Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|737
Gene name
Locationscaffold_12:90286..91356
Strand-
Gene length (bp)1070
Transcript length (bp)822
Coding sequence length (bp)819
Protein length (aa) 273

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

Domain # Start End Length
1 58 80 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|737
MGLDLLRTLLHSTPTLLITPRPAPHSLPPTPTLRLSRVFSMTGVLSALRQEQRSERTTTTTTIVVIIIIAHLPLL
LSSLFAQRRSAAYGVVNRLRRLVRRRAREGALVLLLNSTSSSSSSSLSPSISHPSLGQSERRKTTTTTTMTTTTT
TTMMGSRSVLVPELRVAYGSVFANLVDLHLLCFPASLAFGPSPSHLAHVPVVEVLLDRFGLTPPVRGRPSLSREQ
RWVLVGLGEGHLVRHGQSVGEPRAASSPPDERPIDGQADGQAERKRCG
Coding >Ophio5|737
ATGGGGCTTGACCTCCTCCGCACCCTCCTACACTCAACACCCACCCTCCTCATCACCCCGCGTCCAGCGCCACAC
AGCCTACCGCCAACACCAACCCTACGACTATCACGCGTCTTCTCCATGACGGGCGTGCTATCAGCCCTGCGACAG
GAACAAAGGTCAGAGAGGACCACCACCACCACCACCATCGTCGTCATCATCATCATCGCCCATCTCCCCCTCCTC
CTCTCCTCCCTCTTCGCCCAGAGACGCTCCGCCGCCTACGGCGTCGTGAACAGGTTGCGGAGACTGGTCAGACGC
CGGGCGCGCGAGGGGGCTTTGGTTCTTTTGCTCAACTCTACCTCTTCATCCTCTTCCTCATCCTTGTCGCCTTCT
ATCAGCCATCCTTCTTTGGGACAGTCGGAGAGAAGGAAGACGACGACGACGACGACGATGACGACGACGACGACG
ACAACCATGATGGGTAGCAGGTCGGTGCTCGTGCCCGAGCTGAGGGTTGCCTATGGCTCGGTTTTTGCCAACCTT
GTGGATTTGCATCTCTTGTGCTTTCCTGCTTCTTTGGCCTTTGGGCCTTCTCCCTCCCACCTTGCCCATGTTCCT
GTCGTCGAGGTGCTTTTGGATCGCTTCGGCTTGACGCCCCCCGTGAGGGGCAGGCCTTCGCTTTCGAGGGAGCAG
AGGTGGGTGCTGGTCGGGCTCGGCGAAGGGCACTTGGTCCGTCATGGCCAGTCTGTCGGCGAGCCTCGAGCGGCA
TCATCTCCTCCTGACGAGAGACCAATAGATGGGCAGGCAGACGGACAGGCAGAGAGGAAGAGATGCGGC
Transcript >Ophio5|737
ATGGGGCTTGACCTCCTCCGCACCCTCCTACACTCAACACCCACCCTCCTCATCACCCCGCGTCCAGCGCCACAC
AGCCTACCGCCAACACCAACCCTACGACTATCACGCGTCTTCTCCATGACGGGCGTGCTATCAGCCCTGCGACAG
GAACAAAGGTCAGAGAGGACCACCACCACCACCACCATCGTCGTCATCATCATCATCGCCCATCTCCCCCTCCTC
CTCTCCTCCCTCTTCGCCCAGAGACGCTCCGCCGCCTACGGCGTCGTGAACAGGTTGCGGAGACTGGTCAGACGC
CGGGCGCGCGAGGGGGCTTTGGTTCTTTTGCTCAACTCTACCTCTTCATCCTCTTCCTCATCCTTGTCGCCTTCT
ATCAGCCATCCTTCTTTGGGACAGTCGGAGAGAAGGAAGACGACGACGACGACGACGATGACGACGACGACGACG
ACAACCATGATGGGTAGCAGGTCGGTGCTCGTGCCCGAGCTGAGGGTTGCCTATGGCTCGGTTTTTGCCAACCTT
GTGGATTTGCATCTCTTGTGCTTTCCTGCTTCTTTGGCCTTTGGGCCTTCTCCCTCCCACCTTGCCCATGTTCCT
GTCGTCGAGGTGCTTTTGGATCGCTTCGGCTTGACGCCCCCCGTGAGGGGCAGGCCTTCGCTTTCGAGGGAGCAG
AGGTGGGTGCTGGTCGGGCTCGGCGAAGGGCACTTGGTCCGTCATGGCCAGTCTGTCGGCGAGCCTCGAGCGGCA
TCATCTCCTCCTGACGAGAGACCAATAGATGGGCAGGCAGACGGACAGGCAGAGAGGAAGAGATGCGGCTGA
Gene >Ophio5|737
ATGGGGCTTGACGTGAGTATCCTTTTCCTCTCTCCCTCTCTCCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGGGGGGGGGGGGGGGTTGGTGAAGCATGTTTTCACGCTTGTCTCGAGTCAACACAACCCTCTCTCCTTTTTCTT
CCTCTCTCTCGCAAAAAGTACCACACATAAAGGGATATGAAGACTGACTGAATGACTGACGGATGAATGAAATGA
ATGGATGGATGGATGCATGGGGGGGAAAAAAATAGCTCCTCCGCACCCTCCTACACTCAACACCCACCCTCCTCA
TCACCCCGCGTCCAGCGCCACACAGCCTACCGCCAACACCAACCCTACGACTATCACGCGTCTTCTCCATGACGG
GCGTGCTATCAGCCCTGCGACAGGAACAAAGGTCAGAGAGGACCACCACCACCACCACCATCGTCGTCATCATCA
TCATCGCCCATCTCCCCCTCCTCCTCTCCTCCCTCTTCGCCCAGAGACGCTCCGCCGCCTACGGCGTCGTGAACA
GGTTGCGGAGACTGGTCAGACGCCGGGCGCGCGAGGGGGCTTTGGTTCTTTTGCTCAACTCTACCTCTTCATCCT
CTTCCTCATCCTTGTCGCCTTCTATCAGCCATCCTTCTTTGGGACAGTCGGAGAGAAGGAAGACGACGACGACGA
CGACGATGACGACGACGACGACGACAACCATGATGGGTAGCAGGTCGGTGCTCGTGCCCGAGCTGAGGGTTGCCT
ATGGCTCGGTTTTTGCCAACCTTGTGGATTTGCATCTCTTGTGCTTTCCTGCTTCTTTGGCCTTTGGGCCTTCTC
CCTCCCACCTTGCCCATGTTCCTGTCGTCGAGGTGCTTTTGGATCGCTTCGGCTTGACGCCCCCCGTGAGGGGCA
GGCCTTCGCTTTCGAGGGAGCAGAGGTGGGTGCTGGTCGGGCTCGGCGAAGGGCACTTGGTCCGTCATGGCCAGT
CTGTCGGCGAGCCTCGAGCGGCATCATCTCCTCCTGACGAGAGACCAATAGATGGGCAGGCAGACGGACAGGCAG
AGAGGAAGAGATGCGGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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