Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7302
Gene name
Locationscaffold_7:18024..19287
Strand-
Gene length (bp)1263
Transcript length (bp)1263
Coding sequence length (bp)1260
Protein length (aa) 420

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14388 DUF4419 Domain of unknown function (DUF4419) 1.4E-91 85 384

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q5UQ60|YL662_MIMIV Uncharacterized protein L662 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L662 PE=4 SV=1 94 370 4.0E-12

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7302
MTRTLLLLALGLSTSLVSADIFVPVSTVRPLPLPESGWASTAMDLFEKSCPEEIQPGGAKVIVSSYSDKPHNLAI
SNNKVFPSSDSLVRGAIDAWAHHQHLVLRPDVVWFEILAQLNLYMTKHAEELRHLFVDFQGQQEIEVWDFTWQSV
IDSFKSEMQKRVKTNWLEKWITPGFSTSTANDNTTSTVLMMGLMQQYFKFTGGIICGLPSVRLLGTEADWQALLD
KLEKLRYFGVEPVQYAKRLRPILSMFIQTFRTPESPDVKRFWTQIVRADKVFSCGAGPMEYDVSGWITGFLHWTS
NGELLVPAGTPVRGDEVKLQGISYYSASLNSLPVGYAKAPLKMLNYPTKGTNSMAYVLAGNLGIARAEDRSTGVQ
SQPLSAWFLYGPVDVNATSQAFGNGDELFGIFHGLRDNCYRGARE
Coding >Ophio5|7302
ATGACTCGAACGCTGCTGCTGCTCGCCCTCGGGCTGTCGACGAGCCTGGTGAGTGCCGACATTTTCGTGCCCGTC
AGCACCGTCCGGCCTCTGCCCCTGCCAGAGTCCGGCTGGGCATCGACGGCCATGGATCTCTTCGAAAAGAGCTGC
CCCGAGGAGATTCAACCCGGCGGCGCAAAGGTCATCGTTTCCTCTTACTCGGACAAGCCGCACAACCTGGCCATC
TCTAATAACAAGGTGTTCCCCTCGTCCGACAGTCTGGTGCGAGGCGCCATCGATGCGTGGGCGCACCACCAGCAC
CTCGTGCTGCGGCCCGACGTCGTCTGGTTCGAGATTCTTGCTCAGCTCAACCTGTACATGACCAAGCATGCCGAG
GAGTTGCGTCATTTGTTTGTCGACTTCCAGGGTCAGCAGGAGATTGAGGTATGGGACTTCACTTGGCAGTCCGTC
ATCGACAGCTTCAAGTCGGAGATGCAGAAGAGGGTGAAGACGAATTGGCTAGAGAAATGGATCACACCGGGCTTC
TCGACCAGCACGGCCAACGACAACACGACGTCGACGGTGCTCATGATGGGCCTCATGCAGCAGTATTTCAAGTTC
ACCGGCGGTATCATTTGCGGCCTGCCGTCGGTCCGTCTCCTCGGTACCGAGGCTGACTGGCAGGCACTGCTCGAC
AAGCTGGAGAAGCTACGATACTTTGGCGTCGAACCGGTGCAATACGCCAAGAGGCTGCGGCCCATCTTGAGCATG
TTCATCCAGACGTTCCGCACTCCAGAGAGCCCTGATGTCAAGAGGTTTTGGACACAAATCGTCCGCGCCGACAAG
GTCTTCTCCTGCGGCGCGGGACCGATGGAGTACGACGTCTCGGGCTGGATCACGGGCTTCCTGCACTGGACCTCC
AACGGCGAGCTGCTTGTGCCGGCGGGAACGCCAGTCCGAGGCGACGAGGTGAAGCTCCAAGGCATCTCCTATTAT
AGCGCCAGCCTCAACTCGCTGCCCGTGGGATACGCCAAGGCGCCGCTCAAGATGCTCAACTACCCGACCAAGGGG
ACCAACAGCATGGCGTATGTGTTGGCTGGCAACCTCGGAATTGCCAGGGCAGAGGACAGAAGTACGGGTGTGCAG
TCGCAGCCGCTCAGTGCCTGGTTCCTCTACGGGCCGGTCGACGTCAATGCCACGTCGCAAGCTTTCGGTAACGGA
GACGAGCTCTTTGGCATCTTCCACGGCCTTCGGGATAATTGTTATAGGGGCGCTCGCGAA
Transcript >Ophio5|7302
ATGACTCGAACGCTGCTGCTGCTCGCCCTCGGGCTGTCGACGAGCCTGGTGAGTGCCGACATTTTCGTGCCCGTC
AGCACCGTCCGGCCTCTGCCCCTGCCAGAGTCCGGCTGGGCATCGACGGCCATGGATCTCTTCGAAAAGAGCTGC
CCCGAGGAGATTCAACCCGGCGGCGCAAAGGTCATCGTTTCCTCTTACTCGGACAAGCCGCACAACCTGGCCATC
TCTAATAACAAGGTGTTCCCCTCGTCCGACAGTCTGGTGCGAGGCGCCATCGATGCGTGGGCGCACCACCAGCAC
CTCGTGCTGCGGCCCGACGTCGTCTGGTTCGAGATTCTTGCTCAGCTCAACCTGTACATGACCAAGCATGCCGAG
GAGTTGCGTCATTTGTTTGTCGACTTCCAGGGTCAGCAGGAGATTGAGGTATGGGACTTCACTTGGCAGTCCGTC
ATCGACAGCTTCAAGTCGGAGATGCAGAAGAGGGTGAAGACGAATTGGCTAGAGAAATGGATCACACCGGGCTTC
TCGACCAGCACGGCCAACGACAACACGACGTCGACGGTGCTCATGATGGGCCTCATGCAGCAGTATTTCAAGTTC
ACCGGCGGTATCATTTGCGGCCTGCCGTCGGTCCGTCTCCTCGGTACCGAGGCTGACTGGCAGGCACTGCTCGAC
AAGCTGGAGAAGCTACGATACTTTGGCGTCGAACCGGTGCAATACGCCAAGAGGCTGCGGCCCATCTTGAGCATG
TTCATCCAGACGTTCCGCACTCCAGAGAGCCCTGATGTCAAGAGGTTTTGGACACAAATCGTCCGCGCCGACAAG
GTCTTCTCCTGCGGCGCGGGACCGATGGAGTACGACGTCTCGGGCTGGATCACGGGCTTCCTGCACTGGACCTCC
AACGGCGAGCTGCTTGTGCCGGCGGGAACGCCAGTCCGAGGCGACGAGGTGAAGCTCCAAGGCATCTCCTATTAT
AGCGCCAGCCTCAACTCGCTGCCCGTGGGATACGCCAAGGCGCCGCTCAAGATGCTCAACTACCCGACCAAGGGG
ACCAACAGCATGGCGTATGTGTTGGCTGGCAACCTCGGAATTGCCAGGGCAGAGGACAGAAGTACGGGTGTGCAG
TCGCAGCCGCTCAGTGCCTGGTTCCTCTACGGGCCGGTCGACGTCAATGCCACGTCGCAAGCTTTCGGTAACGGA
GACGAGCTCTTTGGCATCTTCCACGGCCTTCGGGATAATTGTTATAGGGGCGCTCGCGAATGA
Gene >Ophio5|7302
ATGACTCGAACGCTGCTGCTGCTCGCCCTCGGGCTGTCGACGAGCCTGGTGAGTGCCGACATTTTCGTGCCCGTC
AGCACCGTCCGGCCTCTGCCCCTGCCAGAGTCCGGCTGGGCATCGACGGCCATGGATCTCTTCGAAAAGAGCTGC
CCCGAGGAGATTCAACCCGGCGGCGCAAAGGTCATCGTTTCCTCTTACTCGGACAAGCCGCACAACCTGGCCATC
TCTAATAACAAGGTGTTCCCCTCGTCCGACAGTCTGGTGCGAGGCGCCATCGATGCGTGGGCGCACCACCAGCAC
CTCGTGCTGCGGCCCGACGTCGTCTGGTTCGAGATTCTTGCTCAGCTCAACCTGTACATGACCAAGCATGCCGAG
GAGTTGCGTCATTTGTTTGTCGACTTCCAGGGTCAGCAGGAGATTGAGGTATGGGACTTCACTTGGCAGTCCGTC
ATCGACAGCTTCAAGTCGGAGATGCAGAAGAGGGTGAAGACGAATTGGCTAGAGAAATGGATCACACCGGGCTTC
TCGACCAGCACGGCCAACGACAACACGACGTCGACGGTGCTCATGATGGGCCTCATGCAGCAGTATTTCAAGTTC
ACCGGCGGTATCATTTGCGGCCTGCCGTCGGTCCGTCTCCTCGGTACCGAGGCTGACTGGCAGGCACTGCTCGAC
AAGCTGGAGAAGCTACGATACTTTGGCGTCGAACCGGTGCAATACGCCAAGAGGCTGCGGCCCATCTTGAGCATG
TTCATCCAGACGTTCCGCACTCCAGAGAGCCCTGATGTCAAGAGGTTTTGGACACAAATCGTCCGCGCCGACAAG
GTCTTCTCCTGCGGCGCGGGACCGATGGAGTACGACGTCTCGGGCTGGATCACGGGCTTCCTGCACTGGACCTCC
AACGGCGAGCTGCTTGTGCCGGCGGGAACGCCAGTCCGAGGCGACGAGGTGAAGCTCCAAGGCATCTCCTATTAT
AGCGCCAGCCTCAACTCGCTGCCCGTGGGATACGCCAAGGCGCCGCTCAAGATGCTCAACTACCCGACCAAGGGG
ACCAACAGCATGGCGTATGTGTTGGCTGGCAACCTCGGAATTGCCAGGGCAGAGGACAGAAGTACGGGTGTGCAG
TCGCAGCCGCTCAGTGCCTGGTTCCTCTACGGGCCGGTCGACGTCAATGCCACGTCGCAAGCTTTCGGTAACGGA
GACGAGCTCTTTGGCATCTTCCACGGCCTTCGGGATAATTGTTATAGGGGCGCTCGCGAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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