Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|7286
Gene name
Locationscaffold_696:8003..8399
Strand-
Gene length (bp)396
Transcript length (bp)264
Coding sequence length (bp)261
Protein length (aa) 87

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P0C5R9|YP17B_YEAST Uncharacterized protein YPR170W-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR170W-B PE=3 SV=1 1 79 4.0E-24
sp|P0C5R7|YP169_YEAST Putative uncharacterized protein YPR169W-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR169W-A PE=5 SV=1 1 67 6.0E-14

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 55 77 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|7286
MKPLVSAMHAWSCTVISVFAIVILSVLGSLYRSGHEEFVGGREDPEDGKAVSGTIFTAVFVYIAFLVFCGFQGLL
HIRENRRGAITL
Coding >Ophio5|7286
ATGAAGCCCCTCGTCAGTGCCATGCACGCTTGGTCGTGCACTGTCATCTCTGTCTTTGCCATAGTCATACTCAGC
GTCCTTGGCAGTCTCTACCGCTCCGGGCACGAGGAGTTCGTTGGCGGCCGCGAAGACCCCGAAGACGGCAAGGCT
GTCTCGGGTACCATCTTCACCGCCGTCTTCGTTTATATCGCTTTTCTCGTCTTCTGCGGCTTCCAGGGCCTGCTT
CACATCCGAGAGAACCGGAGGGGCGCCATCACTTTG
Transcript >Ophio5|7286
ATGAAGCCCCTCGTCAGTGCCATGCACGCTTGGTCGTGCACTGTCATCTCTGTCTTTGCCATAGTCATACTCAGC
GTCCTTGGCAGTCTCTACCGCTCCGGGCACGAGGAGTTCGTTGGCGGCCGCGAAGACCCCGAAGACGGCAAGGCT
GTCTCGGGTACCATCTTCACCGCCGTCTTCGTTTATATCGCTTTTCTCGTCTTCTGCGGCTTCCAGGGCCTGCTT
CACATCCGAGAGAACCGGAGGGGCGCCATCACTTTGTGA
Gene >Ophio5|7286
ATGAAGCCCCTCGTCAGTGCCATGCACGCTTGGTCGTGGTACGTCTGCTCCAACCAAGACAAAACAACAAGCCGC
AACACCGGGTCTTCAGAACTGACATGACTCGTCGGGAAAGCACTGTCATCTCTGTCTTTGCCATAGTCATACTCA
GCGTCCTTGGCAGTCTCTACCGCTCCGGGCACGAGGAGTTCGTTGGCGGCCGCGAAGACCCCGAAGACGGCAAGG
CTGTCTCGGGTACCATCTTCACCGCCGTCTTCGTTTATATCGTACGTTGCCCGGCGATCCTCGAGTCCATGAATA
CGACCGACTGACGAATTGCAGGCTTTTCTCGTCTTCTGCGGCTTCCAGGGCCTGCTTCACATCCGAGAGAACCGG
AGGGGCGCCATCACTTTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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