Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7543
Gene name
Locationscaffold_74:24029..24531
Strand+
Gene length (bp)502
Transcript length (bp)333
Coding sequence length (bp)330
Protein length (aa) 110

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF15932 DUF4748 Domain of unknown function (DUF4748) 1.0E-21 3 51

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 7 25 18

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7543
MNTVRSFWIGWGSLCVAGAGAYYLAKREINADRQTKLERARKKQFETRALDSGAAAEHARTDSAGSPSQEATSDP
APTRHAPATESERVAEKSKYESSVPYRAPKGDRFS
Coding >Ophio5|7543
ATGAACACCGTTCGATCATTCTGGATTGGTTGGGGATCTCTCTGTGTCGCCGGCGCCGGCGCATATTACCTGGCC
AAGCGCGAGATCAACGCCGACCGCCAGACCAAGCTTGAACGGGCGCGCAAGAAGCAATTCGAGACGCGGGCGCTC
GATTCCGGTGCTGCCGCCGAACACGCGAGGACGGATAGTGCCGGTTCTCCCAGCCAGGAGGCCACCTCGGATCCC
GCCCCGACGAGGCACGCGCCGGCGACGGAGTCGGAGCGCGTGGCGGAAAAGAGCAAGTACGAGAGCAGCGTCCCG
TACCGGGCACCGAAAGGCGATCGCTTCTCT
Transcript >Ophio5|7543
ATGAACACCGTTCGATCATTCTGGATTGGTTGGGGATCTCTCTGTGTCGCCGGCGCCGGCGCATATTACCTGGCC
AAGCGCGAGATCAACGCCGACCGCCAGACCAAGCTTGAACGGGCGCGCAAGAAGCAATTCGAGACGCGGGCGCTC
GATTCCGGTGCTGCCGCCGAACACGCGAGGACGGATAGTGCCGGTTCTCCCAGCCAGGAGGCCACCTCGGATCCC
GCCCCGACGAGGCACGCGCCGGCGACGGAGTCGGAGCGCGTGGCGGAAAAGAGCAAGTACGAGAGCAGCGTCCCG
TACCGGGCACCGAAAGGCGATCGCTTCTCTTAG
Gene >Ophio5|7543
ATGAACACCGTGCGTGCAGCTCTCCCGCCCCTCCTATCTATCCATCACTGACTGCTTACCGCACCAGGTTCGATC
ATTCTGGTGCGCCGCCTGAGCGCCCTCGTCGGCCTCGCACCGCTGACGCTCTTCCGGACGCAGGATTGGTTGGGG
ATCTCTCTGTGTCGGTAGGTTTCCCGTCCCGTTCCGTACGTAACGCTGACGGCTGATGTCCGCTGCAGCCGGCGC
CGGCGCATATTACCTGGCCAAGCGCGAGATCAACGCCGACCGCCAGACCAAGCTTGAACGGGCGCGCAAGAAGCA
ATTCGAGACGCGGGCGCTCGATTCCGGTGCTGCCGCCGAACACGCGAGGACGGATAGTGCCGGTTCTCCCAGCCA
GGAGGCCACCTCGGATCCCGCCCCGACGAGGCACGCGCCGGCGACGGAGTCGGAGCGCGTGGCGGAAAAGAGCAA
GTACGAGAGCAGCGTCCCGTACCGGGCACCGAAAGGCGATCGCTTCTCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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