© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|7703 |
| Gene name | |
| Location | scaffold_778:1839..4023 |
| Strand | + |
| Gene length (bp) | 2184 |
| Transcript length (bp) | 1971 |
| Coding sequence length (bp) | 1968 |
| Protein length (aa) | 656 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.2453 | 0.1321 | 0.7499 | 0.1297 | 0.078 | 0.0238 | 0.3296 | 0.2833 | 0.2454 | 0.0055 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 18 | 0.999741 |
| Orthofinder run ID | 4 |
| Orthogroup | 5974 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|7703 MFYRCVVLVLALCFLSRAQVIPRPDPASQSNGPGDGDGYFYIIACTLPATVFRYGIDLCRPIPAGVGTYSPPELP GRLFAVAYRSPVEAMREFARSSRHQVHMFAFQHPANSTLVQISPGTYYSTNGWQWTVDQPGFFVRLRNNLRSFVH GNHRLRHPQAAGDEQLEDYVNALPWVQTRSMDELGRVPSRELGPGEAGQEMDGVFYVTTTMLPETVSSAGIHPGG LVGPGGVATLVSGSQTFVVAHRRPEDALRNFHHRTYHTPINPRQSVFVYAFRSEPLPILSEAEGQGQGAVMRRAW LGAEVASMARMPDEARSLIADRERGRDVTDEQLRAEILGRLEWLSPTTKNVELNASIDMCNRFGLWRRRTAAKKQ WPPFRPSWPKLPVVSKSVRGTRGASSIAALTQKLGTGSRQTNCTNLVVGAAENWMQSWDPQAALSLTYEIIDSFC PEVAESEAQPPPEAAWGQDDDTCAADPLPQQGASGVSEEEGGGACASTSSISDGCDQELSASEMMSRFWIQWEME RTNGTESHAQQVADFVGAQGLDPEYCLHALVSSPYWDISPRKRSAPPPAAAGRGIWNTYPLSATSNVDMILTTSK PTMAACCALRTRVKRTLCSNEYRTDKRRILKPPREIDVETSLEKPPVVGQVLPLEE |
| Coding | >Ophio5|7703 ATGTTTTATCGCTGCGTGGTCCTTGTCCTCGCTCTTTGTTTCCTGAGTCGAGCTCAGGTGATACCAAGACCCGAC CCGGCCTCCCAAAGCAATGGACCCGGAGACGGAGACGGATATTTCTACATCATCGCATGCACTCTACCGGCGACC GTCTTCCGATACGGAATCGATCTCTGCCGGCCTATTCCGGCAGGCGTCGGCACTTATAGTCCCCCTGAACTACCG GGCAGACTATTCGCCGTGGCATATCGAAGCCCAGTTGAGGCCATGCGTGAGTTTGCCAGGTCGAGCAGGCACCAG GTACACATGTTTGCTTTCCAGCACCCAGCGAACAGTACACTTGTGCAAATCTCGCCGGGCACATACTATAGCACC AACGGCTGGCAATGGACAGTTGACCAACCGGGCTTCTTCGTCCGTCTGCGCAACAACTTGAGATCTTTCGTCCAT GGTAACCATCGCCTACGTCACCCCCAAGCTGCAGGGGACGAGCAATTGGAAGACTACGTCAACGCCCTACCATGG GTTCAGACTCGCAGCATGGATGAACTCGGCCGTGTGCCATCTCGCGAGCTTGGGCCTGGCGAGGCAGGCCAAGAG