© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophio5|7608 |
| Gene name | |
| Location | scaffold_753:2226..2961 |
| Strand | - |
| Gene length (bp) | 735 |
| Transcript length (bp) | 735 |
| Coding sequence length (bp) | 732 |
| Protein length (aa) | 244 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03006 | HlyIII | Haemolysin-III related | 2.1E-59 | 2 | 224 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q09910|YAJB_SCHPO | Uncharacterized protein C30D11.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC30D11.11 PE=4 SV=1 | 6 | 233 | 3.0E-52 |
| sp|Q07959|IZH3_YEAST | ADIPOR-like receptor IZH3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IZH3 PE=1 SV=1 | 6 | 233 | 1.0E-31 |
| sp|Q9VCY8|ADRL_DROME | Adiponectin receptor protein OS=Drosophila melanogaster GN=AdipoR PE=1 SV=2 | 1 | 229 | 3.0E-27 |
| sp|Q94177|ADRL_CAEEL | Progestin and adipoQ receptor-like protein 1 OS=Caenorhabditis elegans GN=paqr-1 PE=3 SV=2 | 1 | 243 | 6.0E-27 |
| sp|Q8BQS5|ADR2_MOUSE | Adiponectin receptor protein 2 OS=Mus musculus GN=Adipor2 PE=1 SV=2 | 1 | 230 | 9.0E-27 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q09910|YAJB_SCHPO | Uncharacterized protein C30D11.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC30D11.11 PE=4 SV=1 | 6 | 233 | 3.0E-52 |
| sp|Q07959|IZH3_YEAST | ADIPOR-like receptor IZH3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IZH3 PE=1 SV=1 | 6 | 233 | 1.0E-31 |
| sp|Q9VCY8|ADRL_DROME | Adiponectin receptor protein OS=Drosophila melanogaster GN=AdipoR PE=1 SV=2 | 1 | 229 | 3.0E-27 |
| sp|Q94177|ADRL_CAEEL | Progestin and adipoQ receptor-like protein 1 OS=Caenorhabditis elegans GN=paqr-1 PE=3 SV=2 | 1 | 243 | 6.0E-27 |
| sp|Q8BQS5|ADR2_MOUSE | Adiponectin receptor protein 2 OS=Mus musculus GN=Adipor2 PE=1 SV=2 | 1 | 230 | 9.0E-27 |
| sp|Q86V24|ADR2_HUMAN | Adiponectin receptor protein 2 OS=Homo sapiens GN=ADIPOR2 PE=1 SV=1 | 1 | 230 | 2.0E-26 |
| sp|Q96A54|ADR1_HUMAN | Adiponectin receptor protein 1 OS=Homo sapiens GN=ADIPOR1 PE=1 SV=1 | 1 | 242 | 5.0E-25 |
| sp|Q91VH1|ADR1_MOUSE | Adiponectin receptor protein 1 OS=Mus musculus GN=Adipor1 PE=1 SV=1 | 1 | 242 | 5.0E-25 |
| sp|Q75F81|IZH3_ASHGO | ADIPOR-like receptor IZH3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=IZH3 PE=3 SV=1 | 2 | 230 | 8.0E-25 |
| sp|Q9SVF3|HPP5_ARATH | Heptahelical transmembrane protein 5 OS=Arabidopsis thaliana GN=HHP5 PE=2 SV=1 | 57 | 226 | 8.0E-21 |
| sp|Q9SZG0|HHP4_ARATH | Heptahelical transmembrane protein 4 OS=Arabidopsis thaliana GN=HHP4 PE=2 SV=1 | 53 | 226 | 5.0E-20 |
| sp|Q6ETK9|ADPO2_ORYSJ | Heptahelical transmembrane protein ADIPOR2 OS=Oryza sativa subsp. japonica GN=ADIPOR2 PE=2 SV=1 | 48 | 228 | 7.0E-20 |
| sp|Q09749|ADRL_SCHPO | ADIPOR-like receptor SPBC12C2.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC12C2.09c PE=3 SV=1 | 1 | 224 | 2.0E-18 |
| sp|Q6TCH7|PAQR3_HUMAN | Progestin and adipoQ receptor family member 3 OS=Homo sapiens GN=PAQR3 PE=1 SV=2 | 1 | 243 | 7.0E-18 |
| sp|Q9ZUH8|HHP3_ARATH | Heptahelical transmembrane protein 3 OS=Arabidopsis thaliana GN=HHP3 PE=2 SV=2 | 48 | 242 | 3.0E-17 |
| sp|Q6TCG8|PAQR3_MOUSE | Progestin and adipoQ receptor family member 3 OS=Mus musculus GN=Paqr3 PE=2 SV=1 | 1 | 243 | 3.0E-17 |
| sp|Q03419|IZH1_YEAST | ADIPOR-like receptor IZH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IZH1 PE=1 SV=1 | 1 | 227 | 2.0E-16 |
| sp|Q84N34|HHP2_ARATH | Heptahelical transmembrane protein 2 OS=Arabidopsis thaliana GN=HHP2 PE=2 SV=1 | 31 | 242 | 3.0E-16 |
| sp|Q93ZH9|HHP1_ARATH | Heptahelical transmembrane protein 1 OS=Arabidopsis thaliana GN=HHP1 PE=1 SV=1 | 1 | 242 | 5.0E-16 |
| sp|B7F9G7|ADPO1_ORYSJ | Heptahelical transmembrane protein ADIPOR1 OS=Oryza sativa subsp. japonica GN=ADIPOR1 PE=2 SV=1 | 1 | 244 | 1.0E-15 |
| sp|Q10PI5|ADPO3_ORYSJ | Heptahelical transmembrane protein ADIPOR3 OS=Oryza sativa subsp. japonica GN=ADIPOR3 PE=2 SV=1 | 53 | 224 | 1.0E-15 |
| sp|Q753H5|IZH1_ASHGO | ADIPOR-like receptor IZH1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=IZH1 PE=3 SV=1 | 5 | 227 | 3.0E-15 |
| sp|A8WZU4|ADRL_CAEBR | Progestin and adipoQ receptor-like protein 1 OS=Caenorhabditis briggsae GN=paqr-1 PE=3 SV=2 | 1 | 243 | 7.0E-13 |
| sp|Q12442|IZH2_YEAST | ADIPOR-like receptor IZH2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IZH2 PE=1 SV=2 | 1 | 241 | 1.0E-12 |
| sp|Q9NXK6|MPRG_HUMAN | Membrane progestin receptor gamma OS=Homo sapiens GN=PAQR5 PE=1 SV=2 | 1 | 217 | 5.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 13 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 9 | 31 | 22 |
| 2 | 41 | 63 | 22 |
| 3 | 75 | 97 | 22 |
| 4 | 107 | 129 | 22 |
| 5 | 142 | 161 | 19 |
| 6 | 171 | 193 | 22 |
| 7 | 205 | 227 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| SC16a | Pure fungal culture | 78.25 | 40.15 | 116.36 |
| CcL | In ants, during behavior modification | 104.22 | 56.06 | 152.39 |
| CcD | In ants, recently dead | 102.84 | 55.23 | 150.45 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| SC16a | CcL | 0.246606 | no |
| SC16a | CcD | 0.273170 | no |
| CcL | CcD | 0.963727 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|7608 MFNISNESFNIWSHAIGLVLVLAVAFYFYPTSTNFGLSTKGDIFVAAVFFVMAGLTLVCSTVWHTMNAVADMNAI SIFACVDYTGISLLIAASIVTTEYTAFYCDPVSRWTYMTLTALLGIGGVLLPWNPRFNDADKSWARVAFYVGLAL TGFMPILQLYVTEGRDFVVDFYSPISKSLLVYLGGAVVYASKIPERWFPGVFDYIGGSHNLWHAAVLSGILFHYT AMQQFFSNAFHRAEAGCPA |
| Coding | >Ophio5|7608 ATGTTCAACATCTCCAACGAGTCCTTCAACATCTGGTCCCACGCCATCGGACTCGTCCTCGTCCTGGCCGTCGCC TTTTACTTCTACCCGACCAGCACAAACTTTGGCCTCAGCACAAAAGGCGACATCTTCGTCGCCGCCGTCTTCTTC GTCATGGCCGGCCTGACGCTCGTCTGCTCCACCGTCTGGCACACGATGAACGCCGTGGCCGACATGAACGCCATC TCCATCTTTGCCTGCGTAGACTACACCGGTATATCGCTGCTCATCGCCGCCTCCATCGTCACCACCGAGTACACG GCCTTTTACTGCGACCCCGTCAGCCGATGGACGTACATGACGCTCACCGCCCTCCTCGGCATCGGCGGCGTCCTC CTGCCCTGGAACCCAAGGTTCAACGACGCCGACAAGTCCTGGGCCAGGGTCGCCTTCTACGTGGGCCTCGCCCTG ACGGGGTTCATGCCCATCCTGCAGCTTTACGTGACCGAGGGTCGCGACTTTGTCGTCGACTTTTACTCGCCCATA TCCAAGTCCCTGCTCGTCTATCTCGGCGGCGCCGTCGTCTACGCCAGCAAAATCCCCGAGAGGTGGTTCCCCGGC GTCTTCGACTACATAGGAGGCAGCCATAATCTGTGGCACGCCGCCGTCCTGAGCGGCATCTTGTTTCATTACACG GCCATGCAGCAGTTTTTCTCCAACGCCTTTCACCGCGCCGAGGCCGGCTGTCCAGCC |
| Transcript | >Ophio5|7608 ATGTTCAACATCTCCAACGAGTCCTTCAACATCTGGTCCCACGCCATCGGACTCGTCCTCGTCCTGGCCGTCGCC TTTTACTTCTACCCGACCAGCACAAACTTTGGCCTCAGCACAAAAGGCGACATCTTCGTCGCCGCCGTCTTCTTC GTCATGGCCGGCCTGACGCTCGTCTGCTCCACCGTCTGGCACACGATGAACGCCGTGGCCGACATGAACGCCATC TCCATCTTTGCCTGCGTAGACTACACCGGTATATCGCTGCTCATCGCCGCCTCCATCGTCACCACCGAGTACACG GCCTTTTACTGCGACCCCGTCAGCCGATGGACGTACATGACGCTCACCGCCCTCCTCGGCATCGGCGGCGTCCTC CTGCCCTGGAACCCAAGGTTCAACGACGCCGACAAGTCCTGGGCCAGGGTCGCCTTCTACGTGGGCCTCGCCCTG ACGGGGTTCATGCCCATCCTGCAGCTTTACGTGACCGAGGGTCGCGACTTTGTCGTCGACTTTTACTCGCCCATA TCCAAGTCCCTGCTCGTCTATCTCGGCGGCGCCGTCGTCTACGCCAGCAAAATCCCCGAGAGGTGGTTCCCCGGC GTCTTCGACTACATAGGAGGCAGCCATAATCTGTGGCACGCCGCCGTCCTGAGCGGCATCTTGTTTCATTACACG GCCATGCAGCAGTTTTTCTCCAACGCCTTTCACCGCGCCGAGGCCGGCTGTCCAGCCTAA |
| Gene | >Ophio5|7608 ATGTTCAACATCTCCAACGAGTCCTTCAACATCTGGTCCCACGCCATCGGACTCGTCCTCGTCCTGGCCGTCGCC TTTTACTTCTACCCGACCAGCACAAACTTTGGCCTCAGCACAAAAGGCGACATCTTCGTCGCCGCCGTCTTCTTC GTCATGGCCGGCCTGACGCTCGTCTGCTCCACCGTCTGGCACACGATGAACGCCGTGGCCGACATGAACGCCATC TCCATCTTTGCCTGCGTAGACTACACCGGTATATCGCTGCTCATCGCCGCCTCCATCGTCACCACCGAGTACACG GCCTTTTACTGCGACCCCGTCAGCCGATGGACGTACATGACGCTCACCGCCCTCCTCGGCATCGGCGGCGTCCTC CTGCCCTGGAACCCAAGGTTCAACGACGCCGACAAGTCCTGGGCCAGGGTCGCCTTCTACGTGGGCCTCGCCCTG ACGGGGTTCATGCCCATCCTGCAGCTTTACGTGACCGAGGGTCGCGACTTTGTCGTCGACTTTTACTCGCCCATA TCCAAGTCCCTGCTCGTCTATCTCGGCGGCGCCGTCGTCTACGCCAGCAAAATCCCCGAGAGGTGGTTCCCCGGC GTCTTCGACTACATAGGAGGCAGCCATAATCTGTGGCACGCCGCCGTCCTGAGCGGCATCTTGTTTCATTACACG GCCATGCAGCAGTTTTTCTCCAACGCCTTTCACCGCGCCGAGGCCGGCTGTCCAGCCTAA |