Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|73
Gene name
Location	scaffold_10:19102..21058
Strand	+
Gene length (bp)	1956
Transcript length (bp)	1884
Coding sequence length (bp)	1881
Protein length (aa)	627

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF07093	SGT1	SGT1 protein	1.0E-79	29	337

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O95905\|ECD_HUMAN	Protein ecdysoneless homolog OS=Homo sapiens GN=ECD PE=1 SV=1	24	613	3.0E-59
sp\|Q9CS74\|ECD_MOUSE	Protein ecdysoneless homolog OS=Mus musculus GN=Ecd PE=1 SV=2	24	613	4.0E-58
sp\|Q9US49\|ECD_SCHPO	Protein ecdysoneless homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sgt1 PE=3 SV=1	13	430	1.0E-44
sp\|Q9W032\|ECD_DROME	Protein ecdysoneless OS=Drosophila melanogaster GN=ecd PE=1 SV=1	26	610	9.0E-41
sp\|Q9LSM5\|ECD_ARATH	Protein ecdysoneless homolog OS=Arabidopsis thaliana GN=At5g65490 PE=1 SV=1	60	328	5.0E-34

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O95905\|ECD_HUMAN	Protein ecdysoneless homolog OS=Homo sapiens GN=ECD PE=1 SV=1	24	613	3.0E-59
sp\|Q9CS74\|ECD_MOUSE	Protein ecdysoneless homolog OS=Mus musculus GN=Ecd PE=1 SV=2	24	613	4.0E-58
sp\|Q9US49\|ECD_SCHPO	Protein ecdysoneless homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sgt1 PE=3 SV=1	13	430	1.0E-44
sp\|Q9W032\|ECD_DROME	Protein ecdysoneless OS=Drosophila melanogaster GN=ecd PE=1 SV=1	26	610	9.0E-41
sp\|Q9LSM5\|ECD_ARATH	Protein ecdysoneless homolog OS=Arabidopsis thaliana GN=At5g65490 PE=1 SV=1	60	328	5.0E-34
sp\|Q54JR9\|ECD_DICDI	Protein ecdysoneless homolog OS=Dictyostelium discoideum GN=ecd PE=3 SV=1	49	328	3.0E-29
sp\|Q9LSM5\|ECD_ARATH	Protein ecdysoneless homolog OS=Arabidopsis thaliana GN=At5g65490 PE=1 SV=1	551	615	7.0E-08

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 46	0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
SGT1

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|73 MPEEGQMKKDAEVANVDNQFSRRVLENSVEYWLFLLGGEKEDRAALEVIRQAAENLSQSLTKDYIWQRDHFQLEL REDDGMRCLYGVTDYGDAIEDEWLIVYMLRCLTDAHENLWVRVADADGEFLLIEAANVLPDWLSPETDQNRAWIH GGKLLIIPCTGDGTHEGQSQSISLPQALGFIRSRSLDLVHSPFVQEEAFYRLGKYPRHISDSTHCSLITIPRKLA YVLHSLPKSVSPAVEYFYLRDPISMRPILSTSTPLAFPPEDLVTVSVRFSRVLFAQLRSQRFEPPPGWQQVTRNS VSSANPYDKERSARAEMGMKLAIGFEILSAAAGQDKRKVVKQVEALVKELSEPGERLLPTDQDIQSWRDSHRDDD ETWMDINYEDFERELDGKPNNTTEENSGFGDTRTETDLRKIVSRFEAFLNDETAGLDGAELDDPRDGDDDDDDDD DDDDDEDSEFEDKVVGFDEQAFSSMMRTMLGLPVPDSSSAQAHAGRQTLARTGGGKANLQSQEDAEIQELSNQME NELQNCGALKYDDATEQRLAAGDGGSVGKGHEIKRRGSMSDTIEEENNGEEVQIDYNLARNLLESFKSQAGLAGP TGNVLGMMGLRLPRDEECEDGEDDQPG
Coding	>Ophio5\|73 ATGCCTGAGGAGGGCCAAATGAAGAAAGATGCGGAAGTTGCAAATGTCGACAACCAGTTCTCGAGGCGGGTGCTC GAGAATTCTGTTGAGTATTGGCTGTTTCTCCTGGGCGGTGAGAAGGAAGATAGGGCCGCTCTGGAGGTTATTCGT CAAGCCGCCGAGAATCTCAGCCAAAGTCTAACCAAGGACTATATCTGGCAACGTGACCATTTTCAACTTGAATTG AGAGAAGATGATGGAATGCGTTGTCTTTACGGCGTGACGGACTATGGTGATGCCATTGAGGATGAGTGGCTCATC GTCTACATGCTGCGGTGCCTGACTGATGCGCACGAGAACCTTTGGGTCCGCGTCGCCGATGCCGATGGCGAATTT CTACTCATAGAGGCTGCCAATGTGTTGCCCGACTGGTTAAGCCCCGAGACGGACCAGAACCGCGCTTGGATCCAC GGCGGCAAGCTGCTTATCATCCCGTGCACAGGCGATGGCACACATGAAGGGCAGTCTCAATCAATTTCTCTGCCA CAGGCGCTGGGTTTCATCCGATCGCGCTCTCTGGACCTGGTCCATTCCCCCTTCGTACAGGAAGAGGCCTTTTAC AGGCTGGGAAAATATCCGAGACACATCTCCGATTCTACACACTGCTCACTCATCACCATACCGAGAAAGCTCGCT TACGTCCTTCACTCACTTCCAAAATCCGTATCTCCGGCGGTGGAGTACTTCTACCTCAGAGACCCGATCTCTATG AGGCCAATCTTGTCTACTTCCACGCCGCTTGCATTCCCACCTGAAGATCTTGTCACTGTGAGTGTACGATTTAGC AGAGTCCTTTTTGCGCAACTCAGATCGCAACGCTTTGAGCCACCTCCTGGGTGGCAGCAAGTTACGCGAAATTCT GTGTCCTCGGCGAATCCATACGATAAGGAGAGAAGTGCTAGGGCTGAAATGGGAATGAAGCTGGCAATCGGGTTC GAAATCCTTTCTGCAGCCGCAGGCCAGGACAAGAGAAAGGTCGTCAAGCAAGTGGAGGCCCTAGTCAAAGAATTG TCGGAACCCGGAGAAAGATTGTTACCTACTGATCAAGATATACAATCGTGGCGGGATTCTCATCGCGATGACGAC GAAACTTGGATGGACATCAACTATGAAGATTTTGAGCGCGAGTTGGACGGCAAACCTAACAACACTACGGAGGAA AATTCGGGCTTTGGCGATACTCGAACCGAGACGGATTTGAGAAAGATCGTGTCACGATTCGAGGCCTTTTTGAAC GACGAAACTGCTGGTCTGGATGGCGCCGAACTTGACGACCCAAGGGACGGCGACGACGACGACGACGACGACGAC GACGACGATGACGACGAAGATAGCGAGTTTGAGGACAAAGTGGTCGGTTTCGACGAACAAGCTTTTTCTTCGATG ATGCGCACCATGTTGGGGTTGCCAGTACCGGATTCGTCATCTGCCCAAGCCCATGCAGGACGGCAGACCTTGGCG CGGACTGGAGGAGGAAAGGCAAACCTTCAGTCTCAGGAGGATGCGGAGATTCAAGAGCTTTCGAACCAGATGGAA AATGAACTTCAAAACTGCGGAGCGCTCAAATATGACGATGCAACTGAACAACGACTGGCCGCAGGAGACGGCGGG AGCGTCGGAAAGGGACATGAGATAAAGCGGCGCGGCTCGATGTCCGACACGATCGAGGAGGAAAACAACGGTGAA GAGGTCCAGATCGATTACAACCTGGCACGTAACCTATTGGAGAGCTTCAAGAGCCAGGCGGGCTTGGCCGGGCCA ACGGGCAACGTCCTCGGCATGATGGGTCTTCGACTGCCCAGAGACGAGGAATGCGAAGACGGTGAAGACGACCAG CCAGGA
Transcript	>Ophio5\|73 ATGCCTGAGGAGGGCCAAATGAAGAAAGATGCGGAAGTTGCAAATGTCGACAACCAGTTCTCGAGGCGGGTGCTC GAGAATTCTGTTGAGTATTGGCTGTTTCTCCTGGGCGGTGAGAAGGAAGATAGGGCCGCTCTGGAGGTTATTCGT CAAGCCGCCGAGAATCTCAGCCAAAGTCTAACCAAGGACTATATCTGGCAACGTGACCATTTTCAACTTGAATTG AGAGAAGATGATGGAATGCGTTGTCTTTACGGCGTGACGGACTATGGTGATGCCATTGAGGATGAGTGGCTCATC GTCTACATGCTGCGGTGCCTGACTGATGCGCACGAGAACCTTTGGGTCCGCGTCGCCGATGCCGATGGCGAATTT CTACTCATAGAGGCTGCCAATGTGTTGCCCGACTGGTTAAGCCCCGAGACGGACCAGAACCGCGCTTGGATCCAC GGCGGCAAGCTGCTTATCATCCCGTGCACAGGCGATGGCACACATGAAGGGCAGTCTCAATCAATTTCTCTGCCA CAGGCGCTGGGTTTCATCCGATCGCGCTCTCTGGACCTGGTCCATTCCCCCTTCGTACAGGAAGAGGCCTTTTAC AGGCTGGGAAAATATCCGAGACACATCTCCGATTCTACACACTGCTCACTCATCACCATACCGAGAAAGCTCGCT TACGTCCTTCACTCACTTCCAAAATCCGTATCTCCGGCGGTGGAGTACTTCTACCTCAGAGACCCGATCTCTATG AGGCCAATCTTGTCTACTTCCACGCCGCTTGCATTCCCACCTGAAGATCTTGTCACTGTGAGTGTACGATTTAGC AGAGTCCTTTTTGCGCAACTCAGATCGCAACGCTTTGAGCCACCTCCTGGGTGGCAGCAAGTTACGCGAAATTCT GTGTCCTCGGCGAATCCATACGATAAGGAGAGAAGTGCTAGGGCTGAAATGGGAATGAAGCTGGCAATCGGGTTC GAAATCCTTTCTGCAGCCGCAGGCCAGGACAAGAGAAAGGTCGTCAAGCAAGTGGAGGCCCTAGTCAAAGAATTG TCGGAACCCGGAGAAAGATTGTTACCTACTGATCAAGATATACAATCGTGGCGGGATTCTCATCGCGATGACGAC GAAACTTGGATGGACATCAACTATGAAGATTTTGAGCGCGAGTTGGACGGCAAACCTAACAACACTACGGAGGAA AATTCGGGCTTTGGCGATACTCGAACCGAGACGGATTTGAGAAAGATCGTGTCACGATTCGAGGCCTTTTTGAAC GACGAAACTGCTGGTCTGGATGGCGCCGAACTTGACGACCCAAGGGACGGCGACGACGACGACGACGACGACGAC GACGACGATGACGACGAAGATAGCGAGTTTGAGGACAAAGTGGTCGGTTTCGACGAACAAGCTTTTTCTTCGATG ATGCGCACCATGTTGGGGTTGCCAGTACCGGATTCGTCATCTGCCCAAGCCCATGCAGGACGGCAGACCTTGGCG CGGACTGGAGGAGGAAAGGCAAACCTTCAGTCTCAGGAGGATGCGGAGATTCAAGAGCTTTCGAACCAGATGGAA AATGAACTTCAAAACTGCGGAGCGCTCAAATATGACGATGCAACTGAACAACGACTGGCCGCAGGAGACGGCGGG AGCGTCGGAAAGGGACATGAGATAAAGCGGCGCGGCTCGATGTCCGACACGATCGAGGAGGAAAACAACGGTGAA GAGGTCCAGATCGATTACAACCTGGCACGTAACCTATTGGAGAGCTTCAAGAGCCAGGCGGGCTTGGCCGGGCCA ACGGGCAACGTCCTCGGCATGATGGGTCTTCGACTGCCCAGAGACGAGGAATGCGAAGACGGTGAAGACGACCAG CCAGGATGA
