Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|7600
Gene name
Location	scaffold_750:575..1841
Strand	+
Gene length (bp)	1266
Transcript length (bp)	1266
Coding sequence length (bp)	1263
Protein length (aa)	421

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05347	Complex1_LYR	Complex 1 protein (LYR family)	5.5E-07	17	77

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 32	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
SC16a	Pure fungal culture	24.93	11.63	38.24
CcL	In ants, during behavior modification	31.30	15.21	47.39
CcD	In ants, recently dead	31.99	15.76	48.22

Differential expression

Label1	Label2	Q-value	Significant difference
SC16a	CcL	0.412958	no
SC16a	CcD	0.364901	no
CcL	CcD	0.946172	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|7600 MPPLPYVPARDPRHRIAVLALYRALVRSVRAIPLPPDVVDGGSVTGLVRRRFVKHKHFTSLRLLYAAMAAGYRFL TMFAKAQTPASAEHGQLVAFLRSHPARQPASSRSARTSESESASRVPAEPLIKNIAGPYEPPRYVSSRMPRPQSS LNGPRRVPILAMTCHGQPFLRLQKPQPVAMSRAIGRKEAIFKKKLSNVVHITDEILPSAECEDEWDRQVAQLMVR ELGQNPDQDESLYTSFRWSAILGKLWMEWQLEKTWQDWIARGTALHELVEQERALAEQESATPRPDDDLDRRQLH QTSSDDCQPQEAPLKGSSDHHRHHEAVLSTDDFSRLFNGQPRPEAAHYRRFNADRSRETPNVGEYILPPSRLLTP ISPPGYAVDPFVGQAWAALIAAEKPRLTRALLNGSANQYLPSSFPS
Coding	>Ophio5\|7600 ATGCCTCCCTTGCCCTACGTCCCGGCCCGTGACCCGCGGCATCGGATTGCGGTCCTCGCCCTATACCGCGCCCTG GTCCGCTCCGTCCGAGCTATCCCTCTGCCGCCTGACGTCGTGGATGGCGGCTCTGTAACCGGCCTCGTCCGGAGG CGCTTCGTCAAGCACAAGCACTTCACTAGTCTGCGTCTCCTCTACGCCGCCATGGCGGCCGGTTACCGCTTCCTC ACCATGTTTGCCAAGGCCCAGACGCCCGCCTCCGCCGAGCACGGTCAGCTGGTCGCGTTCCTCCGCTCCCATCCG GCCCGTCAACCCGCCTCGTCCCGCTCCGCCCGGACGTCGGAGTCGGAAAGCGCGTCACGTGTTCCGGCCGAGCCC CTGATCAAGAACATCGCCGGACCCTACGAGCCGCCCCGATACGTCTCGTCTCGGATGCCCCGTCCGCAATCTTCC CTCAATGGCCCCCGCCGAGTGCCCATACTCGCCATGACTTGCCACGGTCAGCCCTTCCTGCGTCTCCAAAAGCCC CAACCGGTCGCCATGTCCCGCGCCATCGGCCGCAAAGAAGCCATCTTCAAGAAGAAGCTGAGTAACGTCGTCCAC ATCACCGACGAAATCTTACCCTCCGCCGAGTGCGAGGACGAGTGGGACCGTCAGGTCGCCCAGCTGATGGTGCGG GAGCTGGGTCAGAACCCAGACCAAGACGAGTCTCTCTACACGTCATTTCGCTGGAGCGCCATCCTCGGCAAGCTC TGGATGGAGTGGCAGCTGGAGAAGACGTGGCAGGACTGGATCGCCCGCGGAACCGCCCTCCACGAGCTGGTCGAG CAGGAACGGGCGCTGGCCGAGCAGGAGAGCGCGACGCCTCGACCCGATGACGACCTCGACCGCCGTCAGCTCCAT CAGACAAGCTCCGACGACTGTCAACCGCAAGAGGCACCCCTCAAGGGCAGCAGTGACCATCATCGCCATCACGAA GCGGTACTCTCCACAGACGACTTCAGTCGTCTTTTCAACGGACAGCCACGCCCCGAAGCCGCCCACTATCGACGT TTCAACGCAGACCGCAGCCGCGAGACTCCCAACGTCGGCGAATACATACTTCCCCCCTCCCGCCTCCTCACTCCC ATCTCCCCTCCCGGATATGCCGTAGACCCCTTCGTCGGCCAAGCCTGGGCCGCCCTCATAGCAGCTGAGAAGCCA CGACTGACCCGCGCCTTGCTCAACGGGAGCGCAAATCAATACCTGCCGTCGTCCTTCCCGTCC
Transcript	>Ophio5\|7600 ATGCCTCCCTTGCCCTACGTCCCGGCCCGTGACCCGCGGCATCGGATTGCGGTCCTCGCCCTATACCGCGCCCTG GTCCGCTCCGTCCGAGCTATCCCTCTGCCGCCTGACGTCGTGGATGGCGGCTCTGTAACCGGCCTCGTCCGGAGG CGCTTCGTCAAGCACAAGCACTTCACTAGTCTGCGTCTCCTCTACGCCGCCATGGCGGCCGGTTACCGCTTCCTC ACCATGTTTGCCAAGGCCCAGACGCCCGCCTCCGCCGAGCACGGTCAGCTGGTCGCGTTCCTCCGCTCCCATCCG GCCCGTCAACCCGCCTCGTCCCGCTCCGCCCGGACGTCGGAGTCGGAAAGCGCGTCACGTGTTCCGGCCGAGCCC CTGATCAAGAACATCGCCGGACCCTACGAGCCGCCCCGATACGTCTCGTCTCGGATGCCCCGTCCGCAATCTTCC CTCAATGGCCCCCGCCGAGTGCCCATACTCGCCATGACTTGCCACGGTCAGCCCTTCCTGCGTCTCCAAAAGCCC CAACCGGTCGCCATGTCCCGCGCCATCGGCCGCAAAGAAGCCATCTTCAAGAAGAAGCTGAGTAACGTCGTCCAC ATCACCGACGAAATCTTACCCTCCGCCGAGTGCGAGGACGAGTGGGACCGTCAGGTCGCCCAGCTGATGGTGCGG GAGCTGGGTCAGAACCCAGACCAAGACGAGTCTCTCTACACGTCATTTCGCTGGAGCGCCATCCTCGGCAAGCTC TGGATGGAGTGGCAGCTGGAGAAGACGTGGCAGGACTGGATCGCCCGCGGAACCGCCCTCCACGAGCTGGTCGAG CAGGAACGGGCGCTGGCCGAGCAGGAGAGCGCGACGCCTCGACCCGATGACGACCTCGACCGCCGTCAGCTCCAT CAGACAAGCTCCGACGACTGTCAACCGCAAGAGGCACCCCTCAAGGGCAGCAGTGACCATCATCGCCATCACGAA GCGGTACTCTCCACAGACGACTTCAGTCGTCTTTTCAACGGACAGCCACGCCCCGAAGCCGCCCACTATCGACGT TTCAACGCAGACCGCAGCCGCGAGACTCCCAACGTCGGCGAATACATACTTCCCCCCTCCCGCCTCCTCACTCCC ATCTCCCCTCCCGGATATGCCGTAGACCCCTTCGTCGGCCAAGCCTGGGCCGCCCTCATAGCAGCTGAGAAGCCA CGACTGACCCGCGCCTTGCTCAACGGGAGCGCAAATCAATACCTGCCGTCGTCCTTCCCGTCCTAG
Gene	>Ophio5\|7600 ATGCCTCCCTTGCCCTACGTCCCGGCCCGTGACCCGCGGCATCGGATTGCGGTCCTCGCCCTATACCGCGCCCTG GTCCGCTCCGTCCGAGCTATCCCTCTGCCGCCTGACGTCGTGGATGGCGGCTCTGTAACCGGCCTCGTCCGGAGG CGCTTCGTCAAGCACAAGCACTTCACTAGTCTGCGTCTCCTCTACGCCGCCATGGCGGCCGGTTACCGCTTCCTC ACCATGTTTGCCAAGGCCCAGACGCCCGCCTCCGCCGAGCACGGTCAGCTGGTCGCGTTCCTCCGCTCCCATCCG GCCCGTCAACCCGCCTCGTCCCGCTCCGCCCGGACGTCGGAGTCGGAAAGCGCGTCACGTGTTCCGGCCGAGCCC CTGATCAAGAACATCGCCGGACCCTACGAGCCGCCCCGATACGTCTCGTCTCGGATGCCCCGTCCGCAATCTTCC CTCAATGGCCCCCGCCGAGTGCCCATACTCGCCATGACTTGCCACGGTCAGCCCTTCCTGCGTCTCCAAAAGCCC CAACCGGTCGCCATGTCCCGCGCCATCGGCCGCAAAGAAGCCATCTTCAAGAAGAAGCTGAGTAACGTCGTCCAC ATCACCGACGAAATCTTACCCTCCGCCGAGTGCGAGGACGAGTGGGACCGTCAGGTCGCCCAGCTGATGGTGCGG GAGCTGGGTCAGAACCCAGACCAAGACGAGTCTCTCTACACGTCATTTCGCTGGAGCGCCATCCTCGGCAAGCTC TGGATGGAGTGGCAGCTGGAGAAGACGTGGCAGGACTGGATCGCCCGCGGAACCGCCCTCCACGAGCTGGTCGAG CAGGAACGGGCGCTGGCCGAGCAGGAGAGCGCGACGCCTCGACCCGATGACGACCTCGACCGCCGTCAGCTCCAT CAGACAAGCTCCGACGACTGTCAACCGCAAGAGGCACCCCTCAAGGGCAGCAGTGACCATCATCGCCATCACGAA GCGGTACTCTCCACAGACGACTTCAGTCGTCTTTTCAACGGACAGCCACGCCCCGAAGCCGCCCACTATCGACGT TTCAACGCAGACCGCAGCCGCGAGACTCCCAACGTCGGCGAATACATACTTCCCCCCTCCCGCCTCCTCACTCCC ATCTCCCCTCCCGGATATGCCGTAGACCCCTTCGTCGGCCAAGCCTGGGCCGCCCTCATAGCAGCTGAGAAGCCA CGACTGACCCGCGCCTTGCTCAACGGGAGCGCAAATCAATACCTGCCGTCGTCCTTCCCGTCCTAG

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