Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7319
Gene name
Locationscaffold_7:66868..67747
Strand+
Gene length (bp)879
Transcript length (bp)879
Coding sequence length (bp)876
Protein length (aa) 292

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01375 Enterotoxin_a Heat-labile enterotoxin alpha chain 7.0E-14 29 145

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|A2PU44|CHELT_VIBCL NAD(+)--arginine ADP-ribosyltransferase Chelt OS=Vibrio cholerae GN=A51_B1772 PE=1 SV=1 6 150 6.0E-11
sp|P43530|ELAH_ECOH1 Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1 12 143 2.0E-10
sp|P06717|ELAP_ECOLX Heat-labile enterotoxin A chain OS=Escherichia coli GN=eltA PE=1 SV=1 12 143 3.0E-10
sp|P01555|CHTA_VIBCH Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 9 144 3.0E-10
sp|P43528|E2BA_ECOLX Heat-labile enterotoxin IIB, A chain OS=Escherichia coli PE=1 SV=2 10 143 5.0E-08

GO

GO Term Description Terminal node
GO:0090729 toxin activity Yes
GO:0005615 extracellular space Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7319
MLSHRLSPLVALVFLFFGTCDPASPPGQSSDYVFRSDKRSPSEIEAAGGFYPHSETNYTNPRAYSLESHVNGRDY
AAYVSTSRSFDAAVAFEDDADRFIYRIRITPNMIDLDGVPFTHPYGQQMEISALGGIPWSATQAWMEVQASNGEL
GSGSEFGSGSGSGSGFQNSFSLEQFEQGCTENPIYVSQGHLGVTAQTVMTDSDAAILAAQHPGPATMAAAIRFMN
NHGSTVGWETDQQFPLRPLPLPIPTGTGETFPYNVWRAEEGSGGTPIPHQEVGAAIDSDGRQNLVEW
Coding >Ophio5|7319
ATGCTTTCTCATCGTCTATCACCTCTTGTTGCCCTTGTCTTCCTCTTCTTTGGCACATGCGACCCGGCTTCCCCG
CCCGGCCAGTCATCAGACTACGTCTTCCGATCAGATAAGAGGAGTCCGTCGGAGATTGAAGCAGCGGGGGGGTTT
TATCCTCATAGTGAGACTAACTATACCAATCCCCGTGCATACAGCCTCGAAAGTCATGTCAATGGCAGAGACTAC
GCAGCATACGTGTCGACGTCGAGAAGCTTTGACGCGGCGGTGGCCTTCGAAGACGACGCGGATAGGTTTATCTAC
AGAATACGCATTACTCCGAATATGATTGATTTAGATGGCGTGCCATTCACCCACCCGTACGGTCAACAAATGGAA
ATTAGCGCCTTGGGAGGCATTCCGTGGAGTGCTACTCAAGCTTGGATGGAAGTCCAGGCAAGCAATGGCGAACTT
GGATCCGGGTCCGAGTTCGGGTCCGGGTCCGGGTCCGGATCTGGATTCCAAAACTCCTTCAGTCTGGAGCAATTT
GAGCAAGGGTGCACTGAAAACCCTATCTACGTTAGCCAAGGTCATCTTGGGGTTACTGCACAGACGGTGATGACA
GACAGCGACGCCGCCATCCTAGCAGCTCAACACCCAGGTCCCGCCACCATGGCAGCCGCGATAAGATTTATGAAC
AATCACGGTTCGACCGTGGGGTGGGAGACCGACCAGCAGTTCCCTTTGCGACCACTACCACTCCCGATACCTACA
GGAACCGGCGAAACATTTCCCTACAACGTATGGCGCGCAGAGGAGGGAAGTGGTGGGACACCGATCCCGCATCAA
GAAGTGGGCGCGGCAATTGATAGCGATGGTAGGCAAAATCTCGTCGAATGG
Transcript >Ophio5|7319
ATGCTTTCTCATCGTCTATCACCTCTTGTTGCCCTTGTCTTCCTCTTCTTTGGCACATGCGACCCGGCTTCCCCG
CCCGGCCAGTCATCAGACTACGTCTTCCGATCAGATAAGAGGAGTCCGTCGGAGATTGAAGCAGCGGGGGGGTTT
TATCCTCATAGTGAGACTAACTATACCAATCCCCGTGCATACAGCCTCGAAAGTCATGTCAATGGCAGAGACTAC
GCAGCATACGTGTCGACGTCGAGAAGCTTTGACGCGGCGGTGGCCTTCGAAGACGACGCGGATAGGTTTATCTAC
AGAATACGCATTACTCCGAATATGATTGATTTAGATGGCGTGCCATTCACCCACCCGTACGGTCAACAAATGGAA
ATTAGCGCCTTGGGAGGCATTCCGTGGAGTGCTACTCAAGCTTGGATGGAAGTCCAGGCAAGCAATGGCGAACTT
GGATCCGGGTCCGAGTTCGGGTCCGGGTCCGGGTCCGGATCTGGATTCCAAAACTCCTTCAGTCTGGAGCAATTT
GAGCAAGGGTGCACTGAAAACCCTATCTACGTTAGCCAAGGTCATCTTGGGGTTACTGCACAGACGGTGATGACA
GACAGCGACGCCGCCATCCTAGCAGCTCAACACCCAGGTCCCGCCACCATGGCAGCCGCGATAAGATTTATGAAC
AATCACGGTTCGACCGTGGGGTGGGAGACCGACCAGCAGTTCCCTTTGCGACCACTACCACTCCCGATACCTACA
GGAACCGGCGAAACATTTCCCTACAACGTATGGCGCGCAGAGGAGGGAAGTGGTGGGACACCGATCCCGCATCAA
GAAGTGGGCGCGGCAATTGATAGCGATGGTAGGCAAAATCTCGTCGAATGGTAG
Gene >Ophio5|7319
ATGCTTTCTCATCGTCTATCACCTCTTGTTGCCCTTGTCTTCCTCTTCTTTGGCACATGCGACCCGGCTTCCCCG
CCCGGCCAGTCATCAGACTACGTCTTCCGATCAGATAAGAGGAGTCCGTCGGAGATTGAAGCAGCGGGGGGGTTT
TATCCTCATAGTGAGACTAACTATACCAATCCCCGTGCATACAGCCTCGAAAGTCATGTCAATGGCAGAGACTAC
GCAGCATACGTGTCGACGTCGAGAAGCTTTGACGCGGCGGTGGCCTTCGAAGACGACGCGGATAGGTTTATCTAC
AGAATACGCATTACTCCGAATATGATTGATTTAGATGGCGTGCCATTCACCCACCCGTACGGTCAACAAATGGAA
ATTAGCGCCTTGGGAGGCATTCCGTGGAGTGCTACTCAAGCTTGGATGGAAGTCCAGGCAAGCAATGGCGAACTT
GGATCCGGGTCCGAGTTCGGGTCCGGGTCCGGGTCCGGATCTGGATTCCAAAACTCCTTCAGTCTGGAGCAATTT
GAGCAAGGGTGCACTGAAAACCCTATCTACGTTAGCCAAGGTCATCTTGGGGTTACTGCACAGACGGTGATGACA
GACAGCGACGCCGCCATCCTAGCAGCTCAACACCCAGGTCCCGCCACCATGGCAGCCGCGATAAGATTTATGAAC
AATCACGGTTCGACCGTGGGGTGGGAGACCGACCAGCAGTTCCCTTTGCGACCACTACCACTCCCGATACCTACA
GGAACCGGCGAAACATTTCCCTACAACGTATGGCGCGCAGAGGAGGGAAGTGGTGGGACACCGATCCCGCATCAA
GAAGTGGGCGCGGCAATTGATAGCGATGGTAGGCAAAATCTCGTCGAATGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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