© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|7631 |
| Gene name | |
| Location | scaffold_759:6311..6802 |
| Strand | - |
| Gene length (bp) | 491 |
| Transcript length (bp) | 426 |
| Coding sequence length (bp) | 423 |
| Protein length (aa) | 141 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.0925 | 0.0803 | 0.9689 | 0.0369 | 0.0971 | 0.0079 | 0.0833 | 0.0432 | 0.0558 | 0.0116 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 23 | 0.999668 |
| Orthofinder run ID | 4 |
| Orthogroup | 16334 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps kimflemingae | Ophio5|7631 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|7631 MKTTAIVSLLFASLSLALPMGSGKAGDLEARELEARGGGGLEGGVEASGFGPGGAGGFGGPGLGFGGGGGFGRGG GGFGRGGGGFGRGGGVFGRAGVNPDGLGAPILPRDAEVVPRGQGETSSAERQAYLTRDFLLSSTIL |
| Coding | >Ophio5|7631 ATGAAGACTACCGCCATTGTTTCCCTTCTCTTTGCATCCCTCAGCCTCGCACTGCCCATGGGCTCAGGTAAAGCT GGCGACCTCGAAGCCCGAGAACTCGAAGCACGCGGAGGTGGTGGCCTGGAAGGCGGTGTTGAAGCCTCGGGTTTC GGCCCGGGAGGCGCTGGAGGCTTTGGTGGCCCAGGTTTGGGATTTGGAGGAGGTGGAGGCTTCGGACGAGGAGGT GGAGGCTTCGGACGTGGAGGTGGAGGCTTCGGACGTGGAGGTGGAGTCTTCGGCCGTGCTGGTGTCAATCCTGAT GGTCTTGGAGCCCCGATATTGCCCAGAGATGCCGAAGTCGTCCCCCGGGGCCAAGGTGAGACGAGCAGCGCCGAG AGGCAAGCCTACTTGACTCGAGACTTTTTACTGAGCTCAACAATTCTC |
| Transcript | >Ophio5|7631 ATGAAGACTACCGCCATTGTTTCCCTTCTCTTTGCATCCCTCAGCCTCGCACTGCCCATGGGCTCAGGTAAAGCT GGCGACCTCGAAGCCCGAGAACTCGAAGCACGCGGAGGTGGTGGCCTGGAAGGCGGTGTTGAAGCCTCGGGTTTC GGCCCGGGAGGCGCTGGAGGCTTTGGTGGCCCAGGTTTGGGATTTGGAGGAGGTGGAGGCTTCGGACGAGGAGGT GGAGGCTTCGGACGTGGAGGTGGAGGCTTCGGACGTGGAGGTGGAGTCTTCGGCCGTGCTGGTGTCAATCCTGAT GGTCTTGGAGCCCCGATATTGCCCAGAGATGCCGAAGTCGTCCCCCGGGGCCAAGGTGAGACGAGCAGCGCCGAG AGGCAAGCCTACTTGACTCGAGACTTTTTACTGAGCTCAACAATTCTCTAG |
| Gene | >Ophio5|7631 ATGAAGACTACCGCCATTGTTTCCCTTCTCTTTGCATCCCTCAGCCTCGCACTGCCCATGGGCTCAGGTAAAGCT GGCGACCTCGAAGCCCGAGAACTCGAAGCACGCGGAGGTGGTGGCCTGGAAGGCGGTGTTGAAGCCTCGGGTTTC GGCCCGGGAGGCGCTGGAGGCTTTGGTGGCCCAGGTTTGGGATTTGGAGGAGGTGGAGGCTTCGGACGAGGAGGT GGAGGCTTCGGACGTGGAGGTGGAGGCTTCGGACGTGGAGGTGGAGTCTTCGGCCGTGCTGGTGTCAATCCTGAT GGTCTTGGAGGTAAGCGCAGCGGCGAACTGACACACTCGTGGCAGTTGGAGGCATGAGCTGACGGACTTTGTTAG CCCCGATATTGCCCAGAGATGCCGAAGTCGTCCCCCGGGGCCAAGGTGAGACGAGCAGCGCCGAGAGGCAAGCCT ACTTGACTCGAGACTTTTTACTGAGCTCAACAATTCTCTAG |