© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|7539 |
| Gene name | |
| Location | scaffold_74:13728..14595 |
| Strand | - |
| Gene length (bp) | 867 |
| Transcript length (bp) | 867 |
| Coding sequence length (bp) | 864 |
| Protein length (aa) | 288 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00293 | NUDIX | NUDIX domain | 9.5E-10 | 6 | 85 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P91148|NDX7_CAEEL | Putative nudix hydrolase 7 OS=Caenorhabditis elegans GN=ndx-7 PE=3 SV=2 | 1 | 197 | 8.0E-16 |
| sp|Q5ZL13|NUD19_CHICK | Nucleoside diphosphate-linked moiety X motif 19 OS=Gallus gallus GN=NUDT19 PE=2 SV=1 | 1 | 198 | 4.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|7539 MAAEARASASVVVLSPQNEVLMVQRTRTSSYPSALVFPGGNLDGQDGAVAERHEDGPAYRHAAVRECFEETGILL AVGRNGDRLALSQEETETARRRVHAGEVRFSDWLETVGAEVDTDGLIPFTRWITPAFMPRRFTTQMYLHLLPLDG PTPSPSSDGGKENTAVTFCSPTTILSRVATGQAIVFPPQYYLLHLLSDHVEATSPAEGRKRLLTDLPHNDMVICP RPMGKRPDGRLILALDDPGVSELRASGRKGDTRRILLVDFAAAAAAGPTGLEVRQRRGEGAFL |
| Coding | >Ophio5|7539 ATGGCGGCGGAAGCGCGGGCCAGCGCTTCGGTGGTGGTGCTATCGCCGCAAAATGAAGTATTAATGGTACAGCGG ACTCGGACGTCATCATACCCATCGGCCTTGGTCTTTCCGGGCGGCAATCTGGATGGGCAAGACGGCGCGGTAGCG GAGAGACACGAGGACGGGCCGGCGTATCGACATGCTGCCGTTCGGGAGTGCTTCGAGGAGACGGGCATCTTGCTG GCTGTAGGGCGAAACGGCGACCGGTTGGCGTTGTCGCAGGAGGAGACGGAGACGGCGAGGCGGCGAGTTCATGCC GGCGAGGTGCGATTCAGTGACTGGTTGGAGACGGTGGGAGCCGAAGTTGATACGGATGGCCTCATCCCCTTTACG CGTTGGATCACGCCGGCCTTTATGCCTCGGCGCTTCACGACGCAAATGTACCTCCATCTCCTCCCACTCGACGGC CCGACGCCCTCTCCCAGCAGCGACGGCGGCAAAGAGAACACGGCAGTTACATTCTGCAGTCCGACGACGATCCTC TCGCGCGTAGCGACCGGCCAAGCCATCGTCTTCCCTCCGCAGTACTATCTGCTACACCTACTGTCCGACCACGTC GAAGCAACGTCGCCAGCCGAGGGGCGCAAGAGGCTACTGACCGACTTACCGCACAACGACATGGTCATCTGCCCG CGGCCGATGGGCAAGAGACCCGACGGTCGCTTGATTCTAGCTCTGGATGATCCGGGCGTGTCGGAGTTGCGCGCC TCGGGTCGCAAGGGCGATACTCGACGTATCTTGCTCGTTGACTTTGCCGCCGCCGCCGCTGCTGGGCCGACGGGG TTGGAGGTGCGGCAGAGGCGGGGTGAAGGAGCGTTTTTG |
| Transcript | >Ophio5|7539 ATGGCGGCGGAAGCGCGGGCCAGCGCTTCGGTGGTGGTGCTATCGCCGCAAAATGAAGTATTAATGGTACAGCGG ACTCGGACGTCATCATACCCATCGGCCTTGGTCTTTCCGGGCGGCAATCTGGATGGGCAAGACGGCGCGGTAGCG GAGAGACACGAGGACGGGCCGGCGTATCGACATGCTGCCGTTCGGGAGTGCTTCGAGGAGACGGGCATCTTGCTG GCTGTAGGGCGAAACGGCGACCGGTTGGCGTTGTCGCAGGAGGAGACGGAGACGGCGAGGCGGCGAGTTCATGCC GGCGAGGTGCGATTCAGTGACTGGTTGGAGACGGTGGGAGCCGAAGTTGATACGGATGGCCTCATCCCCTTTACG CGTTGGATCACGCCGGCCTTTATGCCTCGGCGCTTCACGACGCAAATGTACCTCCATCTCCTCCCACTCGACGGC CCGACGCCCTCTCCCAGCAGCGACGGCGGCAAAGAGAACACGGCAGTTACATTCTGCAGTCCGACGACGATCCTC TCGCGCGTAGCGACCGGCCAAGCCATCGTCTTCCCTCCGCAGTACTATCTGCTACACCTACTGTCCGACCACGTC GAAGCAACGTCGCCAGCCGAGGGGCGCAAGAGGCTACTGACCGACTTACCGCACAACGACATGGTCATCTGCCCG CGGCCGATGGGCAAGAGACCCGACGGTCGCTTGATTCTAGCTCTGGATGATCCGGGCGTGTCGGAGTTGCGCGCC TCGGGTCGCAAGGGCGATACTCGACGTATCTTGCTCGTTGACTTTGCCGCCGCCGCCGCTGCTGGGCCGACGGGG TTGGAGGTGCGGCAGAGGCGGGGTGAAGGAGCGTTTTTGTGA |
| Gene | >Ophio5|7539 ATGGCGGCGGAAGCGCGGGCCAGCGCTTCGGTGGTGGTGCTATCGCCGCAAAATGAAGTATTAATGGTACAGCGG ACTCGGACGTCATCATACCCATCGGCCTTGGTCTTTCCGGGCGGCAATCTGGATGGGCAAGACGGCGCGGTAGCG GAGAGACACGAGGACGGGCCGGCGTATCGACATGCTGCCGTTCGGGAGTGCTTCGAGGAGACGGGCATCTTGCTG GCTGTAGGGCGAAACGGCGACCGGTTGGCGTTGTCGCAGGAGGAGACGGAGACGGCGAGGCGGCGAGTTCATGCC GGCGAGGTGCGATTCAGTGACTGGTTGGAGACGGTGGGAGCCGAAGTTGATACGGATGGCCTCATCCCCTTTACG CGTTGGATCACGCCGGCCTTTATGCCTCGGCGCTTCACGACGCAAATGTACCTCCATCTCCTCCCACTCGACGGC CCGACGCCCTCTCCCAGCAGCGACGGCGGCAAAGAGAACACGGCAGTTACATTCTGCAGTCCGACGACGATCCTC TCGCGCGTAGCGACCGGCCAAGCCATCGTCTTCCCTCCGCAGTACTATCTGCTACACCTACTGTCCGACCACGTC GAAGCAACGTCGCCAGCCGAGGGGCGCAAGAGGCTACTGACCGACTTACCGCACAACGACATGGTCATCTGCCCG CGGCCGATGGGCAAGAGACCCGACGGTCGCTTGATTCTAGCTCTGGATGATCCGGGCGTGTCGGAGTTGCGCGCC TCGGGTCGCAAGGGCGATACTCGACGTATCTTGCTCGTTGACTTTGCCGCCGCCGCCGCTGCTGGGCCGACGGGG TTGGAGGTGCGGCAGAGGCGGGGTGAAGGAGCGTTTTTGTGA |