCCCCGGGATACCATGCTGAGCGACAACTCCTCCGAG
GCTCTGGACCCGGCGGCAGGCGGCTCACGTCCGTTGGCCCTCGGTGCGCCAATGAGGCCCGTCAGTGGGATTCCT
ATTATGCGCTCTGGACCGGCCCGTACGCCCGTCACGCAGAATCCATTTGCCGATCCCCCATCTTCGCCGTTAGCG
CAGGGTGGCCCGCCGGGATCGCGGGATCGATCCAGGTTTCACGAAGGGATATGA
Gene >Ophio5|7724
ATGGACGGCCAGCAGCCGTCGTCACTCCCTCGGGCTGCTAAATCACCGCACTTTCTGCACCGTCATTATCATGAC
AATTCCCGCCGTCGCGACGCTACTCACGACAACTCGCATCACCATTCTTCTCGTCATGGAACGCCGCACCTGACG
GCCACTTGCTCCGACGACGCCACGGAAAGCCTTGACGAGCTCGCCTCTGACTGCGATTCCTCACATGCGCGACTC
CAGCTTCGCACCGTCACCGAACCCTCTGGCTCTGAGCAAGCCCCTGTCGCAGACGCAGCCGCCTACAGCAACGTC
GCCATTACCGGCGTGAGCTCGCAGGCGGCTACCGTCAGCTCTGCGTCAGACACCGTCGCCAGCTCGGCCTCGGAC
ACGGTCGTCAGCTCTGCCTTGGACACTGTCGCCAGCTCTGGTCTGGACACGGCCACTAGCAACGTCAATACCGCC
CCCTCGGCCAGTACTAATACCGTCACGGCCGCCACGTCCTCTTACACCAGCGCCTCTTTCGCAGCTCCAACTAGC
CTTCTGGCAGACATCAAGACGACGTCGTGGCTCACAACTGCCCCGGCGTCCACTCCTTCACCCATCACCTCCACA
CATGCCATCTTCAGCGATCTACGTAATGGAACTAATGGTGAGTATACTCGCTGAAGCCTCGGCCTTTGTTGCCGT
GGGACTGACGGTCTCTCATCAGCTATGCCTAATGCAAACTCGTCGCTCGCTACCTCTCCTCTCACCGTCTCTTCG
TCTCCCTCCAACTCGTCGCTGCCGTCGTCTCTGAACTCTTCGTCACCCACCACCTCCTCTTTTGATGTGTCCATA
CTGTCGGCACCGACGTCTTTCACCCGGACGTCTACCGAGTCGCAGGTTACTTCGTTGGTACGCGAAGTCGTGACG
AAAACGGACCTTGAAAGCGAGTCGACGGAGTCTGCAGACGCACAGAGCACCTCTTTTGTCACCGAATTCTTCGAC
GACTCATCGTCTTCTCTTCCGGCGACAGCTAGTACGAGCTCAGGTGGAGGCGCCGTCGCTCCTGAAACTACCGGG
AGCATTCCACCAAACAAAGGCTCGGGAACCAGGTCCAACGCTGCGGCGCCCCCGGAAGCGCTGCCCCCAAAGGCG
CGCGTCATTGTCGGCGTCGTTACCAGCGTCGCTGGCGTCGCATTCATCATGCTTCTCGCGCTTCTGGCTCTCAAA
TACAACAAGAAGCGCAGGGATGGCCGCCAGTTACTCGGAGGTGGTCACCTGGGCTCGATGACACCCAGGGGTATT
ACGGGCAGCGACTCGATGACGACGGTCGAAGTGCCGGGCCTGCCGACGACCCCCGCCCCCCCCACCGGATTTGGG
GGCAGCAGGGGTGACGCGCCAGCGGAGCGGGGCTTCTACCGAGTGGCTGGTCGGAAGCTACCGCCGGTCCTGATG
ACGGGCGGTGACGGCTTCTCGGACCCCCGGGATACCATGCTGAGCGACAACTCCTCCGAGGCTCTGGACCCGGCG
GCAGGCGGCTCACGTCCGTTGGCCCTCGGTGCGCCAATGAGGCCCGTCAGTGGGATTCCTATTATGCGCTCTGGA
CCGGCCCGTACGCCCGTCACGCAGAATCCATTTGCCGATCCCCCATCTTCGCCGTTAGCGCAGGGTGGCCCGCCG
GGATCGCGGGATCGATCCAGGTTTCACGAAGGGATATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail