Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7341
Gene name
Locationscaffold_70:18389..18922
Strand+
Gene length (bp)533
Transcript length (bp)411
Coding sequence length (bp)408
Protein length (aa) 136

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04828 GFA Glutathione-dependent formaldehyde-activating enzyme 7.2E-25 28 117

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016846 carbon-sulfur lyase activity Yes
GO:0003824 catalytic activity No
GO:0016829 lyase activity No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Nuclear localization signal 0.7663 0.4422 0.1958 0.0891 0.0313 0.0013 0.0148 0.153 0.0397 0.0019

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup446
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3428
Ophiocordyceps australis map64 (Brazil) OphauB2|7120
Ophiocordyceps camponoti-floridani Ophcf2|02991
Ophiocordyceps camponoti-floridani Ophcf2|05475
Ophiocordyceps camponoti-rufipedis Ophun1|3452
Ophiocordyceps camponoti-rufipedis Ophun1|5332
Ophiocordyceps kimflemingae Ophio5|2435
Ophiocordyceps kimflemingae Ophio5|7341 (this protein)
Ophiocordyceps subramaniannii Hirsu2|7957

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7341
MPLTGHCLCKAVTYSIDIDEPIMTGYDHCDDCQRQTGSTYSLVTVVPREKFTIKGNVKRWAGKGSSGKPVYRVFC
PECGSPIAHEPDANTAISVIKAGTLDTELKKNLKPSVEIWTAGKLPFCQEKLAKAFEHMPQ
Coding >Ophio5|7341
ATGCCGCTTACCGGACATTGCCTTTGCAAGGCTGTTACCTACTCGATCGATATCGACGAGCCTATCATGACGGGT
TATGATCATTGCGACGATTGTCAGCGTCAGACCGGTTCAACATACTCTCTGGTGACCGTCGTGCCCAGGGAAAAG
TTCACGATCAAGGGCAATGTCAAGCGGTGGGCCGGCAAGGGCTCCTCGGGCAAGCCCGTCTACCGTGTTTTCTGC
CCCGAATGCGGCTCTCCTATCGCACACGAACCCGATGCCAACACGGCCATTAGCGTGATCAAAGCCGGCACGCTC
GATACTGAATTGAAGAAGAACCTCAAACCGAGCGTTGAGATATGGACGGCTGGCAAGCTGCCCTTCTGTCAAGAG
AAGCTTGCCAAGGCCTTCGAGCATATGCCCCAG
Transcript >Ophio5|7341
ATGCCGCTTACCGGACATTGCCTTTGCAAGGCTGTTACCTACTCGATCGATATCGACGAGCCTATCATGACGGGT
TATGATCATTGCGACGATTGTCAGCGTCAGACCGGTTCAACATACTCTCTGGTGACCGTCGTGCCCAGGGAAAAG
TTCACGATCAAGGGCAATGTCAAGCGGTGGGCCGGCAAGGGCTCCTCGGGCAAGCCCGTCTACCGTGTTTTCTGC
CCCGAATGCGGCTCTCCTATCGCACACGAACCCGATGCCAACACGGCCATTAGCGTGATCAAAGCCGGCACGCTC
GATACTGAATTGAAGAAGAACCTCAAACCGAGCGTTGAGATATGGACGGCTGGCAAGCTGCCCTTCTGTCAAGAG
AAGCTTGCCAAGGCCTTCGAGCATATGCCCCAGTAA
Gene >Ophio5|7341
ATGCCGCTTACCGGACATTGCCTTTGCAAGGCTGTTACCTACTCGATCGATATCGACGAGCCTATCATGACGGGT
TATGATCATTGCGACGATTGTCAGCGTCAGACCGGTTCAACATACTGTGCGTGTCTCTTCCTTGTCATCTTCCTT
GCACCTCAGCTCTAATCATGACTCATTCCCCAGCTCTGGTGACCGTCGTGCCCAGGGAAAAGTTCACGATCAAGG
GCAATGTCAAGCGGTGGGCCGGCAAGGGCTCCTCGGGCAAGCCCGTCTACCGTGTTTTCTGCCCCGAATGCGGCT
CTCCTATCGCACACGAACCCGATGCCAACACGGCCATTAGCGTGATCAAAGCCGGCACGCTCGATACTGAATTGA
AGAAGAACCTCAAACCGGTTCGTCGACGACTGGCTTCTTGCAAATAACGAGGAAAAGATTGGCTAATATTGCTGC
AGAGCGTTGAGATATGGACGGCTGGCAAGCTGCCCTTCTGTCAAGAGAAGCTTGCCAAGGCCTTCGAGCATATGC
CCCAGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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