ATGGACGGAGTATTCTACGTGACGACTACGATGCTGCCGGAGACGGTCTCGTCAGCCGGAATTCACCCTGGCGGC CTCGTCGGCCCCGGCGGCGTGGCAACCTTGGTGTCCGGGTCCCAGACGTTTGTCGTCGCCCACCGTCGGCCGGAA GACGCACTACGCAACTTCCACCATCGCACGTACCATACGCCCATTAACCCGAGACAGAGCGTTTTTGTCTACGCC TTCAGGTCGGAACCGTTACCGATCCTTTCCGAAGCCGAAGGGCAGGGTCAAGGTGCCGTGATGCGGAGGGCGTGG TTGGGGGCCGAGGTCGCTAGCATGGCTCGAATGCCTGACGAGGCGCGCAGCCTCATTGCCGACAGAGAACGGGGG CGGGATGTGACGGATGAGCAGCTCAGGGCTGAGATTCTCGGTCGTCTGGAATGGCTTTCGCCCACGACGAAAAAC GTCGAGCTCAATGCGTCGATAGACATGTGCAACCGTTTCGGACTCTGGCGGCGGCGAACCGCAGCCAAGAAGCAG TGGCCGCCTTTCCGACCCAGCTGGCCCAAGCTGCCTGTCGTGAGCAAGTCGGTACGCGGGACACGAGGGGCGAGC TCTATTGCGGCACTGACACAGAAGCTCGGTACAGGAAGCAGGCAAACCAACTGCACCAACTTGGTCGTCGGAGCG GCTGAGAACTGGATGCAAAGCTGGGATCCACAAGCGGCCTTGAGCTTGACCTATGAAATCATCGACTCCTTCTGT CCCGAGGTGGCCGAGTCGGAAGCTCAGCCTCCTCCTGAAGCAGCCTGGGGGCAGGACGACGACACGTGCGCTGCT GACCCCTTACCACAGCAAGGTGCTTCCGGAGTGAGTGAAGAAGAAGGTGGTGGTGCATGTGCCAGCACCAGCAGC ATCTCGGACGGATGTGACCAGGAATTGTCCGCATCCGAGATGATGAGCCGTTTTTGGATTCAGTGGGAGATGGAG CGAACAAACGGGACCGAGTCACACGCTCAGCAAGTCGCCGACTTCGTGGGCGCTCAAGGCCTCGACCCTGAATAC TGTCTCCACGCGCTCGTTTCCTCCCCATACTGGGATATTTCGCCCAGGAAAAGGTCAGCTCCGCCGCCGGCAGCT GCAGGACGAGGTATTTGGAACACGTACCCCTTGTCCGCTACGTCAAACGTTGACATGATATTGACGACGTCAAAA CCTACCATGGCTGCTTGCTGCGCTCTCCGCACACGAGTCAAACGAACCTTGTGCAGCAACGAGTACCGCACCGAC AAGAGGCGAATTCTAAAACCTCCCCGCGAAATCGACGTGGAAACTAGCTTGGAGAAGCCTCCTGTCGTTGGACAA GTACTACCCCTTGAAGAG |
| Transcript | >Ophio5|7703 ATGTTTTATCGCTGCGTGGTCCTTGTCCTCGCTCTTTGTTTCCTGAGTCGAGCTCAGGTGATACCAAGACCCGAC CCGGCCTCCCAAAGCAATGGACCCGGAGACGGAGACGGATATTTCTACATCATCGCATGCACTCTACCGGCGACC GTCTTCCGATACGGAATCGATCTCTGCCGGCCTATTCCGGCAGGCGTCGGCACTTATAGTCCCCCTGAACTACCG GGCAGACTATTCGCCGTGGCATATCGAAGCCCAGTTGAGGCCATGCGTGAGTTTGCCAGGTCGAGCAGGCACCAG GTACACATGTTTGCTTTCCAGCACCCAGCGAACAGTACACTTGTGCAAATCTCGCCGGGCACATACTATAGCACC AACGGCTGGCAATGGACAGTTGACCAACCGGGCTTCTTCGTCCGTCTGCGCAACAACTTGAGATCTTTCGTCCAT GGTAACCATCGCCTACGTCACCCCCAAGCTGCAGGGGACGAGCAATTGGAAGACTACGTCAACGCCCTACCATGG GTTCAGACTCGCAGCATGGATGAACTCGGCCGTGTGCCATCTCGCGAGCTTGGGCCTGGCGAGGCAGGCCAAGAG ATGGACGGAGTATTCTACGTGACGACTACGATGCTGCCGGAGACGGTCTCGTCAGCCGGAATTCACCCTGGCGGC CTCGTCGGCCCCGGCGGCGTGGCAACCTTGGTGTCCGGGTCCCAGACGTTTGTCGTCGCCCACCGTCGGCCGGAA GACGCACTACGCAACTTCCACCATCGCACGTACCATACGCCCATTAACCCGAGACAGAGCGTTTTTGTCTACGCC TTCAGGTCGGAACCGTTACCGATCCTTTCCGAAGCCGAAGGGCAGGGTCAAGGTGCCGTGATGCGGAGGGCGTGG TTGGGGGCCGAGGTCGCTAGCATGGCTCGAATGCCTGACGAGGCGCGCAGCCTCATTGCCGACAGAGAACGGGGG CGGGATGTGACGGATGAGCAGCTCAGGGCTGAGATTCTCGGTCGTCTGGAATGGCTTTCGCCCACGACGAAAAAC GTCGAGCTCAATGCGTCGATAGACATGTGCAACCGTTTCGGACTCTGGCGGCGGCGAACCGCAGCCAAGAAGCAG TGGCCGCCTTTCCGACCCAGCTGGCCCAAGCTGCCTGTCGTGAGCAAGTCGGTACGCGGGACACGAGGGGCGAGC TCTATTGCGGCACTGACACAGAAGCTCGGTACAGGAAGCAGGCAAACCAACTGCACCAACTTGGTCGTCGGAGCG GCTGAGAACTGGATGCAAAGCTGGGATCCACAAGCGGCCTTGAGCTTGACCTATGAAATCATCGACTCCTTCTGT CCCGAGGTGGCCGAGTCGGAAGCTCAGCCTCCTCCTGAAGCAGCCTGGGGGCAGGACGACGACACGTGCGCTGCT GACCCCTTACCACAGCAAGGTGCTTCCGGAGTGAGTGAAGAAGAAGGTGGTGGTGCATGTGCCAGCACCAGCAGC ATCTCGGACGGATGTGACCAGGAATTGTCCGCATCCGAGATGATGAGCCGTTTTTGGATTCAGTGGGAGATGGAG CGAACAAACGGGACCGAGTCACACGCTCAGCAAGTCGCCGACTTCGTGGGCGCTCAAGGCCTCGACCCTGAATAC TGTCTCCACGCGCTCGTTTCCTCCCCATACTGGGATATTTCGCCCAGGAAAAGGTCAGCTCCGCCGCCGGCAGCT GCAGGACGAGGTATTTGGAACACGTACCCCTTGTCCGCTACGTCAAACGTTGACATGATATTGACGACGTCAAAA CCTACCATGGCTGCTTGCTGCGCTCTCCGCACACGAGTCAAACGAACCTTGTGCAGCAACGAGTACCGCACCGAC AAGAGGCGAATTCTAAAACCTCCCCGCGAAATCGACGTGGAAACTAGCTTGGAGAAGCCTCCTGTCGTTGGACAA GTACTACCCCTTGAAGAGTAG |
| Gene | >Ophio5|7703 ATGTTTTATCGCTGCGTGGTCCTTGTCCTCGCTCTTTGTTTCCTGAGTCGAGCTCAGGTGATACCAAGACCCGAC CCGGCCTCCCAAAGCAATGGACCCGGAGACGGAGACGGATATTTCTACATCATCGCATGCACTCTACCGGCGACC GTCTTCCGATACGGAATCGATCTCTGCCGGCCTATTCCGGCAGGCGTCGGCACTTATAGTCCCCCTGAACTACCG GGCAGACTATTCGCCGTGGCATATCGAAGCCCAGTTGAGGCCATGCGTGAGTTTGCCAGGTCGAGCAGGCACCAG GTACACATGTTTGCTTTCCAGCACCCAGCGAACAGTACACTTGTGCAAATCTCGCCGGGCACATACTATAGCACC AACGGCTGGCAATGGACAGTTGACCAACCGGGCTTCTTCGTCCGTCTGCGCAACAACTTGAGATCTTTCGTCCAT GGTAACCATCGCCTACGTCACCCCCAAGCTGCAGGGGACGAGCAATTGGAAGACTACGTCAACGCCCTACCATGG GTTCAGACTCGCAGCATGGATGAACTCGGCCGTGTGCCATCTCGCGAGCTTGGGCCTGGCGAGGCAGGCCAAGAG ATGGACGGAGTATTCTACGTGACGACTACGATGCTGCCGGAGACGGTCTCGTCAGCCGGAATTCACCCTGGCGGC CTCGTCGGCCCCGGCGGCGTGGCAACCTTGGTGTCCGGGTCCCAGACGTTTGTCGTCGCCCACCGTCGGCCGGAA GACGCACTACGCAACTTCCACCATCGCACGTACCATACGCCCATTAACCCGAGACAGAGCGTTTTTGTCTACGCC TTCAGGTCGGAACCGTTACCGATCCTTTCCGAAGCCGAAGGGCAGGGTCAAGGTGCCGTGATGCGGAGGGCGTGG TTGGGGGCCGAGGTCGCTAGCATGGCTCGAATGCCTGACGAGGCGCGCAGCCTCATTGCCGACAGAGAACGGGGG CGGGATGTGACGGATGAGCAGCTCAGGGCTGAGATTCTCGGTCGTCTGGAATGGCTTTCGCCCACGACGAGTGCG TGTATCGGTCGATGCTTTTGTTTTGCTTTCCATGCTAACGGGCTTTAGTGTTGGCGAGACGTGCAGCTGCTAAAA GGGAGGCTAGAAAACGTCGAGCTCAATGCGTCGATAGACATGTGCAACCGTTTCGGACTCTGGCGGCGGCGAACC GCAGCCAAGAAGCAGTGGCCGCCTTTCCGACCCAGCTGGCCCAAGCTGCCTGTCGTGAGCAAGTCGGTACGCGGG ACACGAGGGGCGAGCTCTATTGCGGCACTGACACAGAAGCTCGGTACAGGAAGCAGGCAAACCAACTGCACCAAC TTGGTCGTCGGAGCGGCTGAGAACTGGATGCAAAGCTGGGATCCACAAGCGGCCTTGAGCTTGACCTATGAAATC ATCGACTCCTTCTGTCCCGAGGTGGCCGAGTCGGAAGCTCAGCCTCCTCCTGAAGCAGCCTGGGGGCAGGACGAC GACACGTGCGCTGCTGACCCCTTACCACAGCAAGGTGCTTCCGGAGTGAGTGAAGAAGAAGGTGGTGGTGCATGT GCCAGCACCAGCAGCATCTCGGACGGATGTGACCAGGAATTGTCCGCATCCGAGATGAGTACGAAAAAATCCAAG GGGTGGGGGGGGGGGGGGGCAAGCTTTTGAAGTGCTAACGGGGGAAACCTTTTGCATAGTGAGCCGTTTTTGGAT TCAGTGGGAGATGGAGCGAACAAACGGGACCGAGTCACACGCTCAGCAAGTCGCCGACTTCGTGGGCGCTCAAGG CCTCGACCCTGAATACTGTCTCCACGCGCTCGTTTCCTCCCCATACTGGGATATTTCGCCCAGGAAAAGGTCAGC TCCGCCGCCGGCAGCTGCAGGACGAGGTATTTGGAACACGTACCCCTTGTCCGCTACGTCAAACGTTGACATGAT ATTGACGACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAGCAAAACCTACCATGGCT GCTTGCTGCGCTCTCCGCACACGAGTCAAACGAACCTTGTGCAGCAACGAGTACCGCACCGACAAGAGGCGAATT CTAAAACCTCCCCGCGAAATCGACGTGGAAACTAGCTTGGAGAAGCCTCCTGTCGTTGGACAAGTACTACCCCTT GAAGAGTAG |