Protein ID | Ophio5|7384 |
Gene name | |
Location | scaffold_709:4889..6407 |
Strand | + |
Gene length (bp) | 1518 |
Transcript length (bp) | 1125 |
Coding sequence length (bp) | 1122 |
Protein length (aa) | 374 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07992 | Pyr_redox_2 | Pyridine nucleotide-disulphide oxidoreductase | 7.3E-07 | 39 | 170 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4APQ6|TRXR_ARTBC | Probable thioredoxin reductase ARB_06224 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_06224 PE=1 SV=1 | 15 | 336 | 3.0E-80 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016491 | oxidoreductase activity | Yes |
GO:0003824 | catalytic activity | No |
GO:0003674 | molecular_function | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.27 | 0.0965 | 0.8543 | 0.0415 | 0.1435 | 0.0367 | 0.1661 | 0.163 | 0.1173 | 0.0163 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 18 | 0.999281 |
Orthofinder run ID | 4 |
Orthogroup | 544 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|7384 MRFHAWAAFLALGQTAFAAPPSPSPPPPPSPAAEPWEYEAVIVGGGPSGLSAASGLARVRRRILLLDSAVYRNGA TRHMHDVLGFDGVQPAYYRWAARKQILEYSTVKMQNGTVTRIQQIQTPSYSYFSVGYQSPTGESVNTTAAKVVLG TGLQDILPATPGFRENWGKGIYWSSNITAFVNGTDTPAMRQVTAQKTPIWTSIISRNGVTIENRTLASIERLADG GAGVHDASKPTSPELDKFKVTFTDGNSVTRDAFLVNIPNEQASTVGQDMGVQLVGGRLKADGAKGLLTNVPGVFA VGDANSDNSTNVPHALYSGKRAAVFLHVSLEREKAQRLANSGPTKRSIDEEARSVWERMNGRPGELLHAGAFDG |
Coding | >Ophio5|7384 ATGCGGTTCCACGCCTGGGCAGCGTTTTTGGCATTGGGTCAGACGGCGTTCGCGGCCCCGCCTTCGCCGTCGCCG CCGCCGCCGCCGTCGCCAGCAGCGGAGCCTTGGGAATATGAAGCCGTCATTGTCGGTGGTGGGCCTTCCGGTCTC AGTGCGGCAAGCGGGCTTGCACGCGTCCGGCGCCGGATTCTCCTCCTTGACTCGGCTGTGTATCGAAATGGGGCG ACGAGGCATATGCATGATGTGCTGGGCTTTGATGGCGTCCAGCCCGCCTACTATCGCTGGGCCGCCCGCAAACAA ATCCTCGAATACTCTACCGTCAAGATGCAAAACGGCACTGTGACGCGCATCCAACAAATCCAAACACCCAGCTAC TCATACTTTTCCGTCGGCTACCAATCCCCCACGGGCGAGTCCGTCAACACGACAGCCGCCAAGGTCGTCCTCGGC ACCGGCCTCCAAGACATCCTCCCCGCCACGCCGGGCTTCCGCGAAAACTGGGGCAAGGGCATCTATTGGAGCTCG AACATCACGGCCTTCGTCAATGGCACGGACACGCCCGCCATGCGTCAGGTGACGGCGCAGAAGACTCCCATCTGG ACCTCCATCATTTCTCGCAACGGCGTGACGATTGAAAATCGTACCCTCGCCTCCATTGAGCGCCTCGCAGACGGC GGAGCAGGCGTCCATGACGCAAGCAAGCCCACAAGCCCCGAGCTGGACAAGTTCAAAGTCACCTTTACCGACGGC AACTCAGTCACGCGCGACGCCTTTCTCGTCAACATTCCCAACGAGCAGGCCTCGACCGTGGGGCAGGACATGGGC GTTCAACTGGTCGGTGGACGGCTCAAGGCCGACGGCGCAAAGGGTCTGTTGACCAATGTGCCGGGAGTCTTTGCC GTCGGCGACGCAAACTCGGATAACTCGACCAACGTGCCGCATGCCCTGTACTCGGGGAAGCGGGCAGCCGTTTTC CTGCACGTCTCGCTAGAGCGCGAAAAAGCCCAGCGGCTGGCCAACTCGGGCCCGACGAAGCGGAGCATCGACGAA GAGGCCCGCTCCGTGTGGGAGAGGATGAATGGCCGACCGGGCGAGCTGCTGCATGCGGGAGCGTTTGACGGA |
Transcript | >Ophio5|7384 ATGCGGTTCCACGCCTGGGCAGCGTTTTTGGCATTGGGTCAGACGGCGTTCGCGGCCCCGCCTTCGCCGTCGCCG CCGCCGCCGCCGTCGCCAGCAGCGGAGCCTTGGGAATATGAAGCCGTCATTGTCGGTGGTGGGCCTTCCGGTCTC AGTGCGGCAAGCGGGCTTGCACGCGTCCGGCGCCGGATTCTCCTCCTTGACTCGGCTGTGTATCGAAATGGGGCG ACGAGGCATATGCATGATGTGCTGGGCTTTGATGGCGTCCAGCCCGCCTACTATCGCTGGGCCGCCCGCAAACAA ATCCTCGAATACTCTACCGTCAAGATGCAAAACGGCACTGTGACGCGCATCCAACAAATCCAAACACCCAGCTAC TCATACTTTTCCGTCGGCTACCAATCCCCCACGGGCGAGTCCGTCAACACGACAGCCGCCAAGGTCGTCCTCGGC ACCGGCCTCCAAGACATCCTCCCCGCCACGCCGGGCTTCCGCGAAAACTGGGGCAAGGGCATCTATTGGAGCTCG AACATCACGGCCTTCGTCAATGGCACGGACACGCCCGCCATGCGTCAGGTGACGGCGCAGAAGACTCCCATCTGG ACCTCCATCATTTCTCGCAACGGCGTGACGATTGAAAATCGTACCCTCGCCTCCATTGAGCGCCTCGCAGACGGC GGAGCAGGCGTCCATGACGCAAGCAAGCCCACAAGCCCCGAGCTGGACAAGTTCAAAGTCACCTTTACCGACGGC AACTCAGTCACGCGCGACGCCTTTCTCGTCAACATTCCCAACGAGCAGGCCTCGACCGTGGGGCAGGACATGGGC GTTCAACTGGTCGGTGGACGGCTCAAGGCCGACGGCGCAAAGGGTCTGTTGACCAATGTGCCGGGAGTCTTTGCC GTCGGCGACGCAAACTCGGATAACTCGACCAACGTGCCGCATGCCCTGTACTCGGGGAAGCGGGCAGCCGTTTTC CTGCACGTCTCGCTAGAGCGCGAAAAAGCCCAGCGGCTGGCCAACTCGGGCCCGACGAAGCGGAGCATCGACGAA GAGGCCCGCTCCGTGTGGGAGAGGATGAATGGCCGACCGGGCGAGCTGCTGCATGCGGGAGCGTTTGACGGATAA |
Gene | >Ophio5|7384 ATGCGGTTCCACGCCTGGGCAGCGTTTTTGGCATTGGGTCAGACGGCGTTCGCGGCCCCGCCTTCGCCGTCGCCG CCGCCGCCGCCGTCGCCAGCAGCGGAGCCTTGGGAATATGAAGCCGTCATTGTCGGTGGTGGGCCTTCCGGTCTC AGTGCGGCAAGCGGGCTTGCACGCGTCCGGCGCCGGATTCTCCTCCTTGACTCGGCTGTGTATCGAAATGGGGCG ACGAGGCATATGCATGATGTGCTGGGCTTTGATGGTGAGCTTTCCCCCCGTCTCTTACGCTCTGTGCTTGTTATC TGCCAAGTGTAATTCTCCTGGCTTTACACCATTAGTATCTAGCGTACGATGTGTATTAGCCTTGATGCTGTGCCA TGTCACCCTTCTTTTCTCGACCCCCTTTTCCCCCATCATGTATTGACACACCTCCCAGGCGTCCAGCCCGCCTAC TATCGCTGGGCCGCCCGCAAACAAATCCTCGAATACTCTACCGTCAAGATGCAAAACGGCACTGTGACGCGCATC CAACAAATCCAAACACCCAGCTACTCATACTTTTCCGTCGGCTACCAATCCCCCACGGGCGAGTCCGTCAACACG ACAGCCGCCAAGGTCGTCCTCGGCACCGGCCTCCAAGACATCCTCCCCGCCACGCCGGGCTTCCGCGAAAACTGG GGCAAGGGCATCTATTGGTGTCCCTGGTGTGACGGGCACGAGCACGCGGACCAGGAGCTCGGTATCATCGGCCCG CTGGACCAGGCGGCATCTACCGTGTTGGAGATTCTGACGTTGAATAAGAACATCACGGCCTTCGTCAATGGCACG GACACGCCCGCCATGCGTCAGGTGACGGCGCAGAAGACTCCCATCTGGACCTCCATCATTTCTCGCAACGGCGTG ACGATTGAAAATCGTACCCTCGCCTCCATTGAGCGCCTCGCAGACGGCGGAGCAGGCGTCCATGACGCAAGCAAG CCCACAAGCCCCGAGCTGGACAAGTTCAAAGTCACCTTTACCGACGGCAACTCAGTCACGCGCGACGCCTTTCTC GTCAACATTCCCAACGAGCAGGCCTCGACCGTGGGGCAGGACATGGGCGTTCAACTGGTCGGTGGACGGCTCAAG GCCGACGGCGCAAAGGGTCTGTTGACCAATGTGCCGGGAGTCTTTGCCGTCGGCGACGCAAACTCGGATAACTCG ACCAACGTGCCGCATGCCCTGTACTCGGGGAAGCGGGCAGCCGTTTTCCTGCACGGTAGGATTTCTCTTTTTTTT TCCCCCTTTCTTCTTCTTCGTTACTTCTTCACCCCTGTTGTTTGCTTTTTTTTTAAATTCTCTTTGTTCTTTTTA CCCTTTCATGCTAACAACGATGCAGTCTCGCTAGAGCGCGAAAAAGCCCAGCGGCTGGCCAACTCGGGCCCGACG AAGCGGAGCATCGACGAAGAGGCCCGCTCCGTGTGGGAGAGGATGAATGGCCGACCGGGCGAGCTGCTGCATGCG GGAGCGTTTGACGGATAA |