Protein ID | Ophio5|7672 |
Gene name | |
Location | scaffold_769:3723..6539 |
Strand | - |
Gene length (bp) | 2816 |
Transcript length (bp) | 2610 |
Coding sequence length (bp) | 2607 |
Protein length (aa) | 869 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00026 | Asp | Eukaryotic aspartyl protease | 2.8E-08 | 47 | 400 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 21 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 445 | 467 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|7672 MRSTPSVVAVAAALAAASHALDPAPVSLQASDWLGIDGNWSTVSFLLGSDSELVNVLISTTLSEFWAIGSGGCAA NDPRCSNARGGLYSPTKSKHWNPMGLWQLGLQYFGYNDNGEYGLDAVNAYSPITNIAFGMSNVLMSAINTTSPYL GLFGLGIQQGRFGDLVADSPITQAVKTFGWIPSYSYGYTAGAHYRNTVVSATLGGYDAARFVQHDTAFTLTQGES IPRTLVRSIQLTAKDADDRPDSWTSSNKILSNWSTSFTAMIDSSTPYLWLPDPICNRIASALNLTYNNTFDLYTL SDDLYREYSADNSLAFTFSLTSFDNHDNFGSPLEVAGLVNITVPIRAFVSYLEYPFARGAIQYGDPAVPYFTLRR SQNDSFILGRTFLQESYLITKFDEALYSIHQALFPANPVSDANLVPIRQPKNSPYPPPPTPKSNDELTPAQMIGI AVGAVLLCVVILAAWYYCRRRSRSRHGEGKKTEDEDHNDSASTLAPDSPKTPVSKILSKIGCRKQSLSRRAAADS GNAGRLTYPVEQMPVEAPDCQVFELAASVSPIELDAGSDSQSIEETELGTHDSQQMSSYELARLKIERQLRGPVP EYTPPADGTVMTEGKTAPPELSTSNPTREAMTDDHLSPASPARSATGGWVSSHPVTSEPSPVSPRADCDHRLTTL PSPVTLCVHTRSGPSDVGSHSDHVSVRTSRSHAENSTTQASVRDSSIAHHRITIDPSKVVCLGPLPENLHIERHH MMTRLVDADGRGVSLALFNAVTVPSEGSLGSNYTEEEDRMVEELTRHASHSQTRSSSSHRRPSSSRDGDERASLP CHAEESPPQEPRDKPESKAANIDPGRDLVHVPQLADKRYSWEDQ |
Coding | >Ophio5|7672 ATGCGCTCCACGCCGTCCGTCGTCGCCGTCGCCGCCGCCCTCGCTGCCGCCTCTCATGCTCTGGATCCCGCGCCT GTCTCCCTGCAGGCCAGTGACTGGCTGGGCATAGACGGCAACTGGTCCACCGTTTCTTTCCTCCTGGGCTCCGAC TCGGAGCTCGTCAACGTCCTCATCAGCACAACGCTTTCCGAGTTCTGGGCCATTGGGTCGGGAGGATGCGCTGCC AACGATCCCCGTTGCAGTAATGCCCGCGGAGGATTATACAGCCCGACAAAGTCCAAACATTGGAACCCCATGGGT CTGTGGCAGCTCGGGCTTCAATACTTCGGCTACAACGACAACGGCGAATATGGCCTCGACGCCGTCAACGCTTAC AGTCCCATCACCAACATCGCCTTTGGCATGTCCAATGTCCTCATGTCCGCCATCAACACCACCAGCCCCTATCTA GGCCTGTTCGGTCTGGGTATTCAGCAGGGCCGGTTTGGGGACCTCGTTGCAGATTCTCCCATCACCCAGGCCGTC AAGACGTTCGGCTGGATCCCCAGTTACAGCTACGGCTACACTGCTGGCGCCCACTACCGCAATACCGTGGTATCG GCAACCCTTGGCGGCTATGACGCGGCCAGATTTGTCCAGCACGACACCGCCTTCACCCTGACTCAGGGCGAGAGC ATCCCCCGTACGCTCGTCCGCAGTATTCAGCTCACCGCCAAGGACGCCGACGACCGACCAGACTCCTGGACCTCG TCCAACAAGATACTGTCCAACTGGAGCACTTCTTTTACCGCCATGATCGACAGCTCGACCCCCTATCTCTGGCTG CCCGACCCCATCTGCAATCGGATTGCCTCGGCCCTGAACTTGACCTACAACAACACCTTCGATCTCTACACCCTG TCCGACGACCTCTACCGCGAGTACTCGGCCGACAACTCCCTCGCCTTCACCTTTAGCCTGACGAGCTTCGATAAC CACGACAACTTTGGCTCGCCGCTCGAGGTCGCGGGGCTCGTCAACATCACCGTGCCTATCCGGGCCTTTGTCAGC TATCTCGAGTATCCCTTTGCCCGCGGGGCCATCCAGTACGGCGACCCGGCGGTGCCCTACTTTACGCTGAGGAGG TCGCAGAACGACAGCTTCATCCTCGGGAGGACCTTTCTGCAGGAGTCGTACCTCATCACAAAGTTCGACGAGGCC CTCTACTCCATCCACCAGGCCCTCTTCCCCGCGAATCCCGTATCCGACGCCAACCTCGTCCCCATCAGGCAACCC AAGAACAGTCCTTACCCGCCGCCGCCGACACCCAAATCCAACGATGAGCTCACCCCGGCGCAGATGATCGGAATC GCCGTCGGCGCCGTCTTGCTCTGCGTCGTCATCTTGGCTGCCTGGTACTACTGCCGCAGGAGATCACGGTCACGT CACGGCGAGGGCAAGAAGACGGAAGACGAAGACCACAACGACTCGGCCTCGACCCTCGCCCCCGACTCGCCCAAG ACGCCCGTGTCCAAGATACTGTCCAAGATAGGGTGCCGAAAGCAGTCCCTGTCACGGCGAGCCGCAGCCGACTCG GGCAATGCCGGCCGACTCACATATCCGGTGGAGCAGATGCCCGTCGAAGCGCCCGACTGCCAGGTCTTTGAGCTG GCCGCCTCGGTTTCTCCCATCGAGCTCGACGCCGGCAGCGACAGCCAATCGATCGAAGAGACGGAGCTGGGCACC CACGACTCCCAGCAGATGAGCTCCTATGAGCTGGCGCGGTTGAAGATTGAGAGGCAGCTACGTGGTCCGGTGCCG GAGTACACGCCACCGGCCGACGGCACCGTCATGACGGAGGGCAAGACGGCGCCGCCGGAACTGTCCACGTCGAAC CCGACCCGAGAGGCCATGACCGATGACCACCTGTCGCCGGCGTCACCGGCCCGGTCCGCGACCGGAGGTTGGGTC TCGAGTCACCCGGTCACGTCGGAACCGTCGCCCGTCTCGCCCCGGGCGGATTGCGATCACCGCCTCACGACGCTG CCGTCTCCCGTGACGTTGTGCGTGCACACCAGGTCCGGGCCCTCCGATGTGGGAAGTCATAGCGACCACGTCTCG GTGCGGACAAGTCGATCCCATGCCGAAAACTCAACGACGCAGGCGTCCGTCAGGGACTCGTCGATCGCTCACCAC CGCATCACCATCGACCCGTCCAAGGTGGTGTGCCTCGGCCCGCTGCCGGAAAACCTCCACATCGAGCGACATCAC ATGATGACGCGCCTCGTCGACGCGGACGGACGGGGCGTCTCGCTAGCCTTGTTCAACGCCGTCACCGTACCTTCG GAGGGTAGCCTGGGTAGCAACTACACGGAAGAAGAGGATCGGATGGTGGAGGAGCTGACGCGGCACGCGAGCCAC TCGCAGACCAGGTCGAGCTCTTCCCACCGGCGACCCTCGTCCAGCAGGGACGGAGACGAACGCGCGTCGCTGCCG TGCCACGCGGAGGAATCACCACCACAGGAGCCCCGTGACAAGCCGGAGTCCAAGGCTGCAAACATCGACCCCGGC AGGGATCTGGTCCATGTGCCGCAGCTGGCGGATAAGCGCTACAGCTGGGAGGATCAA |
Transcript | >Ophio5|7672 ATGCGCTCCACGCCGTCCGTCGTCGCCGTCGCCGCCGCCCTCGCTGCCGCCTCTCATGCTCTGGATCCCGCGCCT GTCTCCCTGCAGGCCAGTGACTGGCTGGGCATAGACGGCAACTGGTCCACCGTTTCTTTCCTCCTGGGCTCCGAC TCGGAGCTCGTCAACGTCCTCATCAGCACAACGCTTTCCGAGTTCTGGGCCATTGGGTCGGGAGGATGCGCTGCC AACGATCCCCGTTGCAGTAATGCCCGCGGAGGATTATACAGCCCGACAAAGTCCAAACATTGGAACCCCATGGGT CTGTGGCAGCTCGGGCTTCAATACTTCGGCTACAACGACAACGGCGAATATGGCCTCGACGCCGTCAACGCTTAC AGTCCCATCACCAACATCGCCTTTGGCATGTCCAATGTCCTCATGTCCGCCATCAACACCACCAGCCCCTATCTA GGCCTGTTCGGTCTGGGTATTCAGCAGGGCCGGTTTGGGGACCTCGTTGCAGATTCTCCCATCACCCAGGCCGTC AAGACGTTCGGCTGGATCCCCAGTTACAGCTACGGCTACACTGCTGGCGCCCACTACCGCAATACCGTGGTATCG GCAACCCTTGGCGGCTATGACGCGGCCAGATTTGTCCAGCACGACACCGCCTTCACCCTGACTCAGGGCGAGAGC ATCCCCCGTACGCTCGTCCGCAGTATTCAGCTCACCGCCAAGGACGCCGACGACCGACCAGACTCCTGGACCTCG TCCAACAAGATACTGTCCAACTGGAGCACTTCTTTTACCGCCATGATCGACAGCTCGACCCCCTATCTCTGGCTG CCCGACCCCATCTGCAATCGGATTGCCTCGGCCCTGAACTTGACCTACAACAACACCTTCGATCTCTACACCCTG TCCGACGACCTCTACCGCGAGTACTCGGCCGACAACTCCCTCGCCTTCACCTTTAGCCTGACGAGCTTCGATAAC CACGACAACTTTGGCTCGCCGCTCGAGGTCGCGGGGCTCGTCAACATCACCGTGCCTATCCGGGCCTTTGTCAGC TATCTCGAGTATCCCTTTGCCCGCGGGGCCATCCAGTACGGCGACCCGGCGGTGCCCTACTTTACGCTGAGGAGG TCGCAGAACGACAGCTTCATCCTCGGGAGGACCTTTCTGCAGGAGTCGTACCTCATCACAAAGTTCGACGAGGCC CTCTACTCCATCCACCAGGCCCTCTTCCCCGCGAATCCCGTATCCGACGCCAACCTCGTCCCCATCAGGCAACCC AAGAACAGTCCTTACCCGCCGCCGCCGACACCCAAATCCAACGATGAGCTCACCCCGGCGCAGATGATCGGAATC GCCGTCGGCGCCGTCTTGCTCTGCGTCGTCATCTTGGCTGCCTGGTACTACTGCCGCAGGAGATCACGGTCACGT CACGGCGAGGGCAAGAAGACGGAAGACGAAGACCACAACGACTCGGCCTCGACCCTCGCCCCCGACTCGCCCAAG ACGCCCGTGTCCAAGATACTGTCCAAGATAGGGTGCCGAAAGCAGTCCCTGTCACGGCGAGCCGCAGCCGACTCG GGCAATGCCGGCCGACTCACATATCCGGTGGAGCAGATGCCCGTCGAAGCGCCCGACTGCCAGGTCTTTGAGCTG GCCGCCTCGGTTTCTCCCATCGAGCTCGACGCCGGCAGCGACAGCCAATCGATCGAAGAGACGGAGCTGGGCACC CACGACTCCCAGCAGATGAGCTCCTATGAGCTGGCGCGGTTGAAGATTGAGAGGCAGCTACGTGGTCCGGTGCCG GAGTACACGCCACCGGCCGACGGCACCGTCATGACGGAGGGCAAGACGGCGCCGCCGGAACTGTCCACGTCGAAC CCGACCCGAGAGGCCATGACCGATGACCACCTGTCGCCGGCGTCACCGGCCCGGTCCGCGACCGGAGGTTGGGTC TCGAGTCACCCGGTCACGTCGGAACCGTCGCCCGTCTCGCCCCGGGCGGATTGCGATCACCGCCTCACGACGCTG CCGTCTCCCGTGACGTTGTGCGTGCACACCAGGTCCGGGCCCTCCGATGTGGGAAGTCATAGCGACCACGTCTCG GTGCGGACAAGTCGATCCCATGCCGAAAACTCAACGACGCAGGCGTCCGTCAGGGACTCGTCGATCGCTCACCAC CGCATCACCATCGACCCGTCCAAGGTGGTGTGCCTCGGCCCGCTGCCGGAAAACCTCCACATCGAGCGACATCAC ATGATGACGCGCCTCGTCGACGCGGACGGACGGGGCGTCTCGCTAGCCTTGTTCAACGCCGTCACCGTACCTTCG GAGGGTAGCCTGGGTAGCAACTACACGGAAGAAGAGGATCGGATGGTGGAGGAGCTGACGCGGCACGCGAGCCAC TCGCAGACCAGGTCGAGCTCTTCCCACCGGCGACCCTCGTCCAGCAGGGACGGAGACGAACGCGCGTCGCTGCCG TGCCACGCGGAGGAATCACCACCACAGGAGCCCCGTGACAAGCCGGAGTCCAAGGCTGCAAACATCGACCCCGGC AGGGATCTGGTCCATGTGCCGCAGCTGGCGGATAAGCGCTACAGCTGGGAGGATCAATAG |
Gene | >Ophio5|7672 ATGCGCTCCACGCCGTCCGTCGTCGCCGTCGCCGCCGCCCTCGCTGCCGCCTCTCATGCTCTGGATCCCGCGCCT GTCTCCCTGCAGGCCAGTGACTGGTTCGTCTATCTGCCTTATCTTCAAGTCTTTTGACTGACATACTGCAGGCTG GGCATAGACGGCAACTGGTCCACCGTTTCTTTCCTCCTGGGCTCCGACTCGGAGCTCGTCAACGTCCTCATCAGC ACAACGCTTTCCGAGTTCTGGGCCATTGGGTCGGGAGGATGCGCTGCCAGTACGTTACGTCTGGTCCTCGTCGCC ATTCTCTCTTTCCCAGCTTCTACCGTCTCCTTGACATCCCCTTCGGATCAACACTGACTGTCTTGTACGACATAG ACGATCCCCGTTGCAGTAATGCCCGCGGAGGATTATACAGCCCGACAAAGTCCAAACATTGGAACCCCATGGGTC TGTGGCAGCTCGGGCTTCAATACTTCGGCTACAACGACAACGGCGAATATGGCCTCGACGCCGTCAACGCTTACA GTCCCATCACCAACATCGCCTTTGGCATGTCCAATGTCCTCATGTCCGCCATCAACACCACCAGCCCCTATCTAG GCCTGTTCGGTCTGGGTATTCAGCAGGGCCGGTTTGGGGACCTCGTTGCAGATTCTCCCATCACCCAGGCCGTCA AGACGTTCGGCTGGATCCCCAGTTACAGCTACGGCTACACTGCTGGCGCCCACTACCGTATGTTTCCCTCCCGTC TCTGACCCTGCTCGCCGGCTGACTGGATGGATGTACAAGGCAATACCGTGGTATCGGCAACCCTTGGCGGCTATG ACGCGGCCAGATTTGTCCAGCACGACACCGCCTTCACCCTGACTCAGGGCGAGAGCATCCCCCGTACGCTCGTCC GCAGTATTCAGCTCACCGCCAAGGACGCCGACGACCGACCAGACTCCTGGACCTCGTCCAACAAGATACTGTCCA ACTGGAGCACTTCTTTTACCGCCATGATCGACAGCTCGACCCCCTATCTCTGGCTGCCCGACCCCATCTGCAATC GGATTGCCTCGGCCCTGAACTTGACCTACAACAACACCTTCGATCTCTACACCCTGTCCGACGACCTCTACCGCG AGTACTCGGCCGACAACTCCCTCGCCTTCACCTTTAGCCTGACGAGCTTCGATAACCACGACAACTTTGGCTCGC CGCTCGAGGTCGCGGGGCTCGTCAACATCACCGTGCCTATCCGGGCCTTTGTCAGCTATCTCGAGTATCCCTTTG CCCGCGGGGCCATCCAGTACGGCGACCCGGCGGTGCCCTACTTTACGCTGAGGAGGTCGCAGAACGACAGCTTCA TCCTCGGGAGGACCTTTCTGCAGGAGTCGTACCTCATCACAAAGTTCGACGAGGCCCTCTACTCCATCCACCAGG CCCTCTTCCCCGCGAATCCCGTATCCGACGCCAACCTCGTCCCCATCAGGCAACCCAAGAACAGTCCTTACCCGC CGCCGCCGACACCCAAATCCAACGATGAGCTCACCCCGGCGCAGATGATCGGAATCGCCGTCGGCGCCGTCTTGC TCTGCGTCGTCATCTTGGCTGCCTGGTACTACTGCCGCAGGAGATCACGGTCACGTCACGGCGAGGGCAAGAAGA CGGAAGACGAAGACCACAACGACTCGGCCTCGACCCTCGCCCCCGACTCGCCCAAGACGCCCGTGTCCAAGATAC TGTCCAAGATAGGGTGCCGAAAGCAGTCCCTGTCACGGCGAGCCGCAGCCGACTCGGGCAATGCCGGCCGACTCA CATATCCGGTGGAGCAGATGCCCGTCGAAGCGCCCGACTGCCAGGTCTTTGAGCTGGCCGCCTCGGTTTCTCCCA TCGAGCTCGACGCCGGCAGCGACAGCCAATCGATCGAAGAGACGGAGCTGGGCACCCACGACTCCCAGCAGATGA GCTCCTATGAGCTGGCGCGGTTGAAGATTGAGAGGCAGCTACGTGGTCCGGTGCCGGAGTACACGCCACCGGCCG ACGGCACCGTCATGACGGAGGGCAAGACGGCGCCGCCGGAACTGTCCACGTCGAACCCGACCCGAGAGGCCATGA CCGATGACCACCTGTCGCCGGCGTCACCGGCCCGGTCCGCGACCGGAGGTTGGGTCTCGAGTCACCCGGTCACGT CGGAACCGTCGCCCGTCTCGCCCCGGGCGGATTGCGATCACCGCCTCACGACGCTGCCGTCTCCCGTGACGTTGT GCGTGCACACCAGGTCCGGGCCCTCCGATGTGGGAAGTCATAGCGACCACGTCTCGGTGCGGACAAGTCGATCCC ATGCCGAAAACTCAACGACGCAGGCGTCCGTCAGGGACTCGTCGATCGCTCACCACCGCATCACCATCGACCCGT CCAAGGTGGTGTGCCTCGGCCCGCTGCCGGAAAACCTCCACATCGAGCGACATCACATGATGACGCGCCTCGTCG ACGCGGACGGACGGGGCGTCTCGCTAGCCTTGTTCAACGCCGTCACCGTACCTTCGGAGGGTAGCCTGGGTAGCA ACTACACGGAAGAAGAGGATCGGATGGTGGAGGAGCTGACGCGGCACGCGAGCCACTCGCAGACCAGGTCGAGCT CTTCCCACCGGCGACCCTCGTCCAGCAGGGACGGAGACGAACGCGCGTCGCTGCCGTGCCACGCGGAGGAATCAC CACCACAGGAGCCCCGTGACAAGCCGGAGTCCAAGGCTGCAAACATCGACCCCGGCAGGGATCTGGTCCATGTGC CGCAGCTGGCGGATAAGCGCTACAGCTGGGAGGATCAATAG |