© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|7368 |
| Gene name | |
| Location | scaffold_704:7191..7898 |
| Strand | + |
| Gene length (bp) | 707 |
| Transcript length (bp) | 630 |
| Coding sequence length (bp) | 627 |
| Protein length (aa) | 209 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | Nuclear localization signal | 0.6153 | 0.4059 | 0.1022 | 0.3277 | 0.2058 | 0.0022 | 0.3208 | 0.2113 | 0.0405 | 0.1159 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 64 | 86 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 16302 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps kimflemingae | Ophio5|7368 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|7368 MSNQGYYSGSGGGNDQQGGFNSGSQQGNNYSQDFKDNNSGGDGDRGLGTSIVGGGAAGFAAHKAGGTGVLGTIGA AAAGAIGANMVKHHHDKNKHDKDDDKHDKHGKHGKHENYYDNDNGGSNNNQGGYGDNKHGGGSYGDNKHGGGGYG NDSYGNNNNNNQQGYGGGNGGSGGNGHHGHHGLSGLLGHHGSGGNNNEGYGGNNNQGRY |
| Coding | >Ophio5|7368 ATGTCCAACCAAGGCTACTATAGCGGCAGCGGCGGCGGCAACGACCAGCAAGGCGGCTTCAACAGCGGCTCGCAA CAGGGCAACAACTACTCCCAAGACTTCAAGGATAACAACTCCGGCGGCGATGGCGACCGCGGCCTCGGCACCTCC ATCGTCGGCGGAGGCGCAGCAGGCTTTGCGGCCCACAAAGCCGGCGGAACCGGCGTGCTCGGCACCATCGGCGCC GCCGCGGCTGGAGCCATCGGCGCCAACATGGTGAAGCACCACCACGACAAGAACAAGCACGACAAGGATGACGAC AAGCACGACAAGCACGGTAAGCACGGCAAGCACGAAAACTACTACGACAATGACAACGGCGGCAGCAACAACAAC CAGGGGGGTTACGGAGACAACAAGCACGGGGGGGGCTCGTACGGCGATAACAAGCACGGAGGAGGTGGATACGGA AACGACAGCTACGGCAACAACAACAATAACAACCAGCAGGGATACGGAGGCGGAAACGGCGGGTCCGGCGGTAAC GGACATCATGGCCATCACGGCCTGAGCGGACTGTTGGGCCACCACGGAAGCGGCGGGAACAATAACGAGGGATAC GGCGGCAACAATAACCAGGGGCGGTAT |
| Transcript | >Ophio5|7368 ATGTCCAACCAAGGCTACTATAGCGGCAGCGGCGGCGGCAACGACCAGCAAGGCGGCTTCAACAGCGGCTCGCAA CAGGGCAACAACTACTCCCAAGACTTCAAGGATAACAACTCCGGCGGCGATGGCGACCGCGGCCTCGGCACCTCC ATCGTCGGCGGAGGCGCAGCAGGCTTTGCGGCCCACAAAGCCGGCGGAACCGGCGTGCTCGGCACCATCGGCGCC GCCGCGGCTGGAGCCATCGGCGCCAACATGGTGAAGCACCACCACGACAAGAACAAGCACGACAAGGATGACGAC AAGCACGACAAGCACGGTAAGCACGGCAAGCACGAAAACTACTACGACAATGACAACGGCGGCAGCAACAACAAC CAGGGGGGTTACGGAGACAACAAGCACGGGGGGGGCTCGTACGGCGATAACAAGCACGGAGGAGGTGGATACGGA AACGACAGCTACGGCAACAACAACAATAACAACCAGCAGGGATACGGAGGCGGAAACGGCGGGTCCGGCGGTAAC GGACATCATGGCCATCACGGCCTGAGCGGACTGTTGGGCCACCACGGAAGCGGCGGGAACAATAACGAGGGATAC GGCGGCAACAATAACCAGGGGCGGTATTAG |
| Gene | >Ophio5|7368 ATGTCCAACCAAGGCTACTATAGCGGCAGCGGCGGCGGCAACGACCAGCAAGGCGGCTTCAACAGCGGCTCGCAA CAGGTGAGAGCTACAACTCGCGATTTGAATAGAAAAGAGTGTGAACAGGGTCAGGCAAACTGACCAAACCACTTC ACCAGGGCAACAACTACTCCCAAGACTTCAAGGATAACAACTCCGGCGGCGATGGCGACCGCGGCCTCGGCACCT CCATCGTCGGCGGAGGCGCAGCAGGCTTTGCGGCCCACAAAGCCGGCGGAACCGGCGTGCTCGGCACCATCGGCG CCGCCGCGGCTGGAGCCATCGGCGCCAACATGGTGAAGCACCACCACGACAAGAACAAGCACGACAAGGATGACG ACAAGCACGACAAGCACGGTAAGCACGGCAAGCACGAAAACTACTACGACAATGACAACGGCGGCAGCAACAACA ACCAGGGGGGTTACGGAGACAACAAGCACGGGGGGGGCTCGTACGGCGATAACAAGCACGGAGGAGGTGGATACG GAAACGACAGCTACGGCAACAACAACAATAACAACCAGCAGGGATACGGAGGCGGAAACGGCGGGTCCGGCGGTA ACGGACATCATGGCCATCACGGCCTGAGCGGACTGTTGGGCCACCACGGAAGCGGCGGGAACAATAACGAGGGAT ACGGCGGCAACAATAACCAGGGGCGGTATTAG |