Gene	>Ophio5\|73 ATGCCTGAGGAGGGCCAAATGAAGAAAGATGCGGAAGTTGCAAATGTCGACAACCAGTTCTCGAGGCGGGTGCTC GAGAATTCTGTTGAGTATTGGCTGTTTCTCCTGGGCGGTGAGAAGGAAGATAGGGCCGCTCTGGAGGTTATTCGT CAAGCCGCCGAGAATCTCAGCCAAAGTCTAACCAAGGACTATATCTGGCAACGTGACCATTTTCAACTTGAATTG AGAGAAGATGATGGTGTGTCACTGCTATCTATTTGTCTCGGATTCTCCTCAAGCTTGCGCTGCGAGCTGACCATG AGTTGAAAAGGAATGCGTTGTCTTTACGGCGTGACGGACTATGGTGATGCCATTGAGGATGAGTGGCTCATCGTC TACATGCTGCGGTGCCTGACTGATGCGCACGAGAACCTTTGGGTCCGCGTCGCCGATGCCGATGGCGAATTTCTA CTCATAGAGGCTGCCAATGTGTTGCCCGACTGGTTAAGCCCCGAGACGGACCAGAACCGCGCTTGGATCCACGGC GGCAAGCTGCTTATCATCCCGTGCACAGGCGATGGCACACATGAAGGGCAGTCTCAATCAATTTCTCTGCCACAG GCGCTGGGTTTCATCCGATCGCGCTCTCTGGACCTGGTCCATTCCCCCTTCGTACAGGAAGAGGCCTTTTACAGG CTGGGAAAATATCCGAGACACATCTCCGATTCTACACACTGCTCACTCATCACCATACCGAGAAAGCTCGCTTAC GTCCTTCACTCACTTCCAAAATCCGTATCTCCGGCGGTGGAGTACTTCTACCTCAGAGACCCGATCTCTATGAGG CCAATCTTGTCTACTTCCACGCCGCTTGCATTCCCACCTGAAGATCTTGTCACTGTGAGTGTACGATTTAGCAGA GTCCTTTTTGCGCAACTCAGATCGCAACGCTTTGAGCCACCTCCTGGGTGGCAGCAAGTTACGCGAAATTCTGTG TCCTCGGCGAATCCATACGATAAGGAGAGAAGTGCTAGGGCTGAAATGGGAATGAAGCTGGCAATCGGGTTCGAA ATCCTTTCTGCAGCCGCAGGCCAGGACAAGAGAAAGGTCGTCAAGCAAGTGGAGGCCCTAGTCAAAGAATTGTCG GAACCCGGAGAAAGATTGTTACCTACTGATCAAGATATACAATCGTGGCGGGATTCTCATCGCGATGACGACGAA ACTTGGATGGACATCAACTATGAAGATTTTGAGCGCGAGTTGGACGGCAAACCTAACAACACTACGGAGGAAAAT TCGGGCTTTGGCGATACTCGAACCGAGACGGATTTGAGAAAGATCGTGTCACGATTCGAGGCCTTTTTGAACGAC GAAACTGCTGGTCTGGATGGCGCCGAACTTGACGACCCAAGGGACGGCGACGACGACGACGACGACGACGACGAC GACGATGACGACGAAGATAGCGAGTTTGAGGACAAAGTGGTCGGTTTCGACGAACAAGCTTTTTCTTCGATGATG CGCACCATGTTGGGGTTGCCAGTACCGGATTCGTCATCTGCCCAAGCCCATGCAGGACGGCAGACCTTGGCGCGG ACTGGAGGAGGAAAGGCAAACCTTCAGTCTCAGGAGGATGCGGAGATTCAAGAGCTTTCGAACCAGATGGAAAAT GAACTTCAAAACTGCGGAGCGCTCAAATATGACGATGCAACTGAACAACGACTGGCCGCAGGAGACGGCGGGAGC GTCGGAAAGGGACATGAGATAAAGCGGCGCGGCTCGATGTCCGACACGATCGAGGAGGAAAACAACGGTGAAGAG GTCCAGATCGATTACAACCTGGCACGTAACCTATTGGAGAGCTTCAAGAGCCAGGCGGGCTTGGCCGGGCCAACG GGCAACGTCCTCGGCATGATGGGTCTTCGACTGCCCAGAGACGAGGAATGCGAAGACGGTGAAGACGACCAGCCA GGATGA

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