Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7688
Gene name
Locationscaffold_770:5440..6773
Strand-
Gene length (bp)1333
Transcript length (bp)1209
Coding sequence length (bp)1206
Protein length (aa) 402

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02116 STE2 Fungal pheromone mating factor STE2 GPCR 5.1E-73 23 305

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0004932 mating-type factor pheromone receptor activity Yes
GO:0016020 membrane Yes
GO:0007186 G protein-coupled receptor signaling pathway Yes
GO:0110165 cellular anatomical entity No
GO:0008150 biological_process No
GO:0004888 transmembrane signaling receptor activity No
GO:0050794 regulation of cellular process No
GO:0004930 G protein-coupled receptor activity No
GO:0065007 biological regulation No
GO:0007165 signal transduction No
GO:0038023 signaling receptor activity No
GO:0003674 molecular_function No
GO:0009987 cellular process No
GO:0005575 cellular_component No
GO:0050789 regulation of biological process No
GO:0060089 molecular transducer activity No
GO:0016503 pheromone receptor activity No
GO:0008528 G protein-coupled peptide receptor activity No
GO:0001653 peptide receptor activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 58 80 22
2 101 123 22
3 138 160 22
4 173 195 22
5 215 237 22
6 258 280 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 6.24 1.81 10.67
CcL In ants, during behavior modification 0.05 0.00 0.29
CcD In ants, recently dead 0.05 0.00 0.29

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.274982 no
SC16a CcD 0.264439 no
CcL CcD 1.000000 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7688
MGLAPPAGSSFLSEFPSKPEAGFEPADQILAFYARDGKRLIGVPMSVVDNFNDESISMAVNYGALVGACIVTLAA
LVVLTPLAKLRRPTAMMQMVALVICLVRGAFEISDFISPVIHFYVYWAGDYSGVPRGYIYKTLVGHFITMLANIA
IEIILMNQAWTMVSLFPRTARMLLVVVSAIMALVAAGLRVTLTVSLVRADIVSASRASIKWIEQGALISSTVTIF
WFCALFNAKLVLHLIANRGLLPSARKLSSMEILVMTNGLLMVIPVIFAGLEYGSFRNFEPALVTTTSVAVILPLG
TLAAQRTNTPISGAGFDRPPNFSGSGSSAVKRIRAGLYHFRKQSVSSSSASPNSKCERSQAGLHAGTARVEDPYD
LELRRIDSAGYPGIRIDQKLEQRYENV
Coding >Ophio5|7688
ATGGGCCTCGCCCCGCCGGCTGGGTCCTCTTTCTTGTCCGAGTTCCCGTCCAAGCCCGAGGCCGGATTCGAGCCG
GCCGATCAGATTCTCGCCTTCTACGCACGCGATGGTAAAAGGTTGATCGGCGTGCCCATGTCGGTGGTGGATAAC
TTCAACGACGAGTCCATCAGCATGGCCGTCAACTATGGTGCCTTGGTCGGAGCCTGTATCGTGACGCTGGCAGCC
CTGGTGGTGCTCACGCCGCTGGCCAAGCTTCGACGGCCCACGGCCATGATGCAAATGGTCGCTCTCGTCATTTGC
CTCGTACGCGGCGCCTTTGAGATATCCGACTTTATCTCGCCCGTCATTCACTTCTACGTCTACTGGGCTGGCGAT
TACTCGGGCGTTCCACGCGGTTACATATACAAGACTCTGGTCGGCCACTTCATCACTATGCTGGCCAATATCGCC
ATCGAGATTATCCTCATGAACCAGGCTTGGACCATGGTTTCGCTTTTCCCCAGGACGGCGAGGATGCTGCTGGTC
GTTGTGTCGGCCATCATGGCCCTGGTTGCTGCCGGCCTGCGTGTTACCCTTACCGTCTCGCTGGTTCGCGCCGAC
ATAGTCTCTGCCTCTCGGGCATCGATTAAATGGATTGAGCAAGGTGCTCTCATTTCCAGTACCGTCACCATCTTC
TGGTTCTGCGCCTTGTTCAACGCCAAGTTGGTTCTCCATCTCATCGCCAACCGCGGCCTGCTGCCCTCGGCTCGG
AAGCTGAGCTCCATGGAGATTCTCGTCATGACCAACGGACTCCTCATGGTCATCCCAGTCATCTTCGCCGGCCTC
GAATACGGCAGCTTCCGCAACTTCGAACCCGCCCTCGTCACCACCACGTCCGTCGCCGTCATCCTTCCCCTCGGC
ACCTTGGCCGCCCAGCGCACAAACACGCCCATCAGCGGTGCCGGCTTCGACCGCCCGCCTAACTTCTCGGGAAGC
GGCTCCTCCGCCGTCAAACGGATCCGCGCCGGCCTCTACCACTTTCGAAAGCAGAGTGTGTCCAGCAGCTCGGCA
TCACCAAACTCCAAGTGCGAGCGTAGCCAGGCCGGTCTCCATGCCGGGACCGCTCGCGTCGAAGACCCCTACGAT
CTGGAGCTACGCCGCATAGACTCGGCTGGCTATCCGGGCATCCGCATCGACCAGAAGCTGGAGCAGCGGTACGAG
AACGTC
Transcript >Ophio5|7688
ATGGGCCTCGCCCCGCCGGCTGGGTCCTCTTTCTTGTCCGAGTTCCCGTCCAAGCCCGAGGCCGGATTCGAGCCG
GCCGATCAGATTCTCGCCTTCTACGCACGCGATGGTAAAAGGTTGATCGGCGTGCCCATGTCGGTGGTGGATAAC
TTCAACGACGAGTCCATCAGCATGGCCGTCAACTATGGTGCCTTGGTCGGAGCCTGTATCGTGACGCTGGCAGCC
CTGGTGGTGCTCACGCCGCTGGCCAAGCTTCGACGGCCCACGGCCATGATGCAAATGGTCGCTCTCGTCATTTGC
CTCGTACGCGGCGCCTTTGAGATATCCGACTTTATCTCGCCCGTCATTCACTTCTACGTCTACTGGGCTGGCGAT
TACTCGGGCGTTCCACGCGGTTACATATACAAGACTCTGGTCGGCCACTTCATCACTATGCTGGCCAATATCGCC
ATCGAGATTATCCTCATGAACCAGGCTTGGACCATGGTTTCGCTTTTCCCCAGGACGGCGAGGATGCTGCTGGTC
GTTGTGTCGGCCATCATGGCCCTGGTTGCTGCCGGCCTGCGTGTTACCCTTACCGTCTCGCTGGTTCGCGCCGAC
ATAGTCTCTGCCTCTCGGGCATCGATTAAATGGATTGAGCAAGGTGCTCTCATTTCCAGTACCGTCACCATCTTC
TGGTTCTGCGCCTTGTTCAACGCCAAGTTGGTTCTCCATCTCATCGCCAACCGCGGCCTGCTGCCCTCGGCTCGG
AAGCTGAGCTCCATGGAGATTCTCGTCATGACCAACGGACTCCTCATGGTCATCCCAGTCATCTTCGCCGGCCTC
GAATACGGCAGCTTCCGCAACTTCGAACCCGCCCTCGTCACCACCACGTCCGTCGCCGTCATCCTTCCCCTCGGC
ACCTTGGCCGCCCAGCGCACAAACACGCCCATCAGCGGTGCCGGCTTCGACCGCCCGCCTAACTTCTCGGGAAGC
GGCTCCTCCGCCGTCAAACGGATCCGCGCCGGCCTCTACCACTTTCGAAAGCAGAGTGTGTCCAGCAGCTCGGCA
TCACCAAACTCCAAGTGCGAGCGTAGCCAGGCCGGTCTCCATGCCGGGACCGCTCGCGTCGAAGACCCCTACGAT
CTGGAGCTACGCCGCATAGACTCGGCTGGCTATCCGGGCATCCGCATCGACCAGAAGCTGGAGCAGCGGTACGAG
AACGTCTAG
Gene >Ophio5|7688
ATGGGCCTCGCCCCGCCGGCTGGGTCCTCTTTCTTGTCCGAGTTCCCGTCCAAGCCCGAGGCCGGATTCGAGCCG
GCCGATCAGATTCTCGCCTTCTACGCACGCGATGGTAAAAGGTTGATCGGCGTGCCCATGTCGGTGGTGGATAAC
TTCAACGACGAGTCCATCAGCATGGCCGTCAACTATGGTGCCTTGGTCGGAGCCTGTATCGTGACGCTGGCAGCC
CTGGTGGTGCTCACGCCGCTGGCCAAGCTTCGACGGCCCACGGCCATGATGCAAATGGTCGCTCTCGTCATTTGC
CTCGTACGCGGCGCCTTTGAGATATCCGACTTTATCTCGCCCGTCATTCACTTCTACGTCTACTGGGCTGGCGAT
TACTCGGGCGTTCCACGCGGTTACATATACAAGACTCTGGTCGGCCACTTCATCACTATGCTGGCCAATATCGCC
ATCGAGATTATCCTCATGAACCAGGCTTGGACCATGGTTTCGCTTTTCCCCAGGACGGCGAGGATGCTGCTGGTC
GTTGTGTCGGCCATCATGGCCCTGGTTGCTGCCGGCCTGCGTGTTACCCTTACCGTCTCGCTGGTTCGCGCCGAC
ATAGTCTCTGCCTCTCGGGCATCGATTAAATGGATTGAGCAAGGTGCTCTCATTTCCAGTACCGTCACCATCTTC
TGGTTCTGCGCCTTGTTCAACGCCAAGTTGGTTCTCCATCTCATCGCCAACCGCGGCCTGCTGCCCTCGGCTCGG
AAGCTGAGCTCCATGGAGATTCTCGTCATGACCAACGGACTCCTCATGGTCATCCCAGGTATTCCTCTCCTCCTG
CTCACTCCTCCCCCCCCCCCCTCCTCCCCCCTTTTGAAAAATAGTTTTATGAAGAAGAAGAAGAAGAAGAAGAAG
AAGAAGAAGAAGCTCTCCTCTAACTGATACAGTCATCTTCGCCGGCCTCGAATACGGCAGCTTCCGCAACTTCGA
ACCCGCCCTCGTCACCACCACGTCCGTCGCCGTCATCCTTCCCCTCGGCACCTTGGCCGCCCAGCGCACAAACAC
GCCCATCAGCGGTGCCGGCTTCGACCGCCCGCCTAACTTCTCGGGAAGCGGCTCCTCCGCCGTCAAACGGATCCG
CGCCGGCCTCTACCACTTTCGAAAGCAGAGTGTGTCCAGCAGCTCGGCATCACCAAACTCCAAGTGCGAGCGTAG
CCAGGCCGGTCTCCATGCCGGGACCGCTCGCGTCGAAGACCCCTACGATCTGGAGCTACGCCGCATAGACTCGGC
TGGCTATCCGGGCATCCGCATCGACCAGAAGCTGGAGCAGCGGTACGAGAACGTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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