Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7655
Gene name
Locationscaffold_761:5163..7000
Strand+
Gene length (bp)1837
Transcript length (bp)1659
Coding sequence length (bp)1656
Protein length (aa) 552

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11951 Fungal_trans_2 Fungal specific transcription factor domain 5.4E-25 168 545
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 4.7E-05 7 36

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P78704|ACR2_NEUCR Acriflavine sensitivity control protein acr-2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=acr-2 PE=3 SV=3 5 552 3.0E-66

GO

GO Term Description Terminal node
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008150 biological_process No
GO:0051252 regulation of RNA metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0019222 regulation of metabolic process No
GO:0050794 regulation of cellular process No
GO:0140110 transcription regulator activity No
GO:0031323 regulation of cellular metabolic process No
GO:0065007 biological regulation No
GO:0046872 metal ion binding No
GO:0010468 regulation of gene expression No
GO:0043167 ion binding No
GO:0043169 cation binding No
GO:0003674 molecular_function No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0005488 binding No
GO:0080090 regulation of primary metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0050789 regulation of biological process No
GO:0003700 DNA-binding transcription factor activity No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:2001141 regulation of RNA biosynthetic process No
GO:0046914 transition metal ion binding No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0031326 regulation of cellular biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7655
MPTITKPCHNCRRRRLRCDRSWPSCHKCAVSGQECLGYGRVFVWTQTIDPHGNLKPPAAASSSSSSSSVSSSSTS
SVSSSSPWCPAPTLNHRKLPPKHAMQQPFRPPPTPETDHPSQLSPPPRARDAPQPGRDDSSGPAPDECPRRVLIG
NPRDPVFQDLDWNSRYYLCHFADRHPLLLHILIATSALHWVNISRPLISIHTGLADLGGRLVQLRATDLVLRKAL
VDAFTAKQKAICHLRGVLDALDPAVSEVALAAVHFFVKFDLIDLERHEDRAWRTHLEGASSILAFLSPGRVASSS
SRLLRDTVVADCFIYHILGSTLASGALAARIARYAFELLPVMKRVEANSYLSCPAEILQVILAASQLSYETRCTD
WSLSAADKALKLVCQALAFDIPGWAARLRQQSAEVPDMESRVHVASAHRSAACLYILQVMPPVRATPPVDAELLV
SDILGHLAQIGNDDPYFKATSWPAFIAGVETREAEKRTWTLKRLLAIWGICSWGYIFAAIEMLNATWAMQDRADG
GEDGAALRSDVNWLQGLKDMGFDCLIV
Coding >Ophio5|7655
ATGCCCACCATCACCAAGCCGTGCCACAACTGCCGCCGCCGCCGCTTGCGATGCGATCGCTCGTGGCCATCCTGC
CACAAATGCGCCGTTTCGGGGCAGGAATGTCTCGGCTACGGGCGCGTCTTTGTCTGGACCCAGACCATTGACCCC
CACGGCAACTTGAAGCCACCCGCCGCGGCCTCGTCGTCATCGTCGTCTTCTTCCGTTTCTTCTTCCTCGACCTCC
TCTGTCTCTTCCTCTTCGCCCTGGTGCCCTGCGCCGACCCTGAACCATCGCAAGCTCCCTCCCAAGCATGCTATG
CAGCAGCCCTTTCGCCCGCCGCCGACCCCCGAGACCGATCACCCGAGTCAGCTGTCTCCACCACCCCGGGCTCGC
GACGCCCCACAGCCCGGCCGTGACGACAGTTCCGGGCCCGCCCCGGATGAATGCCCTCGCCGCGTCTTGATTGGC
AACCCGAGAGATCCCGTTTTCCAGGATCTCGACTGGAACTCGCGATACTATCTCTGCCACTTCGCCGATCGTCAT
CCCTTGCTCCTCCATATCCTCATCGCAACCTCGGCTCTTCACTGGGTCAACATCTCACGCCCCCTCATCTCCATC
CATACAGGACTGGCTGATCTCGGCGGCCGCCTCGTCCAGCTGCGCGCCACGGACCTCGTGTTGCGAAAGGCGCTG
GTAGATGCCTTCACGGCCAAGCAAAAGGCCATTTGCCACCTGCGCGGGGTTCTCGACGCGCTGGACCCGGCTGTC
AGCGAAGTAGCCCTTGCCGCCGTCCACTTCTTTGTCAAATTCGACCTGATCGACCTGGAGAGGCACGAGGACAGA
GCCTGGCGGACGCACCTCGAGGGCGCCAGCAGCATCCTGGCCTTTCTTTCTCCGGGCCGCGTGGCGAGCTCGTCG
AGCAGGCTGCTGCGGGACACTGTCGTGGCCGACTGCTTCATATACCACATCCTGGGCTCCACGCTGGCTTCGGGG
GCGCTGGCGGCACGAATCGCCCGCTACGCCTTTGAGCTGCTGCCCGTCATGAAGCGGGTCGAGGCCAACAGCTAT
CTGTCGTGTCCTGCCGAGATCCTGCAGGTGATTCTGGCGGCGTCGCAGCTGTCGTACGAGACGCGCTGCACCGAC
TGGTCGCTTTCGGCGGCCGACAAGGCCCTGAAACTGGTCTGTCAGGCGCTGGCCTTTGACATACCCGGCTGGGCC
GCGCGGCTCCGGCAGCAGTCGGCCGAGGTGCCGGACATGGAGAGCCGGGTGCACGTGGCCTCGGCACATCGGTCG
GCGGCCTGCCTGTATATCCTACAGGTGATGCCGCCGGTGCGGGCGACGCCGCCCGTGGACGCCGAGCTGCTCGTG
TCTGATATTCTAGGCCACCTGGCGCAGATTGGCAACGACGACCCGTACTTCAAGGCCACGTCCTGGCCGGCCTTT
ATCGCCGGCGTCGAGACACGCGAGGCCGAGAAGCGCACATGGACGCTGAAGCGACTGCTGGCCATTTGGGGTATC
TGCTCGTGGGGCTACATCTTCGCCGCCATTGAGATGCTCAACGCGACGTGGGCCATGCAGGATCGCGCTGATGGG
GGCGAGGACGGGGCCGCGCTCCGGTCGGACGTCAACTGGCTTCAGGGTCTCAAGGACATGGGATTCGACTGCCTG
ATAGTG
Transcript >Ophio5|7655
ATGCCCACCATCACCAAGCCGTGCCACAACTGCCGCCGCCGCCGCTTGCGATGCGATCGCTCGTGGCCATCCTGC
CACAAATGCGCCGTTTCGGGGCAGGAATGTCTCGGCTACGGGCGCGTCTTTGTCTGGACCCAGACCATTGACCCC
CACGGCAACTTGAAGCCACCCGCCGCGGCCTCGTCGTCATCGTCGTCTTCTTCCGTTTCTTCTTCCTCGACCTCC
TCTGTCTCTTCCTCTTCGCCCTGGTGCCCTGCGCCGACCCTGAACCATCGCAAGCTCCCTCCCAAGCATGCTATG
CAGCAGCCCTTTCGCCCGCCGCCGACCCCCGAGACCGATCACCCGAGTCAGCTGTCTCCACCACCCCGGGCTCGC
GACGCCCCACAGCCCGGCCGTGACGACAGTTCCGGGCCCGCCCCGGATGAATGCCCTCGCCGCGTCTTGATTGGC
AACCCGAGAGATCCCGTTTTCCAGGATCTCGACTGGAACTCGCGATACTATCTCTGCCACTTCGCCGATCGTCAT
CCCTTGCTCCTCCATATCCTCATCGCAACCTCGGCTCTTCACTGGGTCAACATCTCACGCCCCCTCATCTCCATC
CATACAGGACTGGCTGATCTCGGCGGCCGCCTCGTCCAGCTGCGCGCCACGGACCTCGTGTTGCGAAAGGCGCTG
GTAGATGCCTTCACGGCCAAGCAAAAGGCCATTTGCCACCTGCGCGGGGTTCTCGACGCGCTGGACCCGGCTGTC
AGCGAAGTAGCCCTTGCCGCCGTCCACTTCTTTGTCAAATTCGACCTGATCGACCTGGAGAGGCACGAGGACAGA
GCCTGGCGGACGCACCTCGAGGGCGCCAGCAGCATCCTGGCCTTTCTTTCTCCGGGCCGCGTGGCGAGCTCGTCG
AGCAGGCTGCTGCGGGACACTGTCGTGGCCGACTGCTTCATATACCACATCCTGGGCTCCACGCTGGCTTCGGGG
GCGCTGGCGGCACGAATCGCCCGCTACGCCTTTGAGCTGCTGCCCGTCATGAAGCGGGTCGAGGCCAACAGCTAT
CTGTCGTGTCCTGCCGAGATCCTGCAGGTGATTCTGGCGGCGTCGCAGCTGTCGTACGAGACGCGCTGCACCGAC
TGGTCGCTTTCGGCGGCCGACAAGGCCCTGAAACTGGTCTGTCAGGCGCTGGCCTTTGACATACCCGGCTGGGCC
GCGCGGCTCCGGCAGCAGTCGGCCGAGGTGCCGGACATGGAGAGCCGGGTGCACGTGGCCTCGGCACATCGGTCG
GCGGCCTGCCTGTATATCCTACAGGTGATGCCGCCGGTGCGGGCGACGCCGCCCGTGGACGCCGAGCTGCTCGTG
TCTGATATTCTAGGCCACCTGGCGCAGATTGGCAACGACGACCCGTACTTCAAGGCCACGTCCTGGCCGGCCTTT
ATCGCCGGCGTCGAGACACGCGAGGCCGAGAAGCGCACATGGACGCTGAAGCGACTGCTGGCCATTTGGGGTATC
TGCTCGTGGGGCTACATCTTCGCCGCCATTGAGATGCTCAACGCGACGTGGGCCATGCAGGATCGCGCTGATGGG
GGCGAGGACGGGGCCGCGCTCCGGTCGGACGTCAACTGGCTTCAGGGTCTCAAGGACATGGGATTCGACTGCCTG
ATAGTGTGA
Gene >Ophio5|7655
ATGCCCACCATCACCAAGCCGTGCCACAACTGCCGCCGCCGCCGCTTGCGATGCGATCGCTCGTGGCCATCCTGC
CACAAATGCGCCGTTTCGGGGCAGGAATGTCTCGGCTACGGGCGCGTCTTTGTCTGGACCCAGACCATTGACCCC
CACGGCAACTTGAAGCCACCCGCCGCGGCCTCGTCGTCATCGTCGTCTTCTTCCGTTTCTTCTTCCTCGACCTCC
TCTGTCTCTTCCTCTTCGCCCTGGTGCCCTGCGCCGACCCTGAACCATCGCAAGCTCCCTCCCAAGCATGCTATG
CAGCAGCCCTTTCGCCCGCCGCCGACCCCCGAGACCGATCACCCGAGTCAGCTGTCTCCACCACCCCGGGCTCGC
GACGCCCCACAGCCCGGCCGTGACGACAGTTCCGGGCCCGCCCCGGATGAATGCCCTCGCCGCGTCTTGATTGGC
AACCCGAGAGATCCCGTTTTCCAGGATCTCGACTGGAACTCGCGATACTATCTCTGCCACTGTGAGTTCCTCCAT
CGTTCCATCGTGGTGTAACACTAATGCAGCCTTGGCCTGCCAGTCGCCGATCGTGTATGCAAAGACCTCGTGGCC
CGTGATGCACCTGGAAGTAACCCTTTCCGCGAGCTGATACCATTGACCAACAAGCATCCCTTGCTCCTCCATATC
CTCATCGCAACCTCGGCTCTTCACTGGGTCAACATCTCACGCCCCCTCATCTCCATCCATACAGGACTGGCTGAT
CTCGGCGGCCGCCTCGTCCAGCTGCGCGCCACGGACCTCGTGTTGCGAAAGGCGCTGGTAGATGCCTTCACGGCC
AAGCAAAAGGCCATTTGCCACCTGCGCGGGGTTCTCGACGCGCTGGACCCGGCTGTCAGCGAAGTAGCCCTTGCC
GCCGTCCACTTCTTTGTCAAATTCGACCTGATCGACCTGGAGAGGCACGAGGACAGAGCCTGGCGGACGCACCTC
GAGGGCGCCAGCAGCATCCTGGCCTTTCTTTCTCCGGGCCGCGTGGCGAGCTCGTCGAGCAGGCTGCTGCGGGAC
ACTGTCGTGGCCGACTGCTTCATGTGAGCCCCTTTTCGGCTGGCTGATGGACTGACTGACGGCCGTCAGATACCA
CATCCTGGGCTCCACGCTGGCTTCGGGGGCGCTGGCGGCACGAATCGCCCGCTACGCCTTTGAGCTGCTGCCCGT
CATGAAGCGGGTCGAGGCCAACAGCTATCTGTCGTGTCCTGCCGAGATCCTGCAGGTGATTCTGGCGGCGTCGCA
GCTGTCGTACGAGACGCGCTGCACCGACTGGTCGCTTTCGGCGGCCGACAAGGCCCTGAAACTGGTCTGTCAGGC
GCTGGCCTTTGACATACCCGGCTGGGCCGCGCGGCTCCGGCAGCAGTCGGCCGAGGTGCCGGACATGGAGAGCCG
GGTGCACGTGGCCTCGGCACATCGGTCGGCGGCCTGCCTGTATATCCTACAGGTGATGCCGCCGGTGCGGGCGAC
GCCGCCCGTGGACGCCGAGCTGCTCGTGTCTGATATTCTAGGCCACCTGGCGCAGATTGGCAACGACGACCCGTA
CTTCAAGGCCACGTCCTGGCCGGCCTTTATCGCCGGCGTCGAGACACGCGAGGCCGAGAAGCGCACATGGACGCT
GAAGCGACTGCTGGCCATTTGGGGTATCTGCTCGTGGGGCTACATCTTCGCCGCCATTGAGATGCTCAACGCGAC
GTGGGCCATGCAGGATCGCGCTGATGGGGGCGAGGACGGGGCCGCGCTCCGGTCGGACGTCAACTGGCTTCAGGG
TCTCAAGGACATGGGATTCGACTGCCTGATAGTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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