Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7349
Gene name
Locationscaffold_70:34927..35752
Strand-
Gene length (bp)825
Transcript length (bp)825
Coding sequence length (bp)822
Protein length (aa) 274

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12296 HsbA Hydrophobic surface binding protein A 2.5E-21 20 135

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q8TG42|MP1_ASPFL Cell wall mannoprotein 1 OS=Aspergillus flavus GN=mp1 PE=2 SV=1 1 166 3.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7349
MKCSSLILACLATGAIASIEDIKQAIGNCKKGIEALDSALKGFSGNPQPIKDAAEKLVTTLQESKKKADDSEQLD
LAGALGLQEPTVALQESSKTLTSHLKQGKPQIQKGGYCKLVRQNLGSINSGSLALMEAILKKVPEDAQPIAKKLS
APLKATLEEAANEFSEQNCKDSSPDKSSAPASSSAPASSSSSPASSKPSEAPTTSEEAEPSAPATSAASSGYKVP
SGSATTPYQPTGTGIPTGATTAQPPMVTAGAAMVAPAGVLAMAAAALML
Coding >Ophio5|7349
ATGAAGTGCAGCTCTCTCATCCTGGCTTGCCTGGCTACCGGCGCCATCGCTAGCATCGAAGACATCAAGCAGGCC
ATTGGCAACTGCAAAAAGGGCATCGAAGCCCTCGACTCGGCTCTGAAGGGGTTCTCCGGAAACCCACAGCCGATC
AAGGACGCGGCCGAAAAGCTGGTGACGACTCTTCAAGAGAGCAAGAAGAAGGCGGATGATTCGGAACAGCTGGAC
CTTGCCGGCGCCCTCGGCCTCCAGGAGCCCACTGTGGCCCTTCAGGAGTCGAGCAAGACCTTGACCTCCCACCTC
AAGCAGGGCAAGCCTCAGATCCAGAAGGGCGGCTACTGCAAGCTCGTCCGCCAGAACCTCGGCTCCATCAACTCG
GGCTCCCTCGCACTCATGGAGGCCATCTTGAAGAAGGTGCCCGAGGACGCCCAGCCCATCGCCAAAAAGCTGTCG
GCACCCCTGAAGGCTACCCTCGAGGAGGCCGCCAACGAGTTCAGCGAGCAGAACTGCAAGGACTCGTCCCCTGAC
AAGAGCTCCGCCCCCGCCAGCAGCTCCGCTCCGGCCAGCAGCTCCTCCTCCCCGGCCTCGTCTAAGCCGTCCGAG
GCCCCGACCACCTCCGAGGAGGCCGAGCCCTCTGCTCCGGCCACCTCCGCTGCGTCCTCCGGATACAAGGTCCCC
TCAGGCAGCGCCACGACCCCCTACCAGCCCACCGGCACTGGCATCCCCACCGGCGCCACGACTGCCCAGCCGCCG
ATGGTCACCGCCGGCGCGGCCATGGTTGCTCCCGCCGGTGTCCTGGCCATGGCCGCCGCCGCCCTGATGCTG
Transcript >Ophio5|7349
ATGAAGTGCAGCTCTCTCATCCTGGCTTGCCTGGCTACCGGCGCCATCGCTAGCATCGAAGACATCAAGCAGGCC
ATTGGCAACTGCAAAAAGGGCATCGAAGCCCTCGACTCGGCTCTGAAGGGGTTCTCCGGAAACCCACAGCCGATC
AAGGACGCGGCCGAAAAGCTGGTGACGACTCTTCAAGAGAGCAAGAAGAAGGCGGATGATTCGGAACAGCTGGAC
CTTGCCGGCGCCCTCGGCCTCCAGGAGCCCACTGTGGCCCTTCAGGAGTCGAGCAAGACCTTGACCTCCCACCTC
AAGCAGGGCAAGCCTCAGATCCAGAAGGGCGGCTACTGCAAGCTCGTCCGCCAGAACCTCGGCTCCATCAACTCG
GGCTCCCTCGCACTCATGGAGGCCATCTTGAAGAAGGTGCCCGAGGACGCCCAGCCCATCGCCAAAAAGCTGTCG
GCACCCCTGAAGGCTACCCTCGAGGAGGCCGCCAACGAGTTCAGCGAGCAGAACTGCAAGGACTCGTCCCCTGAC
AAGAGCTCCGCCCCCGCCAGCAGCTCCGCTCCGGCCAGCAGCTCCTCCTCCCCGGCCTCGTCTAAGCCGTCCGAG
GCCCCGACCACCTCCGAGGAGGCCGAGCCCTCTGCTCCGGCCACCTCCGCTGCGTCCTCCGGATACAAGGTCCCC
TCAGGCAGCGCCACGACCCCCTACCAGCCCACCGGCACTGGCATCCCCACCGGCGCCACGACTGCCCAGCCGCCG
ATGGTCACCGCCGGCGCGGCCATGGTTGCTCCCGCCGGTGTCCTGGCCATGGCCGCCGCCGCCCTGATGCTGTAA
Gene >Ophio5|7349
ATGAAGTGCAGCTCTCTCATCCTGGCTTGCCTGGCTACCGGCGCCATCGCTAGCATCGAAGACATCAAGCAGGCC
ATTGGCAACTGCAAAAAGGGCATCGAAGCCCTCGACTCGGCTCTGAAGGGGTTCTCCGGAAACCCACAGCCGATC
AAGGACGCGGCCGAAAAGCTGGTGACGACTCTTCAAGAGAGCAAGAAGAAGGCGGATGATTCGGAACAGCTGGAC
CTTGCCGGCGCCCTCGGCCTCCAGGAGCCCACTGTGGCCCTTCAGGAGTCGAGCAAGACCTTGACCTCCCACCTC
AAGCAGGGCAAGCCTCAGATCCAGAAGGGCGGCTACTGCAAGCTCGTCCGCCAGAACCTCGGCTCCATCAACTCG
GGCTCCCTCGCACTCATGGAGGCCATCTTGAAGAAGGTGCCCGAGGACGCCCAGCCCATCGCCAAAAAGCTGTCG
GCACCCCTGAAGGCTACCCTCGAGGAGGCCGCCAACGAGTTCAGCGAGCAGAACTGCAAGGACTCGTCCCCTGAC
AAGAGCTCCGCCCCCGCCAGCAGCTCCGCTCCGGCCAGCAGCTCCTCCTCCCCGGCCTCGTCTAAGCCGTCCGAG
GCCCCGACCACCTCCGAGGAGGCCGAGCCCTCTGCTCCGGCCACCTCCGCTGCGTCCTCCGGATACAAGGTCCCC
TCAGGCAGCGCCACGACCCCCTACCAGCCCACCGGCACTGGCATCCCCACCGGCGCCACGACTGCCCAGCCGCCG
ATGGTCACCGCCGGCGCGGCCATGGTTGCTCCCGCCGGTGTCCTGGCCATGGCCGCCGCCGCCCTGATGCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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