© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|7554 |
| Gene name | |
| Location | scaffold_740:7803..8061 |
| Strand | - |
| Gene length (bp) | 258 |
| Transcript length (bp) | 258 |
| Coding sequence length (bp) | 255 |
| Protein length (aa) | 85 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cell membrane|Lysosome/Vacuole | Signal peptide|Transmembrane domain | 0.2078 | 0.1795 | 0.2032 | 0.8253 | 0.179 | 0.0129 | 0.2387 | 0.6691 | 0.2637 | 0.0418 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 7418 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-floridani | Ophcf2|05926 |
| Ophiocordyceps camponoti-rufipedis | Ophun1|5220 |
| Ophiocordyceps kimflemingae | Ophio5|7554 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|7554 MGVVRFAIELVAIPIILVGLGILTIFAIVYIRQRKKRTKDLEQQSETLPPFVCDQPPPNYSNNHYTAMPMKPPVA MVQEHNHATG |
| Coding | >Ophio5|7554 ATGGGCGTCGTCCGCTTCGCCATCGAGCTCGTCGCCATCCCCATCATCCTAGTCGGTCTTGGCATCCTTACCATC TTTGCCATCGTCTACATCCGTCAGCGCAAGAAACGGACCAAGGATCTCGAGCAGCAGTCCGAGACGCTGCCGCCG TTTGTCTGCGACCAGCCACCGCCGAATTACTCGAATAACCACTACACGGCTATGCCGATGAAGCCGCCTGTCGCT ATGGTGCAGGAGCACAATCATGCTACTGGC |
| Transcript | >Ophio5|7554 ATGGGCGTCGTCCGCTTCGCCATCGAGCTCGTCGCCATCCCCATCATCCTAGTCGGTCTTGGCATCCTTACCATC TTTGCCATCGTCTACATCCGTCAGCGCAAGAAACGGACCAAGGATCTCGAGCAGCAGTCCGAGACGCTGCCGCCG TTTGTCTGCGACCAGCCACCGCCGAATTACTCGAATAACCACTACACGGCTATGCCGATGAAGCCGCCTGTCGCT ATGGTGCAGGAGCACAATCATGCTACTGGCTGA |
| Gene | >Ophio5|7554 ATGGGCGTCGTCCGCTTCGCCATCGAGCTCGTCGCCATCCCCATCATCCTAGTCGGTCTTGGCATCCTTACCATC TTTGCCATCGTCTACATCCGTCAGCGCAAGAAACGGACCAAGGATCTCGAGCAGCAGTCCGAGACGCTGCCGCCG TTTGTCTGCGACCAGCCACCGCCGAATTACTCGAATAACCACTACACGGCTATGCCGATGAAGCCGCCTGTCGCT ATGGTGCAGGAGCACAATCATGCTACTGGCTGA |