Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7520
Gene name
Locationscaffold_735:647..1966
Strand+
Gene length (bp)1319
Transcript length (bp)972
Coding sequence length (bp)969
Protein length (aa) 323

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 303 322 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7520
MSSLPTSLRTRSPLTRSLPTLLPRLSTPRPEQPSYPEQPSYEPEQPAYPEQPSYEPEQPAYPEQPSYEPEQPAYP
EQPSYEPEQPAYPEQPSYEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXEQPSYEPKEPSYEPEQPSYEPKEPSYDEPSYGEPSYEEPEEPYFDEPEEPEEPEEPEEPEEPHFREPAYPAY
PAYPAYPAFPRPSHKPCPSYEQPSYEQPAYEEPSYEQPSYEQHGYQTAVRPNAPYNTYQPGNEYANEPPTVSVSK
GTIVTTWAGTYVLAGLIAWFAVL
Coding >Ophio5|7520
ATGAGCAGCCTGCCTACGAGCCTACGTACGAGGAGCCCGCTTACGAGGAGCCTGCCTACACTTCTGCCGCGCCTG
TCTACACCCCGGCCGGAGCAGCCTTCCTACCCCGAGCAGCCCTCTTATGAGCCGGAGCAGCCTGCTTATCCTGAG
CAGCCCTCGTATGAGCCGGAGCAGCCCGCCTACCCCGAGCAGCCTTCTTATGAGCCGGAGCAGCCCGCCTACCCC
GAGCAGCCCTCTTACGAGCCGGAGCAGCCCGCCTACCCCGAGCAGCCCTCTTATGAGCCGGANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGGAGCAGCCCTCTTACGAGCCGAAGGAGCCCTCTTACGAGCCGGAGCAGCCCTCTTATGAGCCGAAG
GAGCCTTCCTACGATGAGCCCTCTTACGGGGAGCCTTCTTACGAAGAGCCGGAGGAGCCTTACTTCGATGAGCCT
GAGGAGCCTGAGGAGCCTGAGGAGCCCGAGGAGCCCGAGGAGCCTCACTTCCGGGAGCCTGCCTACCCTGCCTAC
CCGGCCTACCCGGCCTATCCCGCTTTCCCGAGGCCGAGCCACAAGCCCTGCCCTTCGTACGAGCAGCCGTCGTAC
GAGCAGCCTGCTTACGAGGAGCCGTCTTACGAGCAGCCGTCGTACGAGCAACACGGTTACCAAACTGCTGTCCGG
CCTAACGCTCCTTACAACACGTACCAGCCAGGAAACGAGTACGCCAATGAGCCTCCGACGGTGAGCGTCTCCAAG
GGTACAATTGTCACGACGTGGGCTGGTACCTACGTCCTCGCTGGTTTGATTGCTTGGTTCGCCGTCCTG
Transcript >Ophio5|7520
ATGAGCAGCCTGCCTACGAGCCTACGTACGAGGAGCCCGCTTACGAGGAGCCTGCCTACACTTCTGCCGCGCCTG
TCTACACCCCGGCCGGAGCAGCCTTCCTACCCCGAGCAGCCCTCTTATGAGCCGGAGCAGCCTGCTTATCCTGAG
CAGCCCTCGTATGAGCCGGAGCAGCCCGCCTACCCCGAGCAGCCTTCTTATGAGCCGGAGCAGCCCGCCTACCCC
GAGCAGCCCTCTTACGAGCCGGAGCAGCCCGCCTACCCCGAGCAGCCCTCTTATGAGCCGGANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGGAGCAGCCCTCTTACGAGCCGAAGGAGCCCTCTTACGAGCCGGAGCAGCCCTCTTATGAGCCGAAG
GAGCCTTCCTACGATGAGCCCTCTTACGGGGAGCCTTCTTACGAAGAGCCGGAGGAGCCTTACTTCGATGAGCCT
GAGGAGCCTGAGGAGCCTGAGGAGCCCGAGGAGCCCGAGGAGCCTCACTTCCGGGAGCCTGCCTACCCTGCCTAC
CCGGCCTACCCGGCCTATCCCGCTTTCCCGAGGCCGAGCCACAAGCCCTGCCCTTCGTACGAGCAGCCGTCGTAC
GAGCAGCCTGCTTACGAGGAGCCGTCTTACGAGCAGCCGTCGTACGAGCAACACGGTTACCAAACTGCTGTCCGG
CCTAACGCTCCTTACAACACGTACCAGCCAGGAAACGAGTACGCCAATGAGCCTCCGACGGTGAGCGTCTCCAAG
GGTACAATTGTCACGACGTGGGCTGGTACCTACGTCCTCGCTGGTTTGATTGCTTGGTTCGCCGTCCTGTAA
Gene >Ophio5|7520
ATGAGCAGCCTGCCTACGAGCCTACGTACGAGGAGCCCGCTTACGAGGAGCCTGCCTACACTTCTGCCGCGCCTG
TCTACACCCCGGGTCCGACGTATGAGCAGGCCCCTTACGAGCCCGAGGAGCCTACCTATGAGCCGGAGCAGCCTA
CCTACCCGCAGCAGCCTACCTACGAGCCGGAGCAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACGAGCCGGAGCAGCCTTCCT
ACCCCGAGCAGCCCTCTTATGAGCCGGAGCAGCCTGCTTATCCTGAGCAGCCCTCGTATGAGCCGGAGCAGCCCG
CCTACCCCGAGCAGCCTTCTTATGAGCCGGAGCAGCCCGCCTACCCCGAGCAGCCCTCTTACGAGCCGGAGCAGC
CCGCCTACCCCGAGCAGCCCTCTTATGAGCCGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGCAGCCCTCTTACGAGC
CGAAGGAGCCCTCTTACGAGCCGGAGCAGCCCTCTTATGAGCCGAAGGAGCCTTCCTACGATGAGCCCTCTTACG
GGGAGCCTTCTTACGAAGAGCCGGAGGAGCCTTACTTCGATGAGCCTGAGGAGCCTGAGGAGCCTGAGGAGCCCG
AGGAGCCCGAGGAGCCTCACTTCCGGGAGCCTGCCTACCCTGCCTACCCGGCCTACCCGGCCTATCCCGCTTTCC
CGAGGCCGAGCCACAAGCCCTGCCCTTCGTACGAGCAGCCGTCGTACGAGCAGCCTGCTTACGAGGAGCCGTCTT
ACGAGCAGCCGTCGTACGAGCAACACGGTTACCAAACTGCTGTCCGGCCTAACGCTCCTTACAACACGTACCAGC
CAGGAAACGAGTACGCCAATGAGCCTCCGACGGTGAGCGTCTCCAAGGGTACAATTGTCACGACGTGGGCTGGTA
CCTACGTCCTCGCTGGTTTGATTGCTTGGTTCGCCGTCCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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