Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7472
Gene name
Locationscaffold_722:4892..5553
Strand+
Gene length (bp)661
Transcript length (bp)582
Coding sequence length (bp)579
Protein length (aa) 193

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4AV66|PHIA_ARTBC Cell wall protein phiA OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=phiA PE=1 SV=1 1 191 4.0E-43
sp|A4FSH5|PHIA_ASPFM Cell wall protein phiA OS=Neosartorya fumigata GN=phiA PE=1 SV=1 28 193 3.0E-36
sp|B0Y004|PHIA_ASPFC Cell wall protein phiA OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=phiA PE=3 SV=1 28 193 3.0E-36
sp|Q5ATP7|PHIA_EMENI Cell wall protein phiA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=phiA PE=2 SV=1 25 191 4.0E-34
sp|A2R2S8|PHIA_ASPNC Cell wall protein phiA OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=phiA PE=2 SV=1 27 191 7.0E-34

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7472
MKLSNVVAIAVAAFGSVEAQTSASSATKPFQLMALRSASDIHFGQISASQSNIFVNLPDQNAVCKGKDPKSAIFY
LKDQQLYLYTGSGPVQRLFVDRSGFGQGKLGYLTGNGPVPPRFEVKGWNLRDIGKDKSSGQALYFYDKNLLACPG
GSGKGWTVWVVTDNLLPGGNQGCLGFTPRVIESVSPVACEYRH
Coding >Ophio5|7472
ATGAAGCTGTCCAACGTCGTCGCAATCGCCGTCGCAGCATTCGGTTCTGTAGAGGCCCAGACGTCGGCCTCTTCT
GCGACCAAGCCCTTCCAGCTCATGGCTCTGCGATCGGCCAGTGACATTCACTTCGGCCAGATCAGCGCCAGTCAG
AGCAACATCTTCGTCAATCTGCCCGACCAGAACGCCGTCTGCAAGGGAAAGGACCCCAAGAGTGCCATCTTTTAT
CTCAAGGACCAGCAGCTCTATCTCTACACAGGCTCCGGCCCGGTTCAGAGGCTCTTTGTCGACCGCTCCGGCTTC
GGCCAAGGCAAGCTGGGCTACCTGACCGGAAACGGCCCCGTCCCGCCGCGCTTCGAGGTCAAGGGCTGGAACCTC
AGGGATATCGGCAAAGACAAGAGCTCGGGCCAAGCCCTCTATTTCTACGACAAGAACCTGCTCGCCTGTCCCGGA
GGCTCCGGCAAGGGTTGGACCGTCTGGGTCGTGACGGACAACCTCCTCCCCGGAGGCAACCAGGGCTGCTTGGGC
TTCACCCCTCGAGTCATTGAATCCGTCAGCCCTGTGGCCTGCGAGTATCGACAC
Transcript >Ophio5|7472
ATGAAGCTGTCCAACGTCGTCGCAATCGCCGTCGCAGCATTCGGTTCTGTAGAGGCCCAGACGTCGGCCTCTTCT
GCGACCAAGCCCTTCCAGCTCATGGCTCTGCGATCGGCCAGTGACATTCACTTCGGCCAGATCAGCGCCAGTCAG
AGCAACATCTTCGTCAATCTGCCCGACCAGAACGCCGTCTGCAAGGGAAAGGACCCCAAGAGTGCCATCTTTTAT
CTCAAGGACCAGCAGCTCTATCTCTACACAGGCTCCGGCCCGGTTCAGAGGCTCTTTGTCGACCGCTCCGGCTTC
GGCCAAGGCAAGCTGGGCTACCTGACCGGAAACGGCCCCGTCCCGCCGCGCTTCGAGGTCAAGGGCTGGAACCTC
AGGGATATCGGCAAAGACAAGAGCTCGGGCCAAGCCCTCTATTTCTACGACAAGAACCTGCTCGCCTGTCCCGGA
GGCTCCGGCAAGGGTTGGACCGTCTGGGTCGTGACGGACAACCTCCTCCCCGGAGGCAACCAGGGCTGCTTGGGC
TTCACCCCTCGAGTCATTGAATCCGTCAGCCCTGTGGCCTGCGAGTATCGACACTAA
Gene >Ophio5|7472
ATGAAGCTGTCCAACGTCGTCGCAATCGCCGTCGCAGCATTCGGTTCTGTAGAGGCCCAGACGTCGGCCTCTTCT
GCGACCAAGCCCTTCCAGCTCATGGCTCTGCGATCGGCCAGTGACATTCACTTCGGCCAGATCAGCGCCAGTCAG
AGCAACATCTTCGTCAATCTGCCCGACCAGAACGCCGTCTGCAAGGGAAAGGACCCCAAGAGTGCCATCTTTTAT
CTCAAGGACCAGCAGCTCTATCTCTACACAGGCTCCGGCCCGGTTCAGAGGCTCTTTGTCGACCGCTCCGGCTTC
GGTAAGGACGCAGCTCCGTGACCTTTCCTCCGCCTCCCTGCCTATCATCCGCCCGCCGGGTGCTGACACGTTACC
CTCAGGCCAAGGCAAGCTGGGCTACCTGACCGGAAACGGCCCCGTCCCGCCGCGCTTCGAGGTCAAGGGCTGGAA
CCTCAGGGATATCGGCAAAGACAAGAGCTCGGGCCAAGCCCTCTATTTCTACGACAAGAACCTGCTCGCCTGTCC
CGGAGGCTCCGGCAAGGGTTGGACCGTCTGGGTCGTGACGGACAACCTCCTCCCCGGAGGCAACCAGGGCTGCTT
GGGCTTCACCCCTCGAGTCATTGAATCCGTCAGCCCTGTGGCCTGCGAGTATCGACACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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