Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|7685
Gene name
Location	scaffold_770:690..1224
Strand	+
Gene length (bp)	534
Transcript length (bp)	465
Coding sequence length (bp)	462
Protein length (aa)	154

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF16541	AltA1	Alternaria alternata allergen 1	2.3E-11	33	136

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 22	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|7685 MRASRLIAGSLFAASPSAATSAPDSKPTERVVITDFTVRQEWSFRGTRIRAVDFRLTGRNARGISCTVRDPEFPK PREAASCRDSKYRFMLYEGTRIDEFRLHIYHEMGLAVGLQGIGSVPTCCRDGGNGPNDYLCLQTLPTNAIDIDST PINP
Coding	>Ophio5\|7685 ATGCGCGCGTCAAGACTCATCGCCGGCAGCCTCTTCGCAGCCTCCCCCTCCGCCGCCACTTCAGCCCCCGATTCG AAGCCGACGGAGAGGGTCGTCATCACCGATTTCACAGTCCGTCAGGAATGGTCCTTCAGAGGCACAAGGATTAGG GCCGTCGACTTCAGGCTCACGGGCAGAAACGCCCGGGGCATCTCGTGCACGGTCAGGGACCCAGAGTTTCCCAAG CCCAGGGAGGCCGCCAGCTGCAGGGACTCCAAGTATCGCTTCATGTTGTATGAAGGCACCAGGATCGACGAATTC CGTCTGCATATTTACCATGAAATGGGTTTAGCTGTTGGGTTGCAGGGCATCGGTAGCGTGCCGACTTGTTGTCGC GACGGTGGCAACGGCCCCAACGACTATTTATGCCTACAAACGTTGCCGACAAATGCCATCGACATTGACTCCACG CCTATCAATCCG
Transcript	>Ophio5\|7685 ATGCGCGCGTCAAGACTCATCGCCGGCAGCCTCTTCGCAGCCTCCCCCTCCGCCGCCACTTCAGCCCCCGATTCG AAGCCGACGGAGAGGGTCGTCATCACCGATTTCACAGTCCGTCAGGAATGGTCCTTCAGAGGCACAAGGATTAGG GCCGTCGACTTCAGGCTCACGGGCAGAAACGCCCGGGGCATCTCGTGCACGGTCAGGGACCCAGAGTTTCCCAAG CCCAGGGAGGCCGCCAGCTGCAGGGACTCCAAGTATCGCTTCATGTTGTATGAAGGCACCAGGATCGACGAATTC CGTCTGCATATTTACCATGAAATGGGTTTAGCTGTTGGGTTGCAGGGCATCGGTAGCGTGCCGACTTGTTGTCGC GACGGTGGCAACGGCCCCAACGACTATTTATGCCTACAAACGTTGCCGACAAATGCCATCGACATTGACTCCACG CCTATCAATCCGTAG
Gene	>Ophio5\|7685 ATGCGCGCGTCAAGACTCATCGCCGGCAGCCTCTTCGCAGCCTCCCCCTCCGCCGCCACTTCAGCCCCCGATTCG AAGCCGACGGAGAGGGTCGTCATCACCGATTTCACAGTCCGTCAGGAATGGTCCTTCAGAGGCACAAGGATTAGG GCCGTCGACTTCAGGCTCACGGGCAGAAACGCCCGGGGCATCTCGTGCACGGTCAGGGACCCAGAGTTTCCCAAG CCCAGGGAGGCCGCCAGCTGCAGGGACTCCAAGTATCGCTTCATGTTGTATGAAGGCACCAGGATCGACGAATTC CGTCTGCATATTTACCATGAAATGGGTTTAGCGTGAGTCTGCCTTCAGAGTGAGACGGCGTAACGCGGTTCCTGC GGACTGACTTGCTATTTCTTCACCAGTGTTGGGTTGCAGGGCATCGGTAGCGTGCCGACTTGTTGTCGCGACGGT GGCAACGGCCCCAACGACTATTTATGCCTACAAACGTTGCCGACAAATGCCATCGACATTGACTCCACGCCTATC AATCCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail