© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|7335 |
| Gene name | |
| Location | scaffold_70:231..1198 |
| Strand | + |
| Gene length (bp) | 967 |
| Transcript length (bp) | 801 |
| Coding sequence length (bp) | 798 |
| Protein length (aa) | 266 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01753 | zf-MYND | MYND finger | 4.0E-11 | 40 | 80 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D3ZKV9|MSS51_RAT | Putative protein MSS51 homolog, mitochondrial OS=Rattus norvegicus GN=Mss51 PE=3 SV=1 | 10 | 84 | 1.0E-06 |
| sp|Q4VC12|MSS51_HUMAN | Putative protein MSS51 homolog, mitochondrial OS=Homo sapiens GN=MSS51 PE=1 SV=2 | 40 | 84 | 3.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|7335 MPVFLGVLRLPRFEGVTQRKLDGTKERIFRTKLIIMAPECIHCKKSPPEVKLRNCAKCSSALYCSRDCQKADWKA HKKICGKNRDGPTTTTKGLETVIDNPFTRLENRTWLHDRSEKDVYGLLIDAYRLRVEDMYSFEGEADMDSIYGGA PNGLRGFRRFLQRVEKSSGLMPPWWDADKKKECEALGMSSSQWHDLQCAVEKSDIVDHYGNPQFPMQLRMFAELV YGRAPGGTSGTAMRQLLMAMENGTNGGTYSHLDVSAGPGRQ |
| Coding | >Ophio5|7335 ATGCCGGTCTTCCTAGGCGTTCTTCGGCTGCCCAGGTTCGAAGGAGTAACCCAGAGGAAGCTAGACGGCACGAAA GAAAGGATTTTTCGGACGAAATTGATCATCATGGCCCCGGAATGCATTCACTGCAAGAAGTCGCCGCCTGAAGTC AAGCTCAGGAATTGCGCGAAATGTTCCTCGGCGCTCTACTGCTCCCGGGATTGCCAGAAGGCAGACTGGAAGGCT CATAAGAAAATTTGCGGCAAAAATCGAGATGGGCCGACAACGACAACAAAGGGATTGGAAACTGTCATCGATAAC CCCTTTACGCGTCTCGAGAATCGCACTTGGCTCCATGATCGATCGGAAAAAGACGTCTACGGCTTGCTGATCGAC GCCTACCGACTTCGAGTCGAAGACATGTACAGCTTCGAAGGCGAGGCAGACATGGATAGCATCTATGGTGGTGCG CCAAACGGGTTGCGTGGCTTCCGGCGCTTCCTGCAGCGCGTCGAGAAATCCTCCGGCCTAATGCCGCCGTGGTGG GATGCCGACAAGAAGAAAGAGTGTGAGGCACTGGGTATGAGTTCATCGCAATGGCATGACCTGCAATGCGCAGTG GAAAAGAGCGACATCGTGGACCATTATGGAAATCCTCAATTCCCGATGCAGCTTCGCATGTTTGCCGAGCTCGTC TATGGTCGAGCTCCGGGCGGGACGAGTGGAACGGCGATGAGGCAACTTCTGATGGCCATGGAGAACGGCACGAAC GGGGGAACGTATTCGCATCTGGACGTGTCAGCCGGCCCTGGTCGGCAG |
| Transcript | >Ophio5|7335 ATGCCGGTCTTCCTAGGCGTTCTTCGGCTGCCCAGGTTCGAAGGAGTAACCCAGAGGAAGCTAGACGGCACGAAA GAAAGGATTTTTCGGACGAAATTGATCATCATGGCCCCGGAATGCATTCACTGCAAGAAGTCGCCGCCTGAAGTC AAGCTCAGGAATTGCGCGAAATGTTCCTCGGCGCTCTACTGCTCCCGGGATTGCCAGAAGGCAGACTGGAAGGCT CATAAGAAAATTTGCGGCAAAAATCGAGATGGGCCGACAACGACAACAAAGGGATTGGAAACTGTCATCGATAAC CCCTTTACGCGTCTCGAGAATCGCACTTGGCTCCATGATCGATCGGAAAAAGACGTCTACGGCTTGCTGATCGAC GCCTACCGACTTCGAGTCGAAGACATGTACAGCTTCGAAGGCGAGGCAGACATGGATAGCATCTATGGTGGTGCG CCAAACGGGTTGCGTGGCTTCCGGCGCTTCCTGCAGCGCGTCGAGAAATCCTCCGGCCTAATGCCGCCGTGGTGG GATGCCGACAAGAAGAAAGAGTGTGAGGCACTGGGTATGAGTTCATCGCAATGGCATGACCTGCAATGCGCAGTG GAAAAGAGCGACATCGTGGACCATTATGGAAATCCTCAATTCCCGATGCAGCTTCGCATGTTTGCCGAGCTCGTC TATGGTCGAGCTCCGGGCGGGACGAGTGGAACGGCGATGAGGCAACTTCTGATGGCCATGGAGAACGGCACGAAC GGGGGAACGTATTCGCATCTGGACGTGTCAGCCGGCCCTGGTCGGCAGTGA |
| Gene | >Ophio5|7335 ATGCCGGTCTTCCTAGGCGTTCTTCGGCTGCCCAGGTTCTTTAAACCTCATGGCTGCCTAGGTATATAAGCCCGC CTAGATAGATTATAACCACCTTCAATTATCACCTGCCCGTATCCGCTGTCTAGCACATCCTATCTAGGTTCGAAG GAGTAACGTAAGCACCCCAAGCTGCAAGGTGTCACGCCGCACTAACCACACTCTTTTCCCTTTTAGCCAGAGGAA GCTAGACGGCACGAAAGAAAGGATTTTTCGGACGAAATTGATCATCATGGCCCCGGAATGCATTCACTGCAAGAA GTCGCCGCCTGAAGTCAAGCTCAGGAATTGCGCGAAATGTTCCTCGGCGCTCTACTGCTCCCGGGATTGCCAGAA GGCAGACTGGAAGGCTCATAAGAAAATTTGCGGCAAAAATCGAGATGGGCCGACAACGACAACAAAGGGATTGGA AACTGTCATCGATAACCCCTTTACGCGTCTCGAGAATCGCACTTGGCTCCATGATCGATCGGAAAAAGACGTCTA CGGCTTGCTGATCGACGCCTACCGACTTCGAGTCGAAGACATGTACAGCTTCGAAGGCGAGGCAGACATGGATAG CATCTATGGTGGTGCGCCAAACGGGTTGCGTGGCTTCCGGCGCTTCCTGCAGCGCGTCGAGAAATCCTCCGGCCT AATGCCGCCGTGGTGGGATGCCGACAAGAAGAAAGAGTGTGAGGCACTGGGTATGAGTTCATCGCAATGGCATGA CCTGCAATGCGCAGTGGAAAAGAGCGACATCGTGGACCATTATGGAAATCCTCAATTCCCGATGCAGCTTCGCAT GTTTGCCGAGCTCGTCTATGGTCGAGCTCCGGGCGGGACGAGTGGAACGGCGATGAGGCAACTTCTGATGGCCAT GGAGAACGGCACGAACGGGGGAACGTATTCGCATCTGGACGTGTCAGCCGGCCCTGGTCGGCAGTGA |