Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|731
Gene name
Locationscaffold_12:57921..58907
Strand-
Gene length (bp)986
Transcript length (bp)816
Coding sequence length (bp)813
Protein length (aa) 271

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05730 CFEM CFEM domain 1.2E-05 23 87

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 189 211 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|731
MGRLAPLVAIAVLAVSQAAAQNTDTPPCIPECANQVRSDFAKFSCQNANDATCLCNKDNFSFGVRDCGAHCGAND
DNVRRFLLGSFCAGVFSTQSPSQAQATPTTSATLSSATSSSPTSTQPSSTPASSTTQQTSSSPTVASSTQAALTS
SSTTSASETSSGVADVPPSATSTQAEVSGSTTGPSQASVIGIGVGVGAAVVALAGLVICLMLRGRKQKPRQSMEI
SKPLPGSGRAYAGRERNSFEKHGNDIEMTSHRYEDMVPRQQPRTMV
Coding >Ophio5|731
ATGGGCCGTCTCGCGCCGCTCGTCGCCATTGCCGTCTTGGCCGTTTCGCAAGCTGCTGCTCAGAACACAGATACG
CCACCGTGCATTCCAGAATGCGCCAACCAAGTGAGGAGCGATTTCGCCAAGTTCAGCTGTCAAAACGCCAATGAT
GCCACCTGCTTGTGCAACAAGGACAACTTTTCATTCGGTGTTCGCGATTGTGGCGCCCACTGCGGCGCCAATGAC
GACAACGTCCGCCGTTTTCTGCTTGGTTCCTTCTGCGCAGGTGTCTTCTCTACCCAGTCTCCCTCTCAAGCCCAG
GCCACTCCCACCACCTCGGCCACCTTGAGCTCCGCCACGTCGAGCTCACCGACCTCTACGCAACCGTCGTCTACC
CCGGCCTCGTCTACGACGCAACAGACTTCATCGTCGCCTACGGTTGCGTCTTCAACCCAGGCCGCCTTGACATCA
AGTTCGACGACTTCTGCCTCGGAAACGTCGTCGGGTGTGGCCGATGTCCCTCCTAGCGCCACGTCCACTCAGGCC
GAAGTGAGCGGCTCGACAACTGGCCCGTCCCAGGCCTCCGTCATTGGCATCGGCGTTGGCGTGGGAGCTGCTGTC
GTCGCTCTCGCAGGCCTAGTCATCTGTCTCATGCTCCGCGGCCGCAAGCAAAAACCCCGGCAGTCGATGGAAATC
TCCAAGCCGCTGCCTGGCTCCGGCCGGGCTTATGCGGGCCGTGAACGCAACTCGTTTGAGAAGCACGGCAACGAC
ATCGAAATGACGTCGCACCGCTACGAAGACATGGTGCCCCGCCAGCAGCCCAGAACCATGGTT
Transcript >Ophio5|731
ATGGGCCGTCTCGCGCCGCTCGTCGCCATTGCCGTCTTGGCCGTTTCGCAAGCTGCTGCTCAGAACACAGATACG
CCACCGTGCATTCCAGAATGCGCCAACCAAGTGAGGAGCGATTTCGCCAAGTTCAGCTGTCAAAACGCCAATGAT
GCCACCTGCTTGTGCAACAAGGACAACTTTTCATTCGGTGTTCGCGATTGTGGCGCCCACTGCGGCGCCAATGAC
GACAACGTCCGCCGTTTTCTGCTTGGTTCCTTCTGCGCAGGTGTCTTCTCTACCCAGTCTCCCTCTCAAGCCCAG
GCCACTCCCACCACCTCGGCCACCTTGAGCTCCGCCACGTCGAGCTCACCGACCTCTACGCAACCGTCGTCTACC
CCGGCCTCGTCTACGACGCAACAGACTTCATCGTCGCCTACGGTTGCGTCTTCAACCCAGGCCGCCTTGACATCA
AGTTCGACGACTTCTGCCTCGGAAACGTCGTCGGGTGTGGCCGATGTCCCTCCTAGCGCCACGTCCACTCAGGCC
GAAGTGAGCGGCTCGACAACTGGCCCGTCCCAGGCCTCCGTCATTGGCATCGGCGTTGGCGTGGGAGCTGCTGTC
GTCGCTCTCGCAGGCCTAGTCATCTGTCTCATGCTCCGCGGCCGCAAGCAAAAACCCCGGCAGTCGATGGAAATC
TCCAAGCCGCTGCCTGGCTCCGGCCGGGCTTATGCGGGCCGTGAACGCAACTCGTTTGAGAAGCACGGCAACGAC
ATCGAAATGACGTCGCACCGCTACGAAGACATGGTGCCCCGCCAGCAGCCCAGAACCATGGTTTGA
Gene >Ophio5|731
ATGGGCCGTCTCGCGCCGCTCGTCGCCATTGCCGTCTTGGCCGTTTCGCAAGCTGCTGCTCAGAACACAGATACG
CCACCGTGCATTGTAAGTCTCGCCGCTCATCAAGTCGGATTATTACCTGCACTGACACTCGTCACCTCCCTCACC
AACAGCCAGAATGCGCCAACCAAGTGAGGAGCGATTTCGCCAAGTTCAGCTGTCAAAACGCCAATGATGCCACCT
GCTTGTGCAACAAGGACAACTTTTCATTCGGTGTTCGCGATTGTGGCGCCCACTGCGGCGCCAATGACGACAACG
TCCGCCGTTTTCTGCTTGGTTCCTTCTGCGCAGGTAATGAATATGGCGTCGTATCTGCTCTTGGCTCCAATTGAC
GCCGGCCAGGTGTCTTCTCTACCCAGTCTCCCTCTCAAGCCCAGGCCACTCCCACCACCTCGGCCACCTTGAGCT
CCGCCACGTCGAGCTCACCGACCTCTACGCAACCGTCGTCTACCCCGGCCTCGTCTACGACGCAACAGACTTCAT
CGTCGCCTACGGTTGCGTCTTCAACCCAGGCCGCCTTGACATCAAGTGTGAGTCAGCAGGATGACCGTGATTCCT
GACCCAGCTAAAATATCCGCTAGTCGACGACTTCTGCCTCGGAAACGTCGTCGGGTGTGGCCGATGTCCCTCCTA
GCGCCACGTCCACTCAGGCCGAAGTGAGCGGCTCGACAACTGGCCCGTCCCAGGCCTCCGTCATTGGCATCGGCG
TTGGCGTGGGAGCTGCTGTCGTCGCTCTCGCAGGCCTAGTCATCTGTCTCATGCTCCGCGGCCGCAAGCAAAAAC
CCCGGCAGTCGATGGAAATCTCCAAGCCGCTGCCTGGCTCCGGCCGGGCTTATGCGGGCCGTGAACGCAACTCGT
TTGAGAAGCACGGCAACGACATCGAAATGACGTCGCACCGCTACGAAGACATGGTGCCCCGCCAGCAGCCCAGAA
CCATGGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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