Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7657
Gene name
Locationscaffold_762:3567..4626
Strand-
Gene length (bp)1059
Transcript length (bp)807
Coding sequence length (bp)804
Protein length (aa) 268

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02656 DUF202 Domain of unknown function (DUF202) 3.1E-21 139 217

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

Domain # Start End Length
1 149 171 22
2 193 210 17
3 231 253 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7657
MAGSEPLTAPARLEQVDDDDMRAAPTSARPPSRAVSISQSTSSRIDDILQTGRARAESRGQHDDWMPVASRGSAP
SVVALQPPKSSSVYRRRTHDHRTADPVLAEVLGDEDGGVDGPWWREMLGRFQSVELENHGSVARDHLALERTFLA
WLRTSLAFASIGVAVTQLFRLNTSLSDVGEGVDSLTLRRMGKPLGATFLAISILTLLLGFRRYFHGQEWVMKGKF
PASRGTIVVVAILALAIMLVSLVVVIVIQPTEERAREAVRLDL
Coding >Ophio5|7657
ATGGCCGGGTCCGAGCCTCTCACGGCTCCGGCGCGCCTCGAGCAAGTCGACGATGACGACATGCGGGCCGCACCG
ACCAGCGCCAGACCCCCGAGCCGGGCCGTTTCGATTTCGCAGTCGACGAGCTCGCGCATCGACGACATCTTGCAG
ACCGGACGCGCCCGGGCCGAGAGTCGCGGACAGCACGACGATTGGATGCCCGTGGCGTCGCGCGGTTCCGCCCCG
AGCGTCGTGGCGCTGCAGCCGCCCAAGTCGTCTTCCGTTTATCGGCGCCGCACGCACGACCATCGGACGGCTGAT
CCGGTGCTGGCGGAAGTCCTGGGGGATGAAGACGGCGGCGTCGATGGACCTTGGTGGAGGGAGATGCTCGGCAGG
TTTCAGTCGGTGGAGCTCGAGAATCACGGCAGCGTGGCTAGAGATCACCTGGCACTCGAACGCACCTTTCTCGCC
TGGCTGCGGACCTCGCTCGCGTTCGCGTCCATCGGCGTCGCCGTCACGCAACTATTTCGGCTCAACACGTCTCTC
TCCGACGTGGGCGAGGGCGTCGACTCGTTGACGCTGCGACGGATGGGCAAGCCTCTGGGGGCGACGTTCCTGGCC
ATCAGCATACTGACGCTGTTGCTGGGCTTCCGAAGATACTTCCACGGGCAGGAATGGGTTATGAAGGGCAAGTTT
CCGGCGAGTAGGGGAACGATTGTCGTTGTGGCCATTCTGGCGCTGGCCATCATGTTGGTGTCGCTGGTGGTGGTG
ATTGTCATTCAGCCGACGGAGGAGCGGGCGAGGGAGGCCGTGAGGTTGGATCTG
Transcript >Ophio5|7657
ATGGCCGGGTCCGAGCCTCTCACGGCTCCGGCGCGCCTCGAGCAAGTCGACGATGACGACATGCGGGCCGCACCG
ACCAGCGCCAGACCCCCGAGCCGGGCCGTTTCGATTTCGCAGTCGACGAGCTCGCGCATCGACGACATCTTGCAG
ACCGGACGCGCCCGGGCCGAGAGTCGCGGACAGCACGACGATTGGATGCCCGTGGCGTCGCGCGGTTCCGCCCCG
AGCGTCGTGGCGCTGCAGCCGCCCAAGTCGTCTTCCGTTTATCGGCGCCGCACGCACGACCATCGGACGGCTGAT
CCGGTGCTGGCGGAAGTCCTGGGGGATGAAGACGGCGGCGTCGATGGACCTTGGTGGAGGGAGATGCTCGGCAGG
TTTCAGTCGGTGGAGCTCGAGAATCACGGCAGCGTGGCTAGAGATCACCTGGCACTCGAACGCACCTTTCTCGCC
TGGCTGCGGACCTCGCTCGCGTTCGCGTCCATCGGCGTCGCCGTCACGCAACTATTTCGGCTCAACACGTCTCTC
TCCGACGTGGGCGAGGGCGTCGACTCGTTGACGCTGCGACGGATGGGCAAGCCTCTGGGGGCGACGTTCCTGGCC
ATCAGCATACTGACGCTGTTGCTGGGCTTCCGAAGATACTTCCACGGGCAGGAATGGGTTATGAAGGGCAAGTTT
CCGGCGAGTAGGGGAACGATTGTCGTTGTGGCCATTCTGGCGCTGGCCATCATGTTGGTGTCGCTGGTGGTGGTG
ATTGTCATTCAGCCGACGGAGGAGCGGGCGAGGGAGGCCGTGAGGTTGGATCTGTAG
Gene >Ophio5|7657
ATGGCCGGGTCCGAGCCTCTCACGGCTCCGGCGCGCCTCGAGCAAGTCGACGATGACGACATGCGGGCCGCACCG
ACCAGCGCCAGACCCCCGAGCCGGGCCGTTTCGATTTCGCAGTCGACGAGCTCGCGCATCGACGACATCTTGCAG
GTGCTGTAACGTACACGTCTAGATGCCTACCTACCTACCTATCTACCTACCTACCTACCTACCTAGGTAGGAAGA
GAGGTAGGTAGGTAGGTAGGTAGGTAGGTACATGATCGGACAGAGTGGGCTAACACACACGACGGCGCCGCCAGA
CCGGACGCGCCCGGGCCGAGAGTCGCGGACAGCACGACGATTGGATGCCCGTGGCGTCGCGCGGTTCCGCCCCGA
GCGTCGTGGCGCTGCAGCCGCCCAAGTCGTCTTCCGTTTATCGGCGCCGCACGCACGACCATCGGACGGCTGATC
CGGTGCTGGCGGAAGTCCTGGGGGATGAAGACGGCGGCGTCGATGGACCTTGGTGGAGGGAGATGCTCGGCAGGT
TTCAGTCGGTGGAGCTCGAGAATCACGGCAGCGTGGCTAGAGATCACCTGGCACTCGGTGCGAATACCTACCTAC
CTACCTACCTACCTACCTACCTAAGGAAATCATACCTACCTACCTAGCTACCGTACACGCGCTGACCCGGCCGAC
CGATTGTCAGAACGCACCTTTCTCGCCTGGCTGCGGACCTCGCTCGCGTTCGCGTCCATCGGCGTCGCCGTCACG
CAACTATTTCGGCTCAACACGTCTCTCTCCGACGTGGGCGAGGGCGTCGACTCGTTGACGCTGCGACGGATGGGC
AAGCCTCTGGGGGCGACGTTCCTGGCCATCAGCATACTGACGCTGTTGCTGGGCTTCCGAAGATACTTCCACGGG
CAGGAATGGGTTATGAAGGGCAAGTTTCCGGCGAGTAGGGGAACGATTGTCGTTGTGGCCATTCTGGCGCTGGCC
ATCATGTTGGTGTCGCTGGTGGTGGTGATTGTCATTCAGCCGACGGAGGAGCGGGCGAGGGAGGCCGTGAGGTTG
GATCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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