© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophio5|7565 |
| Gene name | |
| Location | scaffold_745:2036..3295 |
| Strand | - |
| Gene length (bp) | 1259 |
| Transcript length (bp) | 1167 |
| Coding sequence length (bp) | 1164 |
| Protein length (aa) | 388 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13489 | Methyltransf_23 | Methyltransferase domain | 3.9E-14 | 158 | 354 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q06668|OMS1_YEAST | Methyltransferase OMS1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OMS1 PE=1 SV=1 | 129 | 371 | 6.0E-25 |
| sp|O43033|YGU4_SCHPO | Uncharacterized methyltransferase C3B9.04, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3B9.04 PE=3 SV=1 | 119 | 381 | 2.0E-19 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|7565 MTITLRGAGLLAPSQRRLASSSRSHRSKRPPPPPLPPRPPRPSPQQAPTIRPYKPIINRKPPAPPTPPPPTQPDT LLSLWRRSWIPLTGASLVAGCLGFYIVGTVVATSFAAPDGDATPTGRPPALTGENAARFDRELDYSEWWMGISGL RRALAGYATGHVLEVAVGGGRNLKYYDWRPLCVALEQPSSAVVRRRPLNKGITSFTGLDINVDMLDVARRGLIDA VPPLAAIAPLVTASSMADHMGGRLSFLGDRVRLVHADVHGRLPTPPTADARYYDTVIQTFGLCSVSNPVAVLTNL ASVVKPGSGRIILLEHGRGWFGLINGLLDRYAGGHCAKFGCWWNRDIDAIIRQAAEETPGLEIIKLERPRMWQFG TLLRVELRVVEEE |
| Coding | >Ophio5|7565 ATGACGATAACTCTGCGTGGCGCAGGCCTCTTGGCTCCATCGCAACGCCGCCTCGCCAGTTCCAGTCGATCTCAT CGAAGTAAGCGACCACCGCCCCCTCCTCTTCCTCCTCGTCCTCCTCGTCCTTCTCCTCAACAGGCCCCGACCATC AGACCGTATAAGCCAATCATCAATCGCAAGCCGCCCGCTCCGCCCACCCCTCCTCCGCCAACCCAACCCGACACC CTCCTCAGCCTGTGGCGCCGCTCCTGGATACCCCTGACGGGCGCCTCTCTCGTCGCTGGCTGCCTCGGCTTCTAC ATCGTCGGCACCGTCGTCGCCACCTCCTTCGCCGCCCCTGACGGAGATGCCACGCCTACCGGCCGCCCACCCGCC CTGACGGGCGAAAACGCCGCCCGCTTCGATCGCGAGCTCGACTACTCGGAGTGGTGGATGGGCATATCGGGCTTG CGTCGCGCCCTCGCCGGCTACGCTACTGGACACGTTCTCGAGGTCGCCGTCGGTGGTGGTCGTAACCTCAAGTAC TACGATTGGCGCCCGCTGTGCGTCGCACTCGAACAACCCTCTTCAGCTGTCGTGCGCCGTCGTCCCCTTAACAAG GGCATCACCTCCTTTACCGGCCTCGACATCAACGTCGATATGCTCGATGTCGCCCGCCGCGGCCTCATCGACGCC GTACCTCCTTTGGCCGCCATTGCGCCTCTCGTCACCGCATCCTCCATGGCCGACCACATGGGCGGCCGCCTCTCC TTTCTCGGCGACCGCGTGCGTCTCGTCCACGCCGACGTACACGGACGCCTACCGACCCCGCCCACGGCCGACGCT CGCTACTACGACACCGTCATCCAGACCTTTGGTCTCTGCTCCGTCTCCAATCCCGTCGCCGTCTTGACCAACCTC GCCTCCGTCGTCAAGCCCGGCTCCGGCCGCATCATCCTGCTCGAGCACGGCCGGGGCTGGTTCGGCTTGATCAAC GGCCTGCTCGACAGGTACGCCGGCGGGCACTGCGCAAAGTTTGGCTGCTGGTGGAACAGGGACATCGACGCCATC ATCCGCCAGGCCGCTGAGGAGACACCGGGGCTCGAGATCATCAAGCTGGAGCGCCCCAGGATGTGGCAGTTTGGG ACCCTGCTCCGGGTCGAGCTTCGGGTGGTAGAAGAGGAA |
| Transcript | >Ophio5|7565 ATGACGATAACTCTGCGTGGCGCAGGCCTCTTGGCTCCATCGCAACGCCGCCTCGCCAGTTCCAGTCGATCTCAT CGAAGTAAGCGACCACCGCCCCCTCCTCTTCCTCCTCGTCCTCCTCGTCCTTCTCCTCAACAGGCCCCGACCATC AGACCGTATAAGCCAATCATCAATCGCAAGCCGCCCGCTCCGCCCACCCCTCCTCCGCCAACCCAACCCGACACC CTCCTCAGCCTGTGGCGCCGCTCCTGGATACCCCTGACGGGCGCCTCTCTCGTCGCTGGCTGCCTCGGCTTCTAC ATCGTCGGCACCGTCGTCGCCACCTCCTTCGCCGCCCCTGACGGAGATGCCACGCCTACCGGCCGCCCACCCGCC CTGACGGGCGAAAACGCCGCCCGCTTCGATCGCGAGCTCGACTACTCGGAGTGGTGGATGGGCATATCGGGCTTG CGTCGCGCCCTCGCCGGCTACGCTACTGGACACGTTCTCGAGGTCGCCGTCGGTGGTGGTCGTAACCTCAAGTAC TACGATTGGCGCCCGCTGTGCGTCGCACTCGAACAACCCTCTTCAGCTGTCGTGCGCCGTCGTCCCCTTAACAAG GGCATCACCTCCTTTACCGGCCTCGACATCAACGTCGATATGCTCGATGTCGCCCGCCGCGGCCTCATCGACGCC GTACCTCCTTTGGCCGCCATTGCGCCTCTCGTCACCGCATCCTCCATGGCCGACCACATGGGCGGCCGCCTCTCC TTTCTCGGCGACCGCGTGCGTCTCGTCCACGCCGACGTACACGGACGCCTACCGACCCCGCCCACGGCCGACGCT CGCTACTACGACACCGTCATCCAGACCTTTGGTCTCTGCTCCGTCTCCAATCCCGTCGCCGTCTTGACCAACCTC GCCTCCGTCGTCAAGCCCGGCTCCGGCCGCATCATCCTGCTCGAGCACGGCCGGGGCTGGTTCGGCTTGATCAAC GGCCTGCTCGACAGGTACGCCGGCGGGCACTGCGCAAAGTTTGGCTGCTGGTGGAACAGGGACATCGACGCCATC ATCCGCCAGGCCGCTGAGGAGACACCGGGGCTCGAGATCATCAAGCTGGAGCGCCCCAGGATGTGGCAGTTTGGG ACCCTGCTCCGGGTCGAGCTTCGGGTGGTAGAAGAGGAATGA |
| Gene | >Ophio5|7565 ATGACGATAACTCTGCGTGGCGCAGGCCTCTTGGCTCCATCGCAACGCCGCCTCGCCAGTTCCAGTCGATCTCAT CGAAGTAAGCGACCACCGCCCCCTCCTCTTCCTCCTCGTCCTCCTCGTCCTTCTCCTCAACAGGCCCCGACCATC AGACCGTATAAGCCGTACGCTTCCTTCCCGCTTCCCAACGCCTCCACCGGGAAAAGCCGTATAGGAAACGTCCCT CCTCCCACTAACACGGTTTCTCTCCATCCAGAATCATCAATCGCAAGCCGCCCGCTCCGCCCACCCCTCCTCCGC CAACCCAACCCGACACCCTCCTCAGCCTGTGGCGCCGCTCCTGGATACCCCTGACGGGCGCCTCTCTCGTCGCTG GCTGCCTCGGCTTCTACATCGTCGGCACCGTCGTCGCCACCTCCTTCGCCGCCCCTGACGGAGATGCCACGCCTA CCGGCCGCCCACCCGCCCTGACGGGCGAAAACGCCGCCCGCTTCGATCGCGAGCTCGACTACTCGGAGTGGTGGA TGGGCATATCGGGCTTGCGTCGCGCCCTCGCCGGCTACGCTACTGGACACGTTCTCGAGGTCGCCGTCGGTGGTG GTCGTAACCTCAAGTACTACGATTGGCGCCCGCTGTGCGTCGCACTCGAACAACCCTCTTCAGCTGTCGTGCGCC GTCGTCCCCTTAACAAGGGCATCACCTCCTTTACCGGCCTCGACATCAACGTCGATATGCTCGATGTCGCCCGCC GCGGCCTCATCGACGCCGTACCTCCTTTGGCCGCCATTGCGCCTCTCGTCACCGCATCCTCCATGGCCGACCACA TGGGCGGCCGCCTCTCCTTTCTCGGCGACCGCGTGCGTCTCGTCCACGCCGACGTACACGGACGCCTACCGACCC CGCCCACGGCCGACGCTCGCTACTACGACACCGTCATCCAGACCTTTGGTCTCTGCTCCGTCTCCAATCCCGTCG CCGTCTTGACCAACCTCGCCTCCGTCGTCAAGCCCGGCTCCGGCCGCATCATCCTGCTCGAGCACGGCCGGGGCT GGTTCGGCTTGATCAACGGCCTGCTCGACAGGTACGCCGGCGGGCACTGCGCAAAGTTTGGCTGCTGGTGGAACA GGGACATCGACGCCATCATCCGCCAGGCCGCTGAGGAGACACCGGGGCTCGAGATCATCAAGCTGGAGCGCCCCA GGATGTGGCAGTTTGGGACCCTGCTCCGGGTCGAGCTTCGGGTGGTAGAAGAGGAATGA |