Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7673
Gene name
Locationscaffold_77:6330..7467
Strand-
Gene length (bp)1137
Transcript length (bp)1137
Coding sequence length (bp)1134
Protein length (aa) 378

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01633 Choline_kinase Choline/ethanolamine kinase 2.8E-20 94 291
PF01636 APH Phosphotransferase enzyme family 4.0E-07 97 299

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P35790|CHKA_HUMAN Choline kinase alpha OS=Homo sapiens GN=CHKA PE=1 SV=3 111 305 1.0E-18
sp|O54804|CHKA_MOUSE Choline kinase alpha OS=Mus musculus GN=Chka PE=1 SV=3 111 305 4.0E-16
sp|Q01134|CHKA_RAT Choline kinase alpha OS=Rattus norvegicus GN=Chka PE=1 SV=2 111 305 5.0E-16
sp|Q9Y259|CHKB_HUMAN Choline/ethanolamine kinase OS=Homo sapiens GN=CHKB PE=1 SV=3 29 305 3.0E-13
sp|O55229|CHKB_MOUSE Choline/ethanolamine kinase OS=Mus musculus GN=Chkb PE=1 SV=3 6 305 3.0E-12
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Swissprot ID Swissprot Description Start End E-value
sp|P35790|CHKA_HUMAN Choline kinase alpha OS=Homo sapiens GN=CHKA PE=1 SV=3 111 305 1.0E-18
sp|O54804|CHKA_MOUSE Choline kinase alpha OS=Mus musculus GN=Chka PE=1 SV=3 111 305 4.0E-16
sp|Q01134|CHKA_RAT Choline kinase alpha OS=Rattus norvegicus GN=Chka PE=1 SV=2 111 305 5.0E-16
sp|Q9Y259|CHKB_HUMAN Choline/ethanolamine kinase OS=Homo sapiens GN=CHKB PE=1 SV=3 29 305 3.0E-13
sp|O55229|CHKB_MOUSE Choline/ethanolamine kinase OS=Mus musculus GN=Chkb PE=1 SV=3 6 305 3.0E-12
sp|O54783|CHKB_RAT Choline/ethanolamine kinase OS=Rattus norvegicus GN=Chkb PE=1 SV=3 29 280 6.0E-12
sp|O81024|EKI_ARATH Probable ethanolamine kinase OS=Arabidopsis thaliana GN=EMB1187 PE=2 SV=1 106 273 1.0E-10
sp|Q9SZ92|CK3_ARATH Probable choline kinase 3 OS=Arabidopsis thaliana GN=At4g09760 PE=2 SV=1 97 299 1.0E-07
sp|P46558|CKB1_CAEEL Choline kinase B1 OS=Caenorhabditis elegans GN=ckb-1 PE=2 SV=2 29 319 3.0E-07
sp|Q869T9|EKIA_DICDI Probable ethanolamine kinase A OS=Dictyostelium discoideum GN=etnkA PE=3 SV=1 107 326 1.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 54 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7673
MIAQTPIPVRLEAGKAPTKQTARDIVGAFLTKEWTSVDPQTLIVSYHDSFTNAHCVVERPHPSSRAPAEPLKVFI
KFHRPGFGALEAFRHLLPTKLEEARVCDMYSQNGSGAKVHGFFQAQDGTLGRVDEFLEARNMEPEDIEEPVIRTD
VARALATFHVMQAPLEKRPVEAYFKAVIRGLDTYHQMDKLKRLGHQSGISIDSLVDYPFGVKLRKVADKLEAMKA
KTGWCIHDVQFMNTMVKHDIRHGESRVALIDFEVVFWNYRAFDIGGHFMQKMFKWFDAESKIARCNRYTDAEKRH
FCDAYARRWNALTGDADSGDQVFVEAEYGYLLAIAFDVHNMLSFMCEENGTDPLDLLGLNKLFAEFVEQYERLGL
ETS
Coding >Ophio5|7673
ATGATTGCGCAGACACCCATTCCCGTGCGCCTTGAGGCCGGCAAGGCCCCGACCAAGCAAACAGCCAGAGACATT
GTCGGCGCCTTCCTGACCAAAGAATGGACCTCGGTAGATCCGCAGACCCTGATCGTCTCGTATCACGACTCCTTC
ACCAACGCCCACTGCGTGGTCGAGCGGCCGCACCCTTCCAGCCGCGCACCTGCGGAGCCGCTCAAGGTTTTCATC
AAGTTCCACAGGCCAGGCTTCGGCGCCCTCGAGGCCTTCCGACACCTGCTGCCAACCAAACTGGAGGAAGCGCGC
GTCTGTGACATGTACAGCCAGAATGGTTCAGGCGCAAAGGTGCACGGCTTCTTTCAGGCGCAGGACGGCACCCTC
GGGCGCGTCGACGAGTTTCTGGAGGCGCGAAACATGGAACCAGAGGATATCGAGGAACCCGTCATCAGGACCGAT
GTTGCTCGTGCGCTGGCCACGTTTCATGTGATGCAGGCGCCTCTGGAGAAAAGACCGGTGGAGGCTTACTTTAAA
GCCGTAATCCGCGGGCTCGACACATACCACCAGATGGACAAGTTGAAAAGGCTCGGACATCAAAGCGGAATCAGT
ATTGATAGCTTAGTTGACTACCCCTTCGGAGTGAAGCTGCGAAAAGTGGCGGACAAGCTGGAAGCCATGAAAGCC
AAGACAGGATGGTGCATCCACGATGTCCAGTTCATGAACACGATGGTCAAGCACGATATCCGTCATGGGGAGAGT
CGGGTGGCGCTAATTGACTTCGAGGTTGTGTTCTGGAACTACCGAGCCTTCGACATTGGCGGCCACTTTATGCAG
AAGATGTTCAAGTGGTTTGACGCCGAGAGCAAGATTGCCCGCTGCAACAGGTATACGGACGCGGAGAAGCGGCAC
TTCTGCGACGCCTACGCCCGCCGATGGAACGCCTTGACCGGGGACGCCGACTCGGGCGACCAGGTCTTCGTGGAG
GCCGAGTACGGGTACCTGCTGGCCATCGCCTTTGATGTGCATAACATGCTGAGCTTCATGTGTGAAGAGAACGGC
ACGGACCCGCTAGACCTGCTCGGTCTTAACAAGCTGTTCGCCGAGTTTGTAGAGCAGTACGAGAGGCTAGGGCTC
GAGACCTCG
Transcript >Ophio5|7673
ATGATTGCGCAGACACCCATTCCCGTGCGCCTTGAGGCCGGCAAGGCCCCGACCAAGCAAACAGCCAGAGACATT
GTCGGCGCCTTCCTGACCAAAGAATGGACCTCGGTAGATCCGCAGACCCTGATCGTCTCGTATCACGACTCCTTC
ACCAACGCCCACTGCGTGGTCGAGCGGCCGCACCCTTCCAGCCGCGCACCTGCGGAGCCGCTCAAGGTTTTCATC
AAGTTCCACAGGCCAGGCTTCGGCGCCCTCGAGGCCTTCCGACACCTGCTGCCAACCAAACTGGAGGAAGCGCGC
GTCTGTGACATGTACAGCCAGAATGGTTCAGGCGCAAAGGTGCACGGCTTCTTTCAGGCGCAGGACGGCACCCTC
GGGCGCGTCGACGAGTTTCTGGAGGCGCGAAACATGGAACCAGAGGATATCGAGGAACCCGTCATCAGGACCGAT
GTTGCTCGTGCGCTGGCCACGTTTCATGTGATGCAGGCGCCTCTGGAGAAAAGACCGGTGGAGGCTTACTTTAAA
GCCGTAATCCGCGGGCTCGACACATACCACCAGATGGACAAGTTGAAAAGGCTCGGACATCAAAGCGGAATCAGT
ATTGATAGCTTAGTTGACTACCCCTTCGGAGTGAAGCTGCGAAAAGTGGCGGACAAGCTGGAAGCCATGAAAGCC
AAGACAGGATGGTGCATCCACGATGTCCAGTTCATGAACACGATGGTCAAGCACGATATCCGTCATGGGGAGAGT
CGGGTGGCGCTAATTGACTTCGAGGTTGTGTTCTGGAACTACCGAGCCTTCGACATTGGCGGCCACTTTATGCAG
AAGATGTTCAAGTGGTTTGACGCCGAGAGCAAGATTGCCCGCTGCAACAGGTATACGGACGCGGAGAAGCGGCAC
TTCTGCGACGCCTACGCCCGCCGATGGAACGCCTTGACCGGGGACGCCGACTCGGGCGACCAGGTCTTCGTGGAG
GCCGAGTACGGGTACCTGCTGGCCATCGCCTTTGATGTGCATAACATGCTGAGCTTCATGTGTGAAGAGAACGGC
ACGGACCCGCTAGACCTGCTCGGTCTTAACAAGCTGTTCGCCGAGTTTGTAGAGCAGTACGAGAGGCTAGGGCTC
GAGACCTCGTAA
Gene >Ophio5|7673
ATGATTGCGCAGACACCCATTCCCGTGCGCCTTGAGGCCGGCAAGGCCCCGACCAAGCAAACAGCCAGAGACATT
GTCGGCGCCTTCCTGACCAAAGAATGGACCTCGGTAGATCCGCAGACCCTGATCGTCTCGTATCACGACTCCTTC
ACCAACGCCCACTGCGTGGTCGAGCGGCCGCACCCTTCCAGCCGCGCACCTGCGGAGCCGCTCAAGGTTTTCATC
AAGTTCCACAGGCCAGGCTTCGGCGCCCTCGAGGCCTTCCGACACCTGCTGCCAACCAAACTGGAGGAAGCGCGC
GTCTGTGACATGTACAGCCAGAATGGTTCAGGCGCAAAGGTGCACGGCTTCTTTCAGGCGCAGGACGGCACCCTC
GGGCGCGTCGACGAGTTTCTGGAGGCGCGAAACATGGAACCAGAGGATATCGAGGAACCCGTCATCAGGACCGAT
GTTGCTCGTGCGCTGGCCACGTTTCATGTGATGCAGGCGCCTCTGGAGAAAAGACCGGTGGAGGCTTACTTTAAA
GCCGTAATCCGCGGGCTCGACACATACCACCAGATGGACAAGTTGAAAAGGCTCGGACATCAAAGCGGAATCAGT
ATTGATAGCTTAGTTGACTACCCCTTCGGAGTGAAGCTGCGAAAAGTGGCGGACAAGCTGGAAGCCATGAAAGCC
AAGACAGGATGGTGCATCCACGATGTCCAGTTCATGAACACGATGGTCAAGCACGATATCCGTCATGGGGAGAGT
CGGGTGGCGCTAATTGACTTCGAGGTTGTGTTCTGGAACTACCGAGCCTTCGACATTGGCGGCCACTTTATGCAG
AAGATGTTCAAGTGGTTTGACGCCGAGAGCAAGATTGCCCGCTGCAACAGGTATACGGACGCGGAGAAGCGGCAC
TTCTGCGACGCCTACGCCCGCCGATGGAACGCCTTGACCGGGGACGCCGACTCGGGCGACCAGGTCTTCGTGGAG
GCCGAGTACGGGTACCTGCTGGCCATCGCCTTTGATGTGCATAACATGCTGAGCTTCATGTGTGAAGAGAACGGC
ACGGACCCGCTAGACCTGCTCGGTCTTAACAAGCTGTTCGCCGAGTTTGTAGAGCAGTACGAGAGGCTAGGGCTC
GAGACCTCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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