Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7600
Gene name
Locationscaffold_750:575..1841
Strand+
Gene length (bp)1266
Transcript length (bp)1266
Coding sequence length (bp)1263
Protein length (aa) 421

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05347 Complex1_LYR Complex 1 protein (LYR family) 5.5E-07 17 77

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7600
MPPLPYVPARDPRHRIAVLALYRALVRSVRAIPLPPDVVDGGSVTGLVRRRFVKHKHFTSLRLLYAAMAAGYRFL
TMFAKAQTPASAEHGQLVAFLRSHPARQPASSRSARTSESESASRVPAEPLIKNIAGPYEPPRYVSSRMPRPQSS
LNGPRRVPILAMTCHGQPFLRLQKPQPVAMSRAIGRKEAIFKKKLSNVVHITDEILPSAECEDEWDRQVAQLMVR
ELGQNPDQDESLYTSFRWSAILGKLWMEWQLEKTWQDWIARGTALHELVEQERALAEQESATPRPDDDLDRRQLH
QTSSDDCQPQEAPLKGSSDHHRHHEAVLSTDDFSRLFNGQPRPEAAHYRRFNADRSRETPNVGEYILPPSRLLTP
ISPPGYAVDPFVGQAWAALIAAEKPRLTRALLNGSANQYLPSSFPS
Coding >Ophio5|7600
ATGCCTCCCTTGCCCTACGTCCCGGCCCGTGACCCGCGGCATCGGATTGCGGTCCTCGCCCTATACCGCGCCCTG
GTCCGCTCCGTCCGAGCTATCCCTCTGCCGCCTGACGTCGTGGATGGCGGCTCTGTAACCGGCCTCGTCCGGAGG
CGCTTCGTCAAGCACAAGCACTTCACTAGTCTGCGTCTCCTCTACGCCGCCATGGCGGCCGGTTACCGCTTCCTC
ACCATGTTTGCCAAGGCCCAGACGCCCGCCTCCGCCGAGCACGGTCAGCTGGTCGCGTTCCTCCGCTCCCATCCG
GCCCGTCAACCCGCCTCGTCCCGCTCCGCCCGGACGTCGGAGTCGGAAAGCGCGTCACGTGTTCCGGCCGAGCCC
CTGATCAAGAACATCGCCGGACCCTACGAGCCGCCCCGATACGTCTCGTCTCGGATGCCCCGTCCGCAATCTTCC
CTCAATGGCCCCCGCCGAGTGCCCATACTCGCCATGACTTGCCACGGTCAGCCCTTCCTGCGTCTCCAAAAGCCC
CAACCGGTCGCCATGTCCCGCGCCATCGGCCGCAAAGAAGCCATCTTCAAGAAGAAGCTGAGTAACGTCGTCCAC
ATCACCGACGAAATCTTACCCTCCGCCGAGTGCGAGGACGAGTGGGACCGTCAGGTCGCCCAGCTGATGGTGCGG
GAGCTGGGTCAGAACCCAGACCAAGACGAGTCTCTCTACACGTCATTTCGCTGGAGCGCCATCCTCGGCAAGCTC
TGGATGGAGTGGCAGCTGGAGAAGACGTGGCAGGACTGGATCGCCCGCGGAACCGCCCTCCACGAGCTGGTCGAG
CAGGAACGGGCGCTGGCCGAGCAGGAGAGCGCGACGCCTCGACCCGATGACGACCTCGACCGCCGTCAGCTCCAT
CAGACAAGCTCCGACGACTGTCAACCGCAAGAGGCACCCCTCAAGGGCAGCAGTGACCATCATCGCCATCACGAA
GCGGTACTCTCCACAGACGACTTCAGTCGTCTTTTCAACGGACAGCCACGCCCCGAAGCCGCCCACTATCGACGT
TTCAACGCAGACCGCAGCCGCGAGACTCCCAACGTCGGCGAATACATACTTCCCCCCTCCCGCCTCCTCACTCCC
ATCTCCCCTCCCGGATATGCCGTAGACCCCTTCGTCGGCCAAGCCTGGGCCGCCCTCATAGCAGCTGAGAAGCCA
CGACTGACCCGCGCCTTGCTCAACGGGAGCGCAAATCAATACCTGCCGTCGTCCTTCCCGTCC
Transcript >Ophio5|7600
ATGCCTCCCTTGCCCTACGTCCCGGCCCGTGACCCGCGGCATCGGATTGCGGTCCTCGCCCTATACCGCGCCCTG
GTCCGCTCCGTCCGAGCTATCCCTCTGCCGCCTGACGTCGTGGATGGCGGCTCTGTAACCGGCCTCGTCCGGAGG
CGCTTCGTCAAGCACAAGCACTTCACTAGTCTGCGTCTCCTCTACGCCGCCATGGCGGCCGGTTACCGCTTCCTC
ACCATGTTTGCCAAGGCCCAGACGCCCGCCTCCGCCGAGCACGGTCAGCTGGTCGCGTTCCTCCGCTCCCATCCG
GCCCGTCAACCCGCCTCGTCCCGCTCCGCCCGGACGTCGGAGTCGGAAAGCGCGTCACGTGTTCCGGCCGAGCCC
CTGATCAAGAACATCGCCGGACCCTACGAGCCGCCCCGATACGTCTCGTCTCGGATGCCCCGTCCGCAATCTTCC
CTCAATGGCCCCCGCCGAGTGCCCATACTCGCCATGACTTGCCACGGTCAGCCCTTCCTGCGTCTCCAAAAGCCC
CAACCGGTCGCCATGTCCCGCGCCATCGGCCGCAAAGAAGCCATCTTCAAGAAGAAGCTGAGTAACGTCGTCCAC
ATCACCGACGAAATCTTACCCTCCGCCGAGTGCGAGGACGAGTGGGACCGTCAGGTCGCCCAGCTGATGGTGCGG
GAGCTGGGTCAGAACCCAGACCAAGACGAGTCTCTCTACACGTCATTTCGCTGGAGCGCCATCCTCGGCAAGCTC
TGGATGGAGTGGCAGCTGGAGAAGACGTGGCAGGACTGGATCGCCCGCGGAACCGCCCTCCACGAGCTGGTCGAG
CAGGAACGGGCGCTGGCCGAGCAGGAGAGCGCGACGCCTCGACCCGATGACGACCTCGACCGCCGTCAGCTCCAT
CAGACAAGCTCCGACGACTGTCAACCGCAAGAGGCACCCCTCAAGGGCAGCAGTGACCATCATCGCCATCACGAA
GCGGTACTCTCCACAGACGACTTCAGTCGTCTTTTCAACGGACAGCCACGCCCCGAAGCCGCCCACTATCGACGT
TTCAACGCAGACCGCAGCCGCGAGACTCCCAACGTCGGCGAATACATACTTCCCCCCTCCCGCCTCCTCACTCCC
ATCTCCCCTCCCGGATATGCCGTAGACCCCTTCGTCGGCCAAGCCTGGGCCGCCCTCATAGCAGCTGAGAAGCCA
CGACTGACCCGCGCCTTGCTCAACGGGAGCGCAAATCAATACCTGCCGTCGTCCTTCCCGTCCTAG
Gene >Ophio5|7600
ATGCCTCCCTTGCCCTACGTCCCGGCCCGTGACCCGCGGCATCGGATTGCGGTCCTCGCCCTATACCGCGCCCTG
GTCCGCTCCGTCCGAGCTATCCCTCTGCCGCCTGACGTCGTGGATGGCGGCTCTGTAACCGGCCTCGTCCGGAGG
CGCTTCGTCAAGCACAAGCACTTCACTAGTCTGCGTCTCCTCTACGCCGCCATGGCGGCCGGTTACCGCTTCCTC
ACCATGTTTGCCAAGGCCCAGACGCCCGCCTCCGCCGAGCACGGTCAGCTGGTCGCGTTCCTCCGCTCCCATCCG
GCCCGTCAACCCGCCTCGTCCCGCTCCGCCCGGACGTCGGAGTCGGAAAGCGCGTCACGTGTTCCGGCCGAGCCC
CTGATCAAGAACATCGCCGGACCCTACGAGCCGCCCCGATACGTCTCGTCTCGGATGCCCCGTCCGCAATCTTCC
CTCAATGGCCCCCGCCGAGTGCCCATACTCGCCATGACTTGCCACGGTCAGCCCTTCCTGCGTCTCCAAAAGCCC
CAACCGGTCGCCATGTCCCGCGCCATCGGCCGCAAAGAAGCCATCTTCAAGAAGAAGCTGAGTAACGTCGTCCAC
ATCACCGACGAAATCTTACCCTCCGCCGAGTGCGAGGACGAGTGGGACCGTCAGGTCGCCCAGCTGATGGTGCGG
GAGCTGGGTCAGAACCCAGACCAAGACGAGTCTCTCTACACGTCATTTCGCTGGAGCGCCATCCTCGGCAAGCTC
TGGATGGAGTGGCAGCTGGAGAAGACGTGGCAGGACTGGATCGCCCGCGGAACCGCCCTCCACGAGCTGGTCGAG
CAGGAACGGGCGCTGGCCGAGCAGGAGAGCGCGACGCCTCGACCCGATGACGACCTCGACCGCCGTCAGCTCCAT
CAGACAAGCTCCGACGACTGTCAACCGCAAGAGGCACCCCTCAAGGGCAGCAGTGACCATCATCGCCATCACGAA
GCGGTACTCTCCACAGACGACTTCAGTCGTCTTTTCAACGGACAGCCACGCCCCGAAGCCGCCCACTATCGACGT
TTCAACGCAGACCGCAGCCGCGAGACTCCCAACGTCGGCGAATACATACTTCCCCCCTCCCGCCTCCTCACTCCC
ATCTCCCCTCCCGGATATGCCGTAGACCCCTTCGTCGGCCAAGCCTGGGCCGCCCTCATAGCAGCTGAGAAGCCA
CGACTGACCCGCGCCTTGCTCAACGGGAGCGCAAATCAATACCTGCCGTCGTCCTTCCCGTCